Array 1 2343590-2341115 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP034752.1 Jinshanibacter zhutongyuii strain CF-458 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 2343589 29 96.6 32 ............................A ATCATCCCGGTTTCCTGCGACAACACAAATCC 2343528 29 100.0 32 ............................. CATCTGGCGGCGCGTAATGCCGAGATTGAGGC 2343467 29 100.0 32 ............................. GGTTGATTACATGATCACCAGTCAGGACGGTG 2343406 29 100.0 32 ............................. CGTTCCTTGTTGAAGCTGCGTGAATTGCCTTC 2343345 29 100.0 32 ............................. CACGCTAATTTCATCACTATTGAGTTCAATAA 2343284 29 100.0 32 ............................. GGGATTGGTGATGGGGAATGGGGAATGGGGAA 2343223 29 100.0 32 ............................. CCATGAATGCGCTCGAAAATGTGAATCAGAAC 2343162 29 100.0 32 ............................. GTAGGTATCCTCTTGCAGGCTGTTCATCTTTT 2343101 29 100.0 33 ............................. TGATACGGGGTTGATCATGCTTACCATAAAGCC 2343039 29 100.0 33 ............................. CCAGTGCTTCAGCTTAGATAAAACAGCACTGTC 2342977 29 100.0 32 ............................. GTGAGCAGTCCGTCTGAGTCATTTCGGAATCG 2342916 29 100.0 32 ............................. AAACATTCTCGAATGTGATTGATTTCATTACT 2342855 29 100.0 32 ............................. CTACTAAAATGGCTCGAATGTCACGACAAACA 2342794 29 100.0 32 ............................. CTTATTGAGATTGCAAAATGCCTTTATGTCCG 2342733 29 100.0 32 ............................. GCATTACTGGGTTGGGAGCCTGAAAAATGTTA 2342672 29 100.0 32 ............................. ATCTACTACATCATATAGGCTGAAGTCTATTC 2342611 29 100.0 32 ............................. TTTATCGGGTAATGCTTTTTGAGACATCTTCC 2342550 29 100.0 32 ............................. CGGATGATAGCGGCGTTTCCGGGTGGCAAGTC 2342489 29 100.0 32 ............................. GAGCGCAATCTGATTGCGATTTGTGAGGGTGA 2342428 29 100.0 32 ............................. CGCATGGTCAGGCAGGGGATATGTACTTCACA 2342367 29 100.0 32 ............................. GCGTTAATAGCATTCTCACTTTTTACGCCCCT 2342306 29 100.0 32 ............................. ATTAACTATCTTGGGAATACCGGACCGGCCAG 2342245 29 100.0 32 ............................. CTGAATCGCTGTCTGACCCTGGGTTAATGCAA 2342184 29 100.0 32 ............................. GTGAAACAGCAACACTCCGTAATCAATACAAC 2342123 29 100.0 32 ............................. TTTATGAACGACAGGCAGATGGCTCACGAAAA 2342062 29 100.0 32 ............................. TGAGAGGAATATTGAATGAGGCAATAGATAAA 2342001 29 100.0 33 ............................. TTTATCGGGTAATGCTTTTTGGGACGCCTTCCA 2341939 29 100.0 33 ............................. GATCATCATCCGGTTCAACGGATGTTGACTGGA 2341877 29 100.0 32 ............................. GGGTATAAAAAAGAAATAAGTACATATGGTAA 2341816 29 100.0 32 ............................. ATATGTGATGCGTTCAGACACATCATCAACTG 2341755 29 100.0 32 ............................. GGGGTTATCTGATGGGTAATTTTTGGTTTCCG 2341694 29 100.0 33 ............................. CCCAGATTTAGGAATATAAAAATCCTTCCTGAC 2341632 29 100.0 32 ............................. TGGAAAGGAGTGGTGATAAATGACCATTGATG 2341571 29 100.0 32 ............................. AACTCACTCAGGGCGAGCAGGTTGGTGAATCT 2341510 29 100.0 32 ............................. GTGATGTTGAGCATGAGGGTGACAGCAAACAA 2341449 29 100.0 32 ............................. ATGGATGTATGTTCCTGATTATGGGATTTACT 2341388 29 100.0 32 ............................. CATCTCGCGGACTCCTTTGACCGACAAATCAG 2341327 29 100.0 32 ............................. GAATAATTCATGACTCAATTAGACGCATCAGC 2341266 29 100.0 32 ............................. CTTTCAGGGTTACCATAACCATAACCTGATAT 2341205 29 100.0 33 ............................. GCTTTAAATGTTCGCCCGGAATGGTTGTCTAGC 2341143 29 93.1 0 .............C.............T. | ========== ====== ====== ====== ============================= ================================= ================== 41 29 99.7 32 ATGTTCTCCGCGCTAGCGGAGATAAACCG # Left flank : TTGATTGAAGAAGTTTTGTCTGCTGGTGAAATTCCATTGCCTGAGCCTTTTGTTGATGCCCAACCTCCCGCAATACCTGAACCAGAATCATTAAGTGATGTGGGATATAGGAGTAAGGGGTAATGTCAATGTTAGTGGTAGTGACTGAAGCGATACCTCAACGTTTAAGAGGGCGGCTTGCTGTTTGGTTACTTGAGGTTAGAGCCGGTGTTTATATTGGAGACACTTCACGCAAAGTAAGGGAAATGATTTGGCAACAAATAATACACCTTGCTGATGAAGGTAATGTAGTTATGGGGTGGGCGACAAATACAGAGTCAGGATTTGATTTTCAAACATGGGGTGAGAATCGTCGTATTCCGGTAGATCTGGATGGGTTAAGGTTGGTCTCATTTTTACCTATTGAAAATCAATGAGTTATTGTTCTTTAAAAATATGAAAAAGTTGGTGGATATTTTAGAGTGATAAATGTCATTATAAAACAGTTAGATAAATTTAGT # Right flank : TCACCATACCGATATTAACTCCGATTTATTTAATGTTCTTAACACGACTAGAGATTAATATAGCTATTGGCTCATTACCGATTACATCAACTCACATAAGATAATATTTGTTATATGCTTGTTTGCGCGTATCTGATTGTTGTAGGCTGTAATATTGTTGTTTGATTAGACACCGGATGGGTAAAAATGAACTACCAAAATGATGATATAAGAATAAAAGAGATTAATGAGCTATTACCTCCGGTTGCGTTACTGGAGAAGTTCCCTGCTACGGAAAAGGCTGCTTTAACTGTCGCTGCTTCCCGTGAGGCGATTCATAATATTCTGGCTGGTGAAGACGATCGTCTGCTGGTGGTAATTGGACCTTGCTCTATTCATGATATTGACGCTGCGCTTGAGTATTCTCGTCGTCTGGCAGAAGTACGTAAACGTCTTGATAAAGATCTAGAAATCGTTATGCGGGTTTATTTTGAAAAACCGCGTACAACGGTGGGCTGGAA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATGTTCTCCGCGCTAGCGGAGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCTAGCGGGGATAAACCG with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-9.90,-11.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //