Array 1 2273-6628 **** Predicted by CRISPRDetect 2.4 *** >NZ_VIDT01000233.1 Ideonella azotifigens strain DSM 21438 233, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 2273 28 100.0 33 ............................ AGACCGGCCCACCACCGGCACGGACTCAATCAT 2334 28 100.0 32 ............................ ACGTCAGGCATGCGCAACTGATGCGTCTCATT 2394 28 100.0 32 ............................ ACACCCCAGGGGGGAGCAGCAGGCGAAGATGA 2454 28 100.0 32 ............................ TAAAGAAGGCGGGCGACACGTCCTCATCAGAG 2514 28 100.0 32 ............................ GAGTGGATGCGATGCGTGCCATTGAGGCAGCG 2574 28 100.0 32 ............................ TTGCTCAGTCAAACGTTGTCGAATCGATTACT 2634 28 100.0 32 ............................ ACCCCGGCGCCACTACTTTGTCACCCTGGCCG 2694 28 100.0 32 ............................ AAAACGCCGGCCGTCGAATACCACTTGGTCGG 2754 28 100.0 33 ............................ CTGCAGCGCATCTCCGATCCGCACGCTATTCCT 2815 28 100.0 32 ............................ ACGACGGTTGGAAGCAACGTCATCACGGCGGT 2875 28 100.0 32 ............................ TGTGCGGGCACATACACGCGCCACTGGGCGGC 2935 28 100.0 32 ............................ AAATAAGCCGCGCGAGCGAATCCGCGTACAAC 2995 28 100.0 32 ............................ ATGAAGAGCACGCGCTGCGCGCCGCTGACCAA 3055 28 100.0 33 ............................ TTCAGCTCGACCTTGCGGCGCTCGACCATCTTC 3116 28 100.0 32 ............................ AGGTGGTGAACGCCGAGATTGCGCCGATGCGC 3176 28 100.0 32 ............................ ACTACGAGCGCCACCGCGAGCAAATTATTGCC 3236 28 100.0 32 ............................ ACCGACCCCGCCGGCGAACTGCCTGCACAGGC 3296 28 100.0 32 ............................ AGTTTCGACGCGCAGTGATGCGTGAGGCCGTG 3356 28 100.0 32 ............................ TGACAGATTACAAGATCTTCGCACCACCGAGT 3416 28 100.0 32 ............................ TCACGTCAACAAAGGAACTCTCCGTGAAACTC 3476 28 100.0 32 ............................ ATAACGCAAGCCCAGGATGTCCTGTGTGATTA 3536 28 100.0 32 ............................ TGCCGAACTTCAGCGGCGGCGCCAACGACGCA 3596 28 100.0 32 ............................ TGGCCAGGAAGGCAATTTCCTGCGGGCCGACC 3656 28 100.0 32 ............................ GCCTTCCTTGGCTTCAGCGTGTCCGCCTTCGC 3716 28 100.0 32 ............................ AATCTACCCCTTGCGTCACTTGAAGAGTCCAG 3776 28 100.0 32 ............................ TCGTGCTGGTCCATGCCTAGTCAACCGTTGCC 3836 28 100.0 32 ............................ ATGACCAGCGACCAACAAGAGCAACAGACCAT 3896 28 100.0 32 ............................ TCACCCCCGCCCAAGCCGAAGCCGTCTATAGC 3956 28 100.0 32 ............................ AAACGGACAAGCGCAATGAGCACGCACGATTG 4016 28 100.0 32 ............................ AGATGGCAACGGCACATCCCACGACCCACCTC 4076 28 100.0 32 ............................ TCACTCAATCCCAGGCCGAAGCGGTCTACAGC 4136 28 100.0 32 ............................ AGACCGGCCCACCACCGGCACGGATTCGATCA 4196 28 100.0 32 ............................ ATGTGCGCCGTGATTGATTGGATGGTCATGTG 4256 28 100.0 32 ............................ ACGATGACGGCGGGATCGGACACCGTGTCGTT 4316 28 100.0 32 ............................ AACGAGCCAGGCGGGTACGCGGGCGAAGACAT 4376 28 100.0 32 ............................ AGAAGACAACGTGCACGAACTCTGGCACGCGG 4436 28 100.0 32 ............................ GTTATGTGGATGACAGACGCAGAAGTAGCTGA 4496 28 100.0 32 ............................ GCGCACCAAACTCAGCAGCGCCCAGAGGAACA 4556 28 100.0 32 ............................ TGCACGCTGGACAGGATGTGGCCGATCTGCTG 4616 28 100.0 32 ............................ AACACCTCATCAGCCCGACGCGCTTCATACGG 4676 28 100.0 32 ............................ TGAGCGTTTCGACGGGGACACCTTGCGCCGCG 4736 28 100.0 34 ............................ TATCTTCGTTCGGTTGGTATCGGACTGTGATTTC 4798 28 100.0 32 ............................ TGGGGGAAGAAGCCATGACCACCTTGCCCAAC 4858 28 100.0 32 ............................ ATCAAAGCGGCTGGCGGCGTAGCGGCGCTCGC 4918 28 100.0 32 ............................ ATCGAAGAAGAGATCGCGAATGCGCACCTGAT 4978 28 100.0 32 ............................ AGACCGAGCGCCTAAAGGCGCGGCTGATCGCG 5038 28 100.0 32 ............................ TCGGCACGCTGCCCAGTGACGACGCCGCCCAG 5098 28 100.0 32 ............................ CGGTCGAAACCGCCGAGGTGACAGCCTTCAGT 5158 28 100.0 32 ............................ ATGCAGAGATGGAAGGCAAGTATGTGCGCTGG 5218 28 100.0 32 ............................ AGACCAGCCGCTGGGCGCCCAAGGAATTCGCT 5278 28 100.0 32 ............................ ATTGGCGGCGCGAAGGACTTTCTCTTGTCCGC 5338 28 100.0 32 ............................ ATGCAGGAGCACCATGATGAACCGGATTGTTC 5398 28 100.0 32 ............................ ACTGCACGCCCATTTCCCGCGCTATGGCGTCC 5458 28 100.0 32 ............................ TATCCTGACCGGCAAGCTGAAGGCCAAGATGA 5518 28 100.0 32 ............................ TGCGCCGCTGGTGGCTGATCCCGCGCAACCGC 5578 28 100.0 32 ............................ ACACCGCGCTGCTGCGGCAGGCGTTGGAGACC 5638 28 100.0 32 ............................ ACCAATGCCGGCGGCGGCGCCTCGTGGCGCTC 5698 28 100.0 32 ............................ ATTCACTGTCCGCGTAGGTGATCTTGGCGTAG 5758 28 100.0 32 ............................ CCTGGCGCTGCTACGGGTGCGGCAGCGAGGGC 5818 28 100.0 32 ............................ TGCTGCTGGCCATAAAGCAGCTTGATGTCGCG 5878 28 100.0 32 ............................ GCCATGACGACGCTGCGCGAACAGATCACGGC 5938 28 100.0 32 ............................ TTCCTGGAAGACAACCGCCAGGACGTGGCCAG 5998 28 100.0 32 ............................ TGGTGATCCCACAGATCAGCGGCGCCTGCCCC 6058 28 100.0 32 ............................ CTACAGAGGGCAGGCCAGGCCGCGTGGTGCGA 6118 28 100.0 32 ............................ AGATGGCGTAGGAGGCCACATGCAAGCAGTGA 6178 28 96.4 32 .............C.............. ATCACGGTTGCCCAGCTCGTCGCGTGCGGCAT 6238 28 96.4 34 ..................T......... ACTGCTGGCCCGCGGCGACGTGAACCGGCCGTAA 6300 28 100.0 32 ............................ ATCGAGTTCATTCTCGACGTGGCCCAGTGGAC 6360 28 100.0 32 ............................ TGGAGCTGGCCGGCGTGCCGATCTGGTGGCCC 6420 28 100.0 32 ............................ TCATGTGGGGGCGCAACTTCCGCTTCGTCAAC 6480 28 96.4 32 .............C.............. GAAGTACTGGACCCAGGCGAGGTGGGCCGAGT 6540 28 92.9 33 .............C.......C...... TTCGACCTCCCCAGCGAGGGAACAAGCATCCGC 6601 28 92.9 0 .............C............C. | ========== ====== ====== ====== ============================ ================================== ================== 73 28 99.7 32 GTTCACTGCCGCGTAGGCAGCTCAGAAA # Left flank : CCGAACTAACGCGGCTGATGGAACACGACTGGCTGCAGGGCATGCACGACCATGCAGACGTGCGGACCCTGGTCGCCGTGCCCCCTGAGGCAACCCAGCGCACCCTGCGCCGCGTGCAGGCCAAGAGCAGCCCCGAGCGCCTGCGGCGGCGCCAGATGCGCCGTCACCAGCTCACGGCAGAGCAGGCACTTGAACGGGTGCCTGACAGCGCCGCGGAAACATTGAAGCTGCCCTTTCTGACGCTGACCAGCACCAGCACCGGGCAACGGTTCAAGCTCTTTCTGCGGCTGGGCCCATCCACCGGCGCTGAGCAGGCCGGGGACTTCAACAGCTACGGCCTGAGCAGCACCGCCACCGTCCCCTGGTTCTGACCCTTTTTCTGGCGACCAACGCAAGTGCTTGATCTTCAAGCGCTTGCGTCGCAACTCGGCAGAATGGGTCGCTAGCCCGTTTCGGCCAAAATGCACGTTGCGACAAGCACTTACGCCCGACCGCGCGTA # Right flank : ATTTTTGAAATTTCGTCGCGGAATGGTCCGCCGGCATACATCTCATAGCGCACGCTCCAAGCGCAATGCAAGCGATGATGTTCGCCCGTGGACACGCAGCGCAACACACCATGAGCACCTCCATGACCGGTGGCACCGCCCTGTTCGACACACCCGTCGGCGCCTGTGGCCTGGGCTGGGGCGATGACGGGCGGCTGCGGGGCTGCTGCCTGCCCGAAGCCGACCCGGCGCACACGGCACGCCGCCTGCGCCACCAGTTTCCGGAGCTGCCGTGGCACGACACGCTGCCGCCGGCCATGGCGGTGGTCGCCCGGCGCTGGCTGGCAGTGCTGACCGAAGGCAGCCGGGACACGCTGGCGGATGTGGCCTTGAACTTCGACGGGCATGCGCCGTTCCATGTCCAGGTGTGGCAGCTCGCCAGGCAGATTCCGCCGGGGCAGACGCGCAGCTACGGCGAGATGGCCAGGTTGCTGGATCAGCCGCCGGCCATGGCGCGTGCG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCGTAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCGTAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [38.3-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0.27 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //