Array 1 82956-83570 **** Predicted by CRISPRDetect 2.4 *** >NZ_FNPI01000002.1 Evansella caseinilytica strain SP, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ========================================================================================== ================== 82956 32 100.0 33 ................................ TTCGGCTTGCTTGCGCTTAAGTTCGCGCGCCGT 83021 32 100.0 33 ................................ TGAGTAATTCGCCCGATGTCTCGTCGGACGAAC 83086 32 100.0 35 ................................ AACATCTGCCGCAATAGGTGACACCACTAAAGCAT 83153 32 96.9 34 ...........A.................... ACCCAACGAAACCGAATCCATGTCAAAAAAATTC 83219 32 96.9 32 ............A................... CCGTAGGTTGCGCGTTCGGTCTGCGATGGCAT 83283 32 75.0 90 ...........TAC..CCA...AA........ TCTCCTAAAAATTCCATTTACCCCCATCGCTTCCGGCTGTACTAAACTGGAGTGCGCGAACTTCTTGATCAGTCTGTTGTGCTGCCGCCC 83405 32 84.4 34 .......A.CTGA................... TTTTCTCAATGTACCGTATTGTAATATTAATGCC 83471 31 81.2 37 .......C..TTA......T.....-...... CATTTAGTCAGATGCGGCTATGAAAAAGCTGGCATCA 83539 32 81.2 0 .........C.T.............AG...TG | ========== ====== ====== ====== ================================ ========================================================================================== ================== 9 32 90.6 41 GTCGCACTCTACGTGAGTGCGTGGATTGAAAT # Left flank : AGCTGTACTTCATCGAGACGCTGCGAGTTGTCTCATCGTGTCATCGCGCGCGATGGCACTTGGATAGACGTCAGAGGAATACTGGCAGAGGAAGAGACAATGGAGTGGAGCCGATGCATTCTTTTCCAGTCAGCTAGGAGTGGTTTTCTCGGAACCAGGATGGTGACATTCCGCTGTTGCTCACAGGACGTGAGCGGTAATTAGACGGAATTGGGGCGCAGCGAGCGGAACCATTGCCTTTTAAATACGCTCATCTAGGATTAACTTTTGAAGAGGAATTCACTAAAGCTGGAAAACCGTGCAGGCAAATTTCATCGTTACGTTGTCTCTCTGGTGCGAACCCTAAGCGCACATAAAATCTCTGGGGGGTTCGCACTTGTTGATATGACTGGATTTCTAATGCAATTGATAGCGTAAAATTCCAAAAATTGTAAACTAAAAACAGGTTCGCACTTTTGCCCTGGTTGATCCTTGAGGGACAAGGCTTTCACCAGGGCGCT # Right flank : GGGAATAATAATGAAGCGAATCTATTTGGACCATGCTGCAACGTCGCCTCTTCATCCCGATGTCCTTGAGGCGATGAAGCCTTATTATGAAACGGTATTCGGCAACCCGTCCAGCATACATTCCTTTGGCCGGGAAGCGAGAAGAGGACTGGATGAATCGCGGGAGTTTATTGCTAAGGCAATCGGTGCCTCGTTTGACGAAATCATTTTTACAAGCGGGGGGACAGAAGCGGACAACTTGGCGATTTTTGGCAGCGCTTTTGCGAACCGAAGCCACGGAGAGCATGTGATCACGACAAAAACGGAGCATCACGGCGTTCTGCATGCCTTTCAATATTTGGAAAAACAAGGGTTTGAAGTGACTTATTTAGATGTGGACAGAAACGGCAAAATTTCTGCGGAAGATGTACGAAAAGCGTTGAAAGACAATACCGTTCTCGTCTCTGTCATGTACGGTAACAATGAAGTCGGGACAGTGCAGCCGATTCAGGAGATCGGCA # Questionable array : NO Score: 7.78 # Score Detail : 1:0, 2:3, 3:3, 4:0.53, 5:0, 6:0.25, 7:-0.59, 8:1, 9:0.59, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTACGTGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,9] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.60,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-25] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [45.0-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0.64 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 6451-7344 **** Predicted by CRISPRDetect 2.4 *** >NZ_FNPI01000006.1 Evansella caseinilytica strain SP, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 6451 32 100.0 34 ................................ TTGTATTTAACGGTGTCGTTTTATTCCCTTTTCC 6517 32 100.0 33 ................................ CGTTATGTCATCAACCAACTCACTTGCAAGCTT 6582 32 100.0 33 ................................ TAGGACGTCCTGTGTGCCGCCTGCTGGGATGTT 6647 32 100.0 33 ................................ GCTTTCAGGTGCTCGAAAGCTTTATTAATGTCT 6712 32 100.0 33 ................................ CGTTGGAAAATGTGCAATAAATTCTGGTTCTAG 6777 32 100.0 36 ................................ GTAAAATCCTTTGTCGTTCAATTCACGTATGATCAT 6845 32 100.0 34 ................................ GCACCGTACGCATAGGGGGTGCTTATTTAAAAAA 6911 32 100.0 35 ................................ TTTTTCTGCCCGGTTTACCCGCACCCCCTACGGTA 6978 32 100.0 35 ................................ CCTCTATCATTTCTGCTTCACCCACCAGCTCGCTT 7045 32 100.0 34 ................................ TCGAACTAGAAAAAGAGGTTAATAAACTAAAAAA 7111 32 100.0 34 ................................ TTATCAATGCTGAAACGTTAAAGAATCCATACAG 7177 32 100.0 34 ................................ CACAACGTAATCAGCCAAGTTTGGCTGCTCAAGC 7243 32 100.0 35 ................................ TTTTTAGGCTTAGTTGGGATTAAAATCGTTTCAAC 7310 32 96.9 0 .......................A........ | AA,C [7331,7334] ========== ====== ====== ====== ================================ ==================================== ================== 14 32 99.8 34 GTCGCACTCTACATGAGTGCGTGGATTGAAAT # Left flank : TATTAGCCAAAATCGAAGAGCCGCTGAAGAAGCCTTATCAAACGTCGACGGGGTTTAAAATGGCAACGGTGGCTGAATGCTTAAGCTTTAATCTCTTTCATGAAGGAATGCATTTTGCTGCAATCAAAAACATTAAGCAACTACTGGCGGCTGCTGAATCATAGGTTACCAGGGGTTTCGCCAAGTGCCTGGGAAGCGGAAGCCGATTGGAGGGGGATGACCTTTCTTTTGATAAACGGATAGTATCTGGTCATCAATAGTGGTGCGGGCAAGGAAGAAAAATCGAAGGCGATCGTTGACCGAAGGATTGCTGTTGAAGGTAGATGTCCGTGGTGCGAACCCCAAGCGCACATCAAATCCCTGGGAGGTTCGCACCTGTTGATATGACTGGGTTTCTGGAGAAATGTATAGCGAAAAATGACAAATTGTAGTAATCTAAAAACAGGTTCGCACTTTTGCCCTCTTGAAGCCTTGTAGGGCAAGGCTCCGCGTGCGGCGCT # Right flank : TGCGCCATGAAGAAAAACGAGACATACTCCTCATCTAATAAACAGGTGAGGAGTGTTTGTTGTCCCGCCGTTCCTGTAGATTTGATGGAATCCCCCTGCTGCAACAGCCTTTTTTTGTATAACTACTTTACCTGTCGTAGTAGTTATGTTACAGTGGGATTACTACGACAGACGAAGTACGACTATCGCAGTAACATCTCCTCCTTTTTACTGAATCGCAATGGAGGACTGCGCCAGCCGTATCACGATAGACAAACACGACAGCAATGCTTCCCGCACCACTTAAAAAGGCAGTAATTCCGCTAAAGGCACAGGCACTGGCAATGGGAACGCACCAATTACTCGCTTAAAAAAACAGCACGTTTTCATCTATCCCATTGCATTGAAATGACGAACCCTCTCTAATGCAGTAATCGCCGCGGAAGGAAGGAGAATATGATTGATCAGCAGTGATGTCATTCGAGGTTATAATGATACGATTATTCTTTATTTGCTGTTGG # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTACATGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: F [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.00,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [40.0-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0.27 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 134546-135777 **** Predicted by CRISPRDetect 2.4 *** >NZ_FNPI01000011.1 Evansella caseinilytica strain SP, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ======================================= ================== 134546 32 100.0 36 ................................ CTCGACGTCCTCGCAATCAGTGGGAATAATATCGTC 134614 32 100.0 35 ................................ ACAAGGACACTTCCGGATACAAATACAAGTATGTC 134681 32 100.0 34 ................................ ATTAAAGTTTTAATCTTTTTTGTGATAGCTCAAC 134747 32 100.0 34 ................................ CATGGTTATTACCACCTTTGATGCAAACAAAAAA 134813 32 100.0 33 ................................ TCATAAAAAGAGGTCAGTTCCTTCGATCCTATC 134878 32 100.0 34 ................................ GGCATTGACCTATTCTGAGCGCTATTTCCTCCTT 134944 32 100.0 34 ................................ AATCCCAACCTCAATTTTTAGCCCATTGCTAGTT 135010 32 100.0 35 ................................ AGATCGTTGACTATCGTCAGTGTAATGACCGTTTT 135077 32 100.0 36 ................................ TTTTCTGCTGTCGGTTATCTTTAATATCTCGCCTAG 135145 32 100.0 39 ................................ ATGTAAGTACTTCATTACCCTGTAGATTTGTTCATTCAC 135216 32 100.0 34 ................................ CCCTGTGCGCGCGTCTTGCAATAATACGTTATCT 135282 32 100.0 33 ................................ AACTCTTCTTCATCGACAACAACGCCCTTATAA 135347 32 100.0 36 ................................ AATTAATCCATGTTCCCATGGTGATAATGGATATCG 135415 32 100.0 36 ................................ TCTGAATAAAGTAGATTGGTCGTGAAATCAGCATAT 135483 32 100.0 34 ................................ CTTCTGCTTTAGTTGCATTTTCCAGCATTTTGTC 135549 32 100.0 33 ................................ CCTGTGTTTTGGCAGCAAGTATAAATTGAGCGC 135614 32 100.0 35 ................................ GCGTATCGCCCGACGCTGTTCCGCCCGCGTAAGAT 135681 32 100.0 35 ................................ AGACACAGAAAAACGCCGTTTGGAATGAGGTTATG 135748 30 84.4 0 ......................A.--C...C. | ========== ====== ====== ====== ================================ ======================================= ================== 19 32 99.2 35 GTCGCACTCTATATGAGTGCGTGGATTGAAAT # Left flank : ACTATCCACGGGAAAGCTTGGAAAGTACTTCAAAAGGCATCTTCCCGCGCGATACTGGACTATGTACAAGGCTACTTTTGCAAACAGCGACGACGAACAAATGTGGGAATCGATGTTTACCGCATGCGAGCTGTTTCGAGCATTAGCAAAAGAAGTGGCAGCAGCATTTTCATACGTCTATCCGGACGATGACGACCAGAACATGACGGACTACTTGTATCGGGTGAGAAGTCTGCCTGCCGATGCGACGGAAATGTAAGGGGAGGGTGGTTTGTAGTTAAGGGAAGTGACACACCTGCTTTTTGATAGCGAGAGGGAATAATTCCCTTTTGGTGCGAACCCCAAGCGCACACCAAATCCCTGGGGGGTTCGCACCTGTTGATATGACTGGGTTTCTTAAAAAATTGATAGCGAAAAATACCAAATTACGGTAAACTAAAAACAGGTTCGCACTTTAGCCCACTGGAAGCCTTGTGGGACAAGGCTCCAATCCGGGCGCT # Right flank : TCGCTGGGAATGAGTCCAGTCAAATCAGTACGACACAAAAAATGCCGGTTTCAGGCTCGCTCAAACTTGTGAAAGCTCGAAAACGGGATCTGGTCAAATGATTGCGGCTTAGCGGAAATGTTTTTTGATAATAATAGTTTCTTTGGTTTTAAAACTAGACAGGGGAGTAAGCGAATGGAGCTAGGCACACCTATTGCAGAGGGAAACACGGCAAAAATCTATCTTGTCGAAAACAAGATTGTAAAAGTGTTCAAGGATCATTTGCCCGATACGGAAGCAGCAAATGAAGCAAGTAAACAAAAATACGCCCATTCGTGTGGACTGTCTGTGCCTGAAATTTTCGCTGTCACTGAAGTCAATGGAAAACAAGCAATTATGATGGAATATATCAACGGGAAAACAATCGGAGATATCTTCTTCGAAAATAAGGAACGAGCAGAATATTATATGAGTATTTCCGTTGATATACAGCATCAGATTCATTCGAAGATAGCTGACTC # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTATATGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.25%AT] # Reference repeat match prediction: F [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.40,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [41.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0.27 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 136991-137554 **** Predicted by CRISPRDetect 2.4 *** >NZ_FNPI01000011.1 Evansella caseinilytica strain SP, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 136991 32 100.0 37 ................................ CTATACAAGGAGGGGATAGCGTGAATGAAGCTCCGTC 137060 32 100.0 34 ................................ AGCTGTTTGTTTGTGCTCAGCCTAGTTGCAATAC 137126 32 100.0 35 ................................ CACTTAAAAATAAGCGTTCCATTAGGCTTCAAAAC 137193 32 100.0 34 ................................ TTTTGCCAGCTCCGCCATAATTCCAGTTCCTGTG 137259 32 100.0 34 ................................ TCTCCTGTGTGCCAGTTCGCATATCCTTCAGAAC 137325 32 100.0 33 ................................ TTAGAAAAGCAGTGACTGAAAGTCAAGCTATGA 137390 32 100.0 34 ................................ ACACATTTTGGTGTGCAACGTAAAATATAGTGGA 137456 32 100.0 34 ................................ ATCAATGATCCCGCATTGTGGGTTGTACCCATCC 137522 32 90.6 0 ........................T..TC... | C [137546] ========== ====== ====== ====== ================================ ===================================== ================== 9 32 99.0 34 GTCGCACTCTATGTGAGTGCGTGGATTGAAAT # Left flank : GACATTTGCCGCACGTATCTTTTATATTCCCCGTTTTCCGCAGAGTTAGCCGATATGTATTTACATCTTTCTTGCAAAAAAAGCGGTTTGTCTCAGGCTGATATTTTTCGCTGGGCGCCAATCATAGCAGGAGCAAGGCTGTCAGAAATGGTTATATCAGAGAAAGCGGAACGCCTGATTGAAATAGTAAAGCAGCATTTTCCCTGCTAGCTTGAATGCAGGTACATCAGAAGAATGTCCGCTGTTTATTATTATGGGTGTGTACAACGAAAGAAATCGCCAGGGAGTATCATGCTGCTATTGATATTTTAGCAAAAAAAGTCACCTCATCTGGTGCGGACCCCAAGCGCACATCCAATCCCTGGGAGGTTCGCACCTGTTGATATGACTGGTTTCTTAAAAAATTGATAGCGAAAAATGCCAAATTACGGTAAACTAAAAACAGGTTCGCACTTTAGTCCACTGGAAGCCTTGCGGGACAAGGCTCCAATCCGGGCGCT # Right flank : TCATCCCAAGGAATAGAAAGCCCTTCATTTGTGGATAAAAGGATGTTTCTCCCACAACGATTCTTCTAATCGCTAGATAATATAATGAGAGACTGGTTGCCAGATCTGCTTACAAGATGACGAATAAAAAATGTAAAAAAAGTATTTTCATAACATCCTCAGTGTTACCCCATTCCGTTGCCATCGCACCCCAACAACAAAACAGGACTATTTTTCGACATCAACGCTTGTGATTGCTGGGCCTTTTGAAATAGTTCCATTACGGAAACTGGACGAAAAGAAGGGAAATCTGTCTATTTTCCATAGCTTTATCTTTTTTATATGGTAAAATGTTCTATGAATAACAATATCTCTTAGAGGGGATTTGACGATGTATATTGCCCATGTCCGGGAAGCGGATAAGCAGGTACAAACATTGAAAGAACATTTGCTTGAAGCGAAACAATTGGCAGAGTGCTACGGCGCAAAGCTGGAATTAACACATGTTGCTGGTTTAGCGG # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTATGTGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: F [matched GTCGCACTCTTAGTGAGTGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.80,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [41.7-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0.27 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 3 146875-147433 **** Predicted by CRISPRDetect 2.4 *** >NZ_FNPI01000011.1 Evansella caseinilytica strain SP, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 146875 32 100.0 33 ................................ GGTTACCAACATGTTTTAAAACATGGCCGAGCT 146940 32 100.0 34 ................................ GGCATAACTTAATCCCCGTGCTACCAGGTCCTTG 147006 32 100.0 34 ................................ GTTGTGAAAAATGCGATTACTGCCGGATGAACAA 147072 32 100.0 34 ................................ TATATCTTCATTATACACCACCTGTTGTAACTTG 147138 32 100.0 34 ................................ TATATCTTCATTATACACCACCTGTTGTAACTTG 147204 32 100.0 33 ................................ ATATCCGCAAAAGCATTTCGTTAGTCCAGAAAG 147269 32 100.0 34 ................................ GTCATATAACGACACTCCTTTCGAGATTATTTAC 147335 32 100.0 35 ................................ ATTTGGATGGAGTCAGTATCGATGGCAGCATGAAC 147402 32 93.8 0 ..........AT.................... | ========== ====== ====== ====== ================================ =================================== ================== 9 32 99.3 34 GTCGCACTCTTCATGAGTGCGTGGATTGAAAT # Left flank : GTTGATGTGCGGTGGTCTGTTATGACGGGATAAGAAGGAGCTTAGGAGCAGCAGCGGGTATTTACGAGTTTGGGCAAGCGAGTGTCGCGTTTGAATGAAGCGCCAAAGGAAAAGGAGTATTTTGGGGCTTCAGCAAGTAGATGTGGTTCTATAAACGAAACGATGGAGAAATCAAGAAGTGAAGAGAAGCGAATATTTACGAGTTTGGGCAAACTGGTGTCCCGACGTTTGAATGAAGTGCCAAAAGGAATGGAATATTTGTCTTTCATCGTCTTGGTAAGGGGATGCCACACTTTGCAGAATGGATTCCCGTTTTTGTAATTCTTGCAGTGGTGCGAACCCCAAGCGCACATAAAATCCCTGGGAGGTTCGCACCTGTTGATATGACTGGGTTTCTTATAAAATTCACAGCTAAAAATGGAAAATTACAGGTAATTTAAAATGGGTTCGCACTTTTGCCACTTTGCCCCCTTGAGGGACAAGGGGGCACTGCGGGCGCT # Right flank : TAATCACTAACCTGTTGTCTGAAATGTATTCAGCCGGTCGGGTGCGTGGGTTGAAATAAACTCTTTGAGGGTGCGTACTGGTGTGTATACGTCGCACTCTAATATTGTACTCTAGTTGTGTAGGGTGAAGTCCAACGTTATAAAAGCTTCAGATTGTAAGTGAGGGAAGAGAATAGACGAGTTTTTCGTAACTTTATCTCTTTCTTGTGGTGGTACATTGTTAATGTTAATAAAATATGCAACTTGAAATGGGTCTTTGTACTCTAGTTTCTGGATGTAACTACTTTTTTTATAGGCTTTTTTTATCGTTGACAGCAAACTTATGGTATAATTAGTGCAAATTTGATAAATTATTCTGATTTTAGCTAAAGGAAGATCTAATGTGTTTGAACATATGAAAACTCTAACTTTACGAGCAACTTTTTCTGCTTTAGGTAGTGGGAGGTTGCCTCCTTACTTAGGATCAACGATACGAGGCTTGCTTGGTCACTGCATTCGAG # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTTCATGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: F [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.70,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [38.3-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0.27 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 4 159145-159640 **** Predicted by CRISPRDetect 2.4 *** >NZ_FNPI01000011.1 Evansella caseinilytica strain SP, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 159145 32 100.0 35 ................................ GTCTATCAGACCCATCTCGTAAAGGTCGTGTTTAT 159212 32 100.0 34 ................................ TTTTATTTTTATTTCAACCCTCGGTGTTTCGCTG 159278 32 100.0 35 ................................ TTCGATAGCGCAAAAAGGAATAAAAATCCAGAAGG 159345 32 100.0 33 ................................ TTTTATGACGAAAGGTTCCCGAAATTTCGGCTA 159410 32 100.0 36 ................................ CTCACTCGATCCACCATCCTTTATACACCGCGCCCC 159478 32 100.0 34 ................................ AACAGTATGGTAATATTAAAACAAGAAAATGCGT 159544 32 100.0 33 ................................ ACCGAGGTTAAATCCCTCATTGAGATTGAATAA 159609 32 93.8 0 ..........................AT.... | ========== ====== ====== ====== ================================ ==================================== ================== 8 32 99.2 34 GTCGCACTCTACATGAGTGCGTGGATTGAAAT # Left flank : TCACGACATTATCCATCGCGAGGTGTATAACCAAATTCCACCCAAAGTAGAGTACTCCATTACGGAATACGGGCAACAGTTGACCCCTTTATTGCAGGCCATGAATGATTGGGGGACGGCGCATATCGCCCATTTACAGGAGTTGTATGGAGAAGAGCATTCGGCGAGATCGCTAAAACGTAATTGAATAACTCAAATTTGGGAAGGATTTGCTGCCAAGCACATGCCCTTGAAGAAATGACATCTACCCATAGAAACAAAGATTTAGAGAGTGAGTGTTCATTTGATAGAAAAATAAATCAAGGTGAAAAAAGGAAGAATGAAATTGACTGGTGCGAACCCCAAGCGCACATCAAATCCCTGGGAGGTTCGCACCTGTTGATATGACTGGGTTTCTTATGAAATGCATAGCATAAATTTCCAAATCATAGTAATCTAAAAATAGGTTCGCACTTTTGCCACTCTAACCCCTTGAGGGACAAGGCTTCGGTGCGGCCGCT # Right flank : TGCTATGAGTACCTAATTTGAAATGGTTTCCTTGACATAAAGTGAAATCAGCATTAAAATAAAAGTCAGTCAGTACTGACGTTATTTTGAGGGGTTGGACGGGAAAATGGTCTCTAGTCGAAAGCAGATGACATCTGAAAAAATTATTGATGCAGCGATTGAGCTGTTCTCGCGGAATGGATACGAAGGGGTTACGACTGAAGAAATTGCTGCGGAGGCCGGTTTCAGTGAGAAAACGTTATTTCGTCATTTCAAAAGCAAGCAAAATTTATTGGAACAGGCGATTGACCGCTATCATTATGCTGATGAAATGCGCGCTATTTTTGACAACAAGCTCAGTTGGAATTTAGAAGAGGATCTGTCGTTGATTAGTGAAAATTATCATAGAATTATGTATCGCAACCGCAAGATGCTGCAAATTATTATGAAAGTCGGAAAAAATCTCCCCGGCCTTCATCAATATGCGCATCGGCATCCGCAAGCATTGCAGGAATATTTAA # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTACATGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: F [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.00,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0.27 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 5 161927-162223 **** Predicted by CRISPRDetect 2.4 *** >NZ_FNPI01000011.1 Evansella caseinilytica strain SP, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 161927 32 96.9 34 T............................... GCTTTCTCCTCTTTCTTTTGCCCTTCCAATTGCA 161993 32 100.0 34 ................................ TTAAACAACTGGTCCATGTAGGAGGAAAACGGAT 162059 32 100.0 35 ................................ ATTCACCATCCTCTTACTGCGCATAATCTCTCAAC 162126 32 100.0 34 ................................ TCTTTTGCTTTTTTTAACCGTTCTTTGTTTGTCA 162192 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ =================================== ================== 5 32 99.4 34 GTCGCACTCTATATGAGTGCGTGGATTGAAAT # Left flank : TTGCTTGTTTTCTCATTTTGGGCAATGTTGGGCAATCGTTTCTTTCGATTGCCATGTCAAGATCGATTTCGTTCACATTGCCGGCTGAGCATACCGGTATCGGCATGGGATTGTTAATGATGCAAAACTTTATTTCAGGTTCTATTGCCATTGGCATTTATGGCCGGATCATTGACGTGGAAGCAGAGCAGTTATGGAACCCGCTGTCATTTTCATCCGTCGGCGCGGTGTACAGCAATCTCTTTCTGGCATTGGCGCTCCTCCATGTCGTTGTTTTCATCACATATAGATACAGCATCAAAAAAATAAGCCGGCAAAATTCTGAACGATCAAGTGCGAACCCCAAGCGCACATAATATCCCTGGGAGGTTCGCACCTGTTGATACGACTAGGTTTCTTATGAAATGTATAGCGAAAAGTGCCAAATTGTAGTAATCTAAAAACAGGTTCGCACTTTTGCCCTCTTGAGGCCTTGCAGGGCAAGGCTTCGCGTGCGGCGC # Right flank : TATCAGCGACTTGTAAATCGACCTGCCAATGTTTGGCGCACTCTTCATGGAAACATCCTGTGCATCTGATGAATAAAACATCGAAATACAGGCAGACAAAGACACTCCGATGGCACGTCGGAGTGTCTGCTTTTTCAATATATCAGCAACAAAAATCCTTATCACTGAATAAAATTAAGTACTTGGAATTCGTGGTGGCATAATTGTCTTCCCCCATCGATCATCAAACATTTTTGACGAAAAAACAACCGCCGGGGAGAAAGCAGCTTTACAGCTTGCTTTCCCCTGTTGACAGCCTGTTTTCATAACCTGGCCGATTGCGAATGGTTCCTTCCCTCGGCTTTCAACCCAGCACAGCAGCGACCTTTATTTAAGATAGTCATTTCCCACACGGTTTTCTGGCTGATTCCCTTTGAAAACAACGCTCTCATATCAACAAAGCCGGTCGGGACGGGGTTGTCAGAACGCCCCAGAAAACAGCGCTTACCCTTGGCTGCCTT # Questionable array : NO Score: 9.03 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTATATGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.25%AT] # Reference repeat match prediction: F [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.40,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [38.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.37,0.68 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 6 170834-171524 **** Predicted by CRISPRDetect 2.4 *** >NZ_FNPI01000011.1 Evansella caseinilytica strain SP, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 170834 32 100.0 34 ................................ TTGCCAGTTCCTTCGCGCAATACATGCCCATTAG 170900 32 100.0 33 ................................ AATATCGGCAGGGATGATGGTATATCTCGTCAA 170965 32 100.0 34 ................................ TAATTTACCGTTTATAAATTTTTGATATCTTGTA 171031 32 100.0 34 ................................ GATTTTACCGTACGTTTGACGTTGCACGGGAACG 171097 32 100.0 35 ................................ TGTAGCTTTAGCTTCATCGCTGTTCATCAGCTCAT 171164 32 100.0 33 ................................ ATGATGAAAGAAAAAGAATTGACCGCCAGAGAA 171229 32 100.0 34 ................................ AAAGATTACGGATTGAGTGCTACTGCCCTAAATA 171295 32 100.0 35 ................................ AAAACCATCCCGATCCCGTCCGCCTTTTCTTCAAT 171362 31 96.9 33 ........................-....... ATTGTGTCACCTCCTTTACCGCTGTCTTTATTA 171426 32 100.0 36 ................................ GGATATTGGTACATTGCCACCCGTGCCAAGGATTCC 171494 31 84.4 0 A.T............-.....A...G...... | ========== ====== ====== ====== ================================ ==================================== ================== 11 32 98.3 34 GTCGCACTCTTCATGAGTGCGTGGATTGAAAT # Left flank : ATACGATCGGATTAAAGCTGACCGACACCACTACAGGCGGCAGCTCCGACGCCTCGTTCACGTCGGCATTAGGCATCCCGACGATGGACGGCCTCGGTCCGGTCGGGGGCTACCCGCACAGCGATAAGGAGTATTTGGAAGTGGACACGCTGCAAGAGCGGGCACTGCTGTTGGCGAAAGTCATCGAGCGGTTGTCGGAGGAAAGGTCTTCAACATAAAAAGGTGAAGGTTATTCCTGCGAATCGAAGGCCTGGCAGCGGCGGCGCAAGCAAAAAAAACAACGCTGTGGTCACAGGAAAAGGAACTTGCTTATATATAAAGCATCGTGGCTGGTGCGAACCCCAAGCGCACATCAAATCCCTGGGAGGTTCGCACCTGTTGATATCACTAGGTTTCTGAGGAAATGTCTAGCGGAAAATGCCAAATTGTAGTAATCTAAAAACAGGTTCGCACTTTTGCCCTCCGGAACCCTTGAGGGACAAGGCGCCAAACCGAGCGCT # Right flank : TATTGAGTTATAATAAGGAAACATTATGGAAAAGAGGTTTACAATGCGCCAGTGCTTGTTTTTGCCAATCGTTCATAATGATTTTTTTCTAAAGTTAGTTATCTGACTAACTAACTTCCTTCCTATTGATTTAAGCAGCTGTATTTTTTTCTAAAGCGGTGGTTACATACAGAATTCATCGTTGCCAGTGGCAGGCTTTATTTACTTAACAGGAAACATCCTTATAGGATAACATTTGAAACATTTTTGAAAGGGGTTATTTCAGCATGGCAAAACCTAATGTTGTGACGAAAGACGAATTAATCGAAGCAGCTAAGCGCTGTATTTTGGAAAAAGGAATTCATCGTTTGACCTTGAGATCGGTTGCGGAGGGAGCTGGAGTAACACAAGGAACCGTGTATTATCATTTTGGAAGCAAGGATCAGTTGATGCTTGAAATTGTAGAAAACATGTGTACATCTTCCTGGAATTCACTAAACACCATGAGTAAACAAGAAGGG # Questionable array : NO Score: 9.17 # Score Detail : 1:0, 2:3, 3:3, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTTCATGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: F [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.70,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [40.0-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0.27 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 7 173199-173359 **** Predicted by CRISPRDetect 2.4 *** >NZ_FNPI01000011.1 Evansella caseinilytica strain SP, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ================================== ================== 173199 32 100.0 33 ................................ TCCGAAATTTGACAGGTTGGAGTACAGCATCGA 173264 32 96.9 34 T............................... GTTTGAGTCCGAAACGAGCGTCAGTCCCTTCAAC 173330 30 93.8 0 .........................--..... | ========== ====== ====== ====== ================================ ================================== ================== 3 32 96.9 35 GTCGCACTCTTCATGAGTGCGTGGATTGAAAT # Left flank : ATCCTGACGTCGATCAATATTTTGCCTCCTGGTTGCTTTGGGCTTATTCAATCATTATCGTGACTGGTTTTATGAAAACAAAAAATTAATTGGATGGAAGTCTCATTGTTTGTGTTTTTCAAAAGACCGTCGTTGCTATCAGACTGTTTTTTAACCGCAATCAATTCTAATGGATAAATTCGTTTTGCTATCTGGCTTGATTGGTGCGTATCACCTTCATGCTTTGACGTGAAGAACCAAGCATGGGGCAGGGAAATCAAAATAAGTAAACGGCATGAGTAAAATTCAGTGTTTGACCATCCCTTGATTGCCTGTTTCCGAAAAGGAACTGTGGTGCGAACCCCAAGCGCACATCAAATCCCTAGGAGGTTCGCACCTGTTGATATTACTAGGTTTCTGAGGAAATGTCTAGCGGAAAATGCCAAATTGTAGTAATCTAAAAACAGGTTCGCACTTTTGCCCTCCGGAACCCTTGAGGGACAAGGCGCCAAACCGGGCGC # Right flank : AATTGTTACTTTAGGCTGTCCAAAACTGAACTGCCCCCTGTCAAGTAGACAGTGGAAATAATAAAAATGATTTAAGCGGCTTTAGCTCTATATTCCATAGGGCCAAGGCCGTTTCATCGTTTTTGGTATCCTTCATAATTATAAAAGTGGATGTACTCATTTATCGCTGTCGAAAGTTCTTCAAATGTCTTATATTTATGTAAATAATACTTCTCGCATTTTAGTATTCCAAAGAAAGATTCCATCGGTCCATTATCAATACAACGACCAACTCGGGACATACTTTGTGTCAATTCTGCAGTATCAAGCTTCCGTTTAAACGCCCGAGAGGTGTATTGGAATCCACGGTCACTATGGATAAGGGGGTGT # Questionable array : NO Score: 8.52 # Score Detail : 1:0, 2:3, 3:3, 4:0.85, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTTCATGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.84%AT] # Reference repeat match prediction: F [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.70,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [36.7-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0.27 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 6170-6992 **** Predicted by CRISPRDetect 2.4 *** >NZ_FNPI01000038.1 Evansella caseinilytica strain SP, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 6170 32 100.0 34 ................................ TTTATTCTCTCGATGTCCTGAAGCATTTGATCGG 6236 32 100.0 35 ................................ CTCCTTTTATTTACTACATAGTATCTCTCGACTGG 6303 32 100.0 34 ................................ TCATTTGTTGTTGTTCTTGTTGTTGCGGTTCCTT 6369 32 100.0 33 ................................ TCGGTTACAGGAGTGGCCTCCTTTACGTTTAAG 6434 32 100.0 34 ................................ ATTGATACCCATGATGGTCGTAGATTGTACGATA 6500 32 100.0 34 ................................ CTCTTGTCGTATATGTCCAAGGGCGGCCATATCG 6566 32 100.0 33 ................................ TATCACGTTAAGGACTGCAATCAGTTTATCCTT 6631 32 100.0 36 ................................ CTCCTTTTTGCGGAACCAGTCATCAACCGTAACGCC 6699 32 100.0 34 ................................ GATATACACATGTTGGCTCGCGAAGGAATCGCCT 6765 32 100.0 34 ................................ GTCAAGAATCGCGGGTACGTGTGGATGGATCGCG 6831 32 100.0 34 ................................ ACGGGTGTAGAAAAGGTAATCAGCGCAACAGATG 6897 32 100.0 34 ................................ GTTTGAGTCCGAAACGAGCGTCAGTCCCTTCAAC 6963 30 93.8 0 .........................--..... | ========== ====== ====== ====== ================================ ==================================== ================== 13 32 99.5 34 GTCGCACTCTTCATGAGTGCGTGGATTGAAAT # Left flank : TTGGGGTGGAAATTTGTATATGGAGTGAGTGATAATCACCGAAGATTCGATGATGCTATTGGGTGGTTTTACACGGAGTTAGAGGATTTTTTAGTTTTGAGGGGACCGGTAAAGTATTCCGTTATTGCGGATGTCTTGGTAATTACCAAAGACGGTAAAAAATATGAGGCAGAGATTGTCAGGTCTGAAAATCAGAAGGGGCAATGGTTTCTTATTGCGGAAGATGAGGATTTCAACGAGGCGACCCTAGTCGCTCGGGATGAGGATGGACAAATAATAGAAGAGCATGTGATTGTCGCCGATTGAGAATATTTTGTAAGGAGATGACCGTGGTGCGAACCCCAAGCGCACATCAAATCCCTGGGAGGTTCGCACCTGTTGATATGACTGGGTTTCTGGAGAAATGTATAGCGAAAAATTCCAAATTGTAGTAATCTAAAAACAGGTTCGCACTTTTGCCCTCCGGAACCCTTGAGGGACAAGGCGCCAAACCGGGCGCG # Right flank : AATTGTTACTTTAGGCTGTCCAAAACTGAACTGCCCCCTGTCAAGTAGACAGTGGAAATAATAAAAATGATTTAAGCGGCTTTAGCTCTATATTCCATAGGGCTAAGGCCGTTTCATCGTTTTTGGTATCCTTCATAATTATAAAAGTGGATGTACTCATTTATCGCTGTCGAAAGTTCTTCAAATGTCTTATATTTATGTAAATAATACTTCTCGCATTTTAGTGTTCCAAAGAAAGATTCCATCGGTCCATTATCAATACAACGACCAACTCGGGACATACTTTGTGTCAATTCTGCAGTATCAAGCTTCCGTTTAAACGCCCGAGAGGTGTATTGGAATCCACGGTCACTATGGATAAGGGGGTGT # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTTCATGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: F [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.70,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [36.7-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0.27 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //