Array 1 298488-299855 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACSZO010000002.1 Klebsiella pneumoniae strain hkcpe49 2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 298488 29 100.0 32 ............................. CTTGAGCAAGGCGCTTTTTCTCCTGGGTGACA 298549 29 100.0 32 ............................. CAGCGCCTGGGAGGGATTCCGGATCCAGGTTA 298610 29 100.0 32 ............................. TTCGGAAAGTTCTTTTTCAGCTGATCCGTAAC 298671 29 100.0 32 ............................. GCGTGGACACGGATGTAGTGCTGGAGAAGGCG 298732 29 100.0 32 ............................. TTTACGGAATTGCTTAGGTCGCGAGAATGTCG 298793 29 100.0 32 ............................. TAGTCATTTGCCGGTGACGGGAACCCCATAGC 298854 29 96.6 32 ................T............ ATTAAATAATTCGTTTACGTCCATGACGAGAT 298915 29 100.0 32 ............................. GTAATCCTGATATTGGCGTATCAATGGTCACG 298976 29 100.0 32 ............................. TGCGGGCCACCAGGGTTGCAGGGTATCAATGG 299037 29 100.0 32 ............................. GCCCAGATCGGCTTTTCATCCCGAAGCCGGGC 299098 29 100.0 32 ............................. ACCGCTCCTCTGACGCCAGGAGGGTGTAGGAG 299159 29 100.0 32 ............................. TCCAGGGGCAAAGAATTGCCCATTATCGTACA 299220 29 100.0 32 ............................. TTTGCAATATCTGCCTGCGCCGCCGCCAACGT 299281 29 100.0 32 ............................. CTCGGATAAAATGCCTTGCATGAGGCGAACGA 299342 29 100.0 32 ............................. GCGTCCAGTTGAACCCGGCACATTCCCGCTGG 299403 29 96.6 32 .A........................... TACGCAGCCGGATCCAGGAGCGCATGGACGCT 299464 29 100.0 32 ............................. GCACGATATTCAGCATCATCAGGACGGTTCAT 299525 29 100.0 32 ............................. ACCTACCAGATCCACACCGGGCGCTGCGAAGA 299586 29 100.0 32 ............................. TCACGCCCAGGGCTTCCTTTGCGTTCCGAAAA 299647 29 96.6 32 ........T.................... CCCCGTCGTCATTCGCGCATTCTGCGCACAGA 299708 29 96.6 32 .....A....................... TGCGTCACGACGCCGGCGACAGTGACATCGTC 299769 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 299827 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 23 29 98.4 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACTGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : CGTCCACTAACGTTATCGATCCTGAGGGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTGGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCTGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATATAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.18 # Score Detail : 1:0, 2:3, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //