Array 1 406707-404057 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFIQI010000002.1 Klebsiella pneumoniae strain KP51483 51483_chromosome2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 406706 29 100.0 32 ............................. GAGCAGGCACCCGCCGCAACGACGAAGAGCGC 406645 29 100.0 32 ............................. AAATCAGCCAGCACCACGATTCTGGGAAATTT 406584 29 100.0 32 ............................. ACAGGCTTACCCGTATTGAGACGGTTGCTGAA 406523 29 100.0 33 ............................. GAAACCCCATCAGATGACCCTCCCCATGTTGGC 406461 29 100.0 32 ............................. TTGCCTGGTCTGCTTGGTGATGATCCGTGGTA 406400 29 100.0 32 ............................. TACAGAACGACTGAGGCGGCGTGTATTGCATA 406339 29 100.0 32 ............................. GATCTTAACTCTATTGCCAATGGCGCAATTCA 406278 29 96.6 32 ..........................A.. GGCGATGCGCGCTCTGCTGGCTATCGGTAAAA 406217 29 100.0 32 ............................. AATGCAGCAACCGGCAAATATATCGCCGGTAA 406156 29 100.0 32 ............................. GGGCTGCCGCACGCCTGGGACGAGTCGAGCCC 406095 29 100.0 32 ............................. CCGCAATAACAAAAATAAATGAGGGTTAAAGT 406034 29 100.0 32 ............................. GTAAATGGGAATGAGTAGAAGAGCGTCATTGG 405973 29 100.0 32 ............................. CCCCCGCGCACATGCTTAAACGCGCTATCACG 405912 29 100.0 32 ............................. GGCATCTGTTGTGTAATGTTGAGTTTTTTTCA 405851 29 100.0 32 ............................. CAGGTTAAACATGTAAAAAATGACCGTCGCCG 405790 29 100.0 32 ............................. CACATTGCCCGGTCTGAAAAGTATTTGAAAAT 405729 29 100.0 32 ............................. TCCGCACAGTCAAACGCTCCAGACACCAACCC 405668 29 100.0 32 ............................. CCGGAACACCACCAGTAACAGCTACTGTAGGC 405607 29 100.0 32 ............................. TGACCCTGTTGATTTTGTTCCAGGTAATACGT 405546 29 100.0 32 ............................. TTAACCTCGTCGTTCTGGTTTCCGCCCAGGAT 405485 29 100.0 32 ............................. GAACCTGAATTCGAAGGGTGGGTCATCCTTCC 405424 29 100.0 32 ............................. GGACCCCGAGCGACCCGGTCACCCTCCGACCT 405363 29 100.0 32 ............................. CCGTCGAACGGCGGTTATATCCATCTTGAGTC 405302 29 100.0 32 ............................. ACCGATCCCACAATTGCGGCGGTTGAGATTGA 405241 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 405180 29 100.0 32 ............................. CCGATTGTCTGGCGGTCGAGCGCCATTTGCTC 405119 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 405058 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 404997 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 404936 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 404875 29 100.0 32 ............................. CCCTCCGCTTTCAGGGTGTGGCTGATATCACC 404814 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 404753 29 96.6 32 .............A............... TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 404692 29 100.0 32 ............................. ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 404631 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 404570 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 404509 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 404448 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 404387 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 404326 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 404265 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 404204 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 404143 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 404085 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 44 29 99.3 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCCTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : GTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //