Array 1 40369-40703 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV803401.1 Fusobacterium sp. HMSC064B12 Scaffold52, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ========================================== ================== 40369 35 100.0 41 ................................... TACTTATATCTAAATAAACTATATCAGTTTCAGTATCCAAC 40445 35 100.0 41 ................................... TTATATTTGACTTTAACTTACGAAAGCATTATAACATACAT 40521 35 100.0 42 ................................... CATGAATTTACCTACTATTCAAATAAAAACTTATAATCTTTA 40598 35 97.1 36 ......................T............ TCCTCTTAATCTTTTTATTTTCTTAAACATCCATAT 40669 35 71.4 0 ...A.......T..G..A.TA.A..TG...A.... | ========== ====== ====== ====== =================================== ========================================== ================== 5 35 93.7 40 ATACGAGAAAAGATAACTCCGAGAGGAGACGGAAA # Left flank : GAAACATCTAGTAAAGTTTCTAAGGGTAAGTTAAGTAGGTATTCATTGGAGCAATTAAAAGAACTTTTTGATGAAAATAGTTCTTTGAATAAAATATATAGTTATACAAAAGAGTGTACTATTTGTAAAAAGGCTGAAGATGAGAGTATATTAAAGAAAAATGCCTTAGATTTTGATGAAGAAGAAGGGATAGAATTATGCAGTTCTTGTAGAGGATATATTGATCTAGGAAAAGAGGTTTCTAGCTTATATTATTCTAATAATGATAAATTTATAATAGAGAAAGAGTGTGAAAATTTTATCAGTGCCTTATCATTTTCTATTTCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAGAAAAGATAACTCCGAGAGGAGACGGAAATCTTAACTTCTCTTTTATCTGAATATTTTGGAGCGGCATTTA # Right flank : ACTCATTCTATTGACAAAAAATCAATATATTTTTATAATACTAATATAAGAAAATAGGATTCTGAAGAAAGATAGAAAATGCTAAAAATATAATAATATTTCAATATTCAATTAAGAATTTCTCACAATTGAAATTTTTATAGAAAAAAATAAAAACTATTTAAGGAGGAATTTTATGAAAAAAACACTATTTTCTATATTGCTTATAGGAATTTGTATGACTGGAGTAGCAAATGCAAAAGAAAAAAATCCAATTCTTTTAAAACAAGTATATAAAAAGGAAGAATTGATAACATTGGACAAACAAAATGTAGCAGGAGGAAATGGAACTTTACATGGAAAATTTGCCTTTACAAGAGATATGGCTACTGAAGATGAAGCTATCAAAGAAATAGGTTGGATGACACTAAATAAAGGGGAATCTGTTGGAGTACACCCTCATAAAAATAATGAAGATACTTACATTATTGTTTCAGGAGAAGGAGTTTTTATAGATGGCT # Questionable array : NO Score: 2.75 # Score Detail : 1:0, 2:0, 3:0, 4:0.69, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATACGAGAAAAGATAACTCCGAGAGGAGACGGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.60,-4.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-83.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.27 Confidence: MEDIUM] # Array family : NA // Array 1 1094629-1094071 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV803421.1 Fusobacterium sp. HMSC064B12 Scaffold168, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ====================================================================================== ================== 1094628 36 100.0 30 .................................... TAAAAGAATATATTTTACCTGGTGAGGCTG 1094562 36 100.0 31 .................................... TTAATTTCTATGCTATAATAGGTTATCTTAA 1094495 36 100.0 31 .................................... CTTATAAATTATACTACTTTTAAAATTTATG 1094428 36 80.6 86 .............................NNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 1094306 36 80.6 30 NNNNNNN............................. TAACAATGGGATTATAAATGGTAGGAACTC 1094240 36 100.0 30 .................................... ACTTAAATCAAAAAATAAACGGTCCTGGTG 1094174 36 100.0 30 .................................... GAAATTGAATTTGAAAGTATTAAGAATTCT 1094108 36 83.3 0 ..................C.......C.G..T..CT | AA [1094081] ========== ====== ====== ====== ==================================== ====================================================================================== ================== 8 36 93.1 38 GTTTGAGAGTAATGTTATTTTAAATAGATTCAAAAC # Left flank : TAATGTTATTTTAAATAGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAATGTTATTTTAAATAGATTCAAAACTTAATGGCAATAATATTAGGTGCTGAAATGGTTTGAGAGTAATGTTATTTTAAATAGATTCAAAACATACTAACACAGGTATTTTACAATTAAAAGAGTTTGAGAGTAATGTTATTTTAAATAGATTCAAAACTACCTACTTTAGAAGTTCAGAACAAAACTGGTTTGAGAGTAATGTTATTTTAAATAGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGAGTAATGTTATTTTAAATAGATTCAAAACTCGGAAAATAAAGAGGTTACTATGAGTAAA # Right flank : TTTTTCTATTTTAAAATAACAAAAAAGGGGCATTTGAAAAATAGCTATTTAAAGTAGATTAAAATAATAGTGAAAGAAAAACTCACAAGCTTCTTGTTCAGTTTGAAAATAATGTTCATCTGTAAAAGCATGACTATCAGCATAACAAACTATCCAATTATCCTCTCCTTGAATCAAACACACATCATTAAAATGTAACTCTGTTGTTATATAATAAGTTTTAAAATAATATTCTTTTGGTTTTTGAGCTTCAGCTTCTAAAACTTTTAAAAGTTCAGGAACAGTTTTTATTGGAAGATATGATAATAACTTTTGTGTTCTAAGTTCATTCTTTTTTTCTGTATGTAAAGTTGCAAAATATACCCATATTTTTAAAACAATAACAACAGGTAAAACACAACAAAAAAGAACCATAAGTAAAATTTTAAATAATATCATATATTTTTTACTCCTTTAAAATATATTAGTAATCTTCTAAATGTTCTAATTCAAATTCAAGG # Questionable array : NO Score: 5.28 # Score Detail : 1:0, 2:3, 3:0, 4:0.65, 5:0, 6:0.25, 7:-0.62, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGAGAGTAATGTTATTTTAAATAGATTCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:77.78%AT] # Reference repeat match prediction: R [matched GTTTGAGAGTAATGTTATTTTAAATAGATTCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], // Array 2 1095722-1094849 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV803421.1 Fusobacterium sp. HMSC064B12 Scaffold168, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ====================================================================================== ================== 1095721 36 100.0 30 .................................... TTGACATTTTATCTAAAAAGAGTATAATGA 1095655 36 100.0 30 .................................... TTGATTAATTTAAAAAACATTGAAGGAGCA 1095589 36 100.0 30 .................................... TATCAGTTTGTATATAATCGTTATATGCTT 1095523 36 86.1 86 ...............................NNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 1095401 36 75.0 30 NNNNNNNNN........................... TTGATATAGTACCACTTGAAGAAATACCAA 1095335 36 100.0 30 .................................... AGCTATCAGATACCTTTTAAAAGCATTCTA 1095269 36 100.0 30 .................................... AGGTAAATTATAGATTAGAATAGAATTTTA 1095203 36 100.0 30 .................................... AGGAGGAGATTATGGGAGTCGTACTTGTAA 1095137 36 80.6 84 .............................NNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 1095017 36 75.0 30 NNNNNNNNN........................... TTAATGGCAATAATATTAGGTGCTGAAATG 1094951 36 100.0 31 .................................... ATACTAACACAGGTATTTTACAATTAAAAGA 1094884 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ====================================================================================== ================== 12 36 93.1 40 GTTTGAGAGTAATGTTATTTTAAATAGATTCAAAAC # Left flank : TATTATAAGGAATTAAAAAATTTAAGTGAAAATGAGTTTTTAAATGAAACTTTAGAAATTAAAGAAATTTTAAAAGATTATATTAATAAATTAATAGAAAATAACTATTCATTAAAGTTTGAAGATGATTTAGATGTTAGCCAAATTTTAAAAGCATTTAGTATAAAATTTGAAAGAAGTGAGGACTTATTATTAAATTTATTTGAATGGCTAAAAATATTAAATGAAATCTTAGGATATGAGATATTTTTCTTTATAAATATAGAAAATTTTTTATCAGAAGATGAATTACTAGAATTTTCTAAATTTATAGTGTATAATAAATATAAAGTTGTTTTTTTAGAAAATTTTTATAGAAATAAGTTATCTGATAATGATAATTTAATTGTTATAGATAATGATTTATGTGAAATTTTCTAATCTATTTAGAAGCATTGAATGATTCGTAACCATTTTGATTAATTTCAGCTTTCAGTATAGACCTAAATATATGAATTGTG # Right flank : TACCTACTTTAGAAGTTCAGAACAAAACTGGTTTGAGAGTAATGTTATTTTAAATAGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGAGTAATGTTATTTTAAATAGATTCAAAACTCGGAAAATAAAGAGGTTACTATGAGTAAAGTTTGAGAGTAATGTTATTTTAAATAGATTCAAAACTAAAAGAATATATTTTACCTGGTGAGGCTGGTTTGAGAGTAATGTTATTTTAAATAGATTCAAAACTTAATTTCTATGCTATAATAGGTTATCTTAAGTTTGAGAGTAATGTTATTTTAAATAGATTCAAAACCTTATAAATTATACTACTTTTAAAATTTATGGTTTGAGAGTAATGTTATTTTAAATAGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 5.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.65, 5:0, 6:0.25, 7:-0.73, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGAGAGTAATGTTATTTTAAATAGATTCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:77.78%AT] # Reference repeat match prediction: R [matched GTTTGAGAGTAATGTTATTTTAAATAGATTCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [16-14] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //