Array 1 32700-30275 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABWCV010000009.1 Halomonas maris strain QX-1 NODE_9_length_183571_cov_60.452020, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 32699 28 100.0 32 ............................ ACATAAGTTCCGCGCTTACGTGGCTGGTTTCG 32639 28 100.0 32 ............................ TGACCGTCGCAAGCGCGACATCGACAACTATG 32579 28 100.0 32 ............................ ATTGGCGGCGCGGCCAAAGCGGCCCTTGTAAA 32519 28 100.0 32 ............................ TGCAGTATGACGGAATCGATATTTCAGGCTGC 32459 28 100.0 32 ............................ CTGGAAGCCCGCGACCGGCTGCGCCGCTTGGC 32399 28 100.0 32 ............................ TAACCTCTGCGACCAAAACGCGACCACAATGA 32339 28 100.0 32 ............................ GATTCAAGCTGTAGACCGTGGCAATTTTAAAT 32279 28 100.0 32 ............................ AGCCGATGGCCGCGCCGCAGCGTGAAACCGCC 32219 28 100.0 32 ............................ AATAGCCGCAGCGGCGCGCAGATTTCAGCAGC 32159 28 100.0 32 ............................ TGTTCGGCGCAAAGCGTGTGCATGGCTTCATG 32099 28 100.0 32 ............................ ACCTTCCAACAGGAGCAGCAGGAAGGCGAGAT 32039 28 100.0 32 ............................ ACCAAATCAGCTCACCGCGTATGTCGGTGGTT 31979 28 100.0 32 ............................ AGCTCACCATCGAAGCGCCGCGCATCGATAAC 31919 28 100.0 32 ............................ TACCACGGGTTGTCCGAACTGCAACGTGCGGT 31859 28 100.0 32 ............................ GTCATTGCTGCGGTGAAAGCGGTATGAGTAGC 31799 28 100.0 32 ............................ ACACTCCTTCAACCCGCCACCAGTGCCAGCTT 31739 28 100.0 32 ............................ TATTAAGCGTGACCATGACTACTAACAGTCAA 31679 28 100.0 32 ............................ TTAATGGCACTGACAGCACAGCAGCGAGCGAA 31619 28 100.0 32 ............................ AAGACGTGCCCGACGCCATTGATGACCGCGAA 31559 28 100.0 32 ............................ AGCCTCTAGAGCCGCGTCCGCTCGCTTAATGA 31499 28 100.0 32 ............................ CCACCAGTTCCAGCCAGCACGGACCGCGTCAA 31439 28 100.0 32 ............................ TACCTGCAAACCATCCGCCAGGAGCTAGACAG 31379 28 100.0 32 ............................ TTTGACGGCACGGTGACCAGCTCGGTCGATTC 31319 28 100.0 32 ............................ AGAAACGAAAAGCCCGGCGCTGCTGGGGAGCA 31259 28 100.0 32 ............................ CGATACCGACGACCTGACTGAAGCGCTGGCCA 31199 28 100.0 32 ............................ AGTTCAGCAGGTCGCGTCCTGTACGTCCCTGA 31139 28 100.0 32 ............................ CGTTATAAGCACGGATAGAAACAGCGGTTGAA 31079 28 100.0 32 ............................ TCCTGATTAGTTCAGGATGCTAAAAAGGGGCC 31019 28 100.0 32 ............................ TCCCATAGAATAAGAACCCCCACCATCAATAC 30959 28 100.0 32 ............................ ATGAAGAAGGCGACTGGAACACGAAGCGCTCA 30899 28 100.0 32 ............................ ATATATTCGCTTGGACGTAGGCCGGTCCAGAA 30839 28 100.0 32 ............................ CAGCCGCAATCCTGACAGTGCATTTGCATAGC 30779 28 100.0 32 ............................ AAAACGAGCTAGAGCGTTTGGGTAGTGTCTCT 30719 28 100.0 32 ............................ AAGGTAGCACGCAGTGAGCCACCTGATCTCGG 30659 28 100.0 32 ............................ TATCCGTTCTGGAACGGCGCTATGTTCAACAA 30599 28 100.0 32 ............................ TCATCAAACGCCGCCCGCACGTCAACCACCTC 30539 28 100.0 32 ............................ GCTACCCTCTCGCGCGTAAGCCGCGCAGCATT 30479 28 100.0 32 ............................ TGCGATAGTGAGGCCTAAAGCCTGCTGGCTCG 30419 28 96.4 26 ..T......................... TGTTCAAGCGCCCAGGCGTAGGCATC 30365 28 89.3 30 C...T............T.......... CGTCAACGAAGCGCAGAAGTATGGGTGAGA TG,T,G,G [30336,30353,30355,30359] 30302 28 75.0 0 ..A........T........T.TT.CT. | ========== ====== ====== ====== ============================ ================================ ================== 41 28 99.0 32 GTGCGCTGCCGCCCAGGCAGCTCAGAAA # Left flank : CACGTTTGCAGCAGCTAATGAGAGCGGACTGGCTAACCGGTATGCGCGACCACACCCAGGTGAGCGAAGTGCTTGCGGTACCTGCAAATACTCAGCATATAAACGTGGCGCGTAAGCAATTTAATACGGGCAGTGAAAGCCGGGCCAAACGTTACGCCAAACGGCATGATATTTCAGAAGCAGAGGCGCGGAAGATTTATGCCAAGTTGGCTGAACGACGCATTGAGCTCCCCTTTGTGCAGATCAATAGCCGCTCCACCCAGCAGCGTTTTAGCCTGTTTATTGAACATAGCAAACCGTTGGCTTCTGCAACGGAAGGCACGTTTAGCCATTACGGCCTAAGCCCCAACGCCACGGTGCCCTGGTTTTGACCCTTTTTTCTAGCATGAAAATTGGCCACCAATAATCAACCACTTAGCGGTGTCACTCTGAAAAGGGTGATACCGCTTTTTTCGGCTAAAGCTCTTTAACAATCAGCACATTAATTTTGGTATGCTCTA # Right flank : GATTTAAGATGTGTACTGGTAGTATCGCTGTGCGGTGCTTTCGGGGTGCGCTAGCGCTCATGCCAAGCTACAAGTGACGTGCATTGGGCGAGTAAGTGGTTAGGCCTGACTGCTTTCATGCGATTTAGTGCTCGACAGGTTGAAACGTTACCGCTTCATCGAAACTGTACATACACTTTTCTGGAAAAGCGTGCAGCTCGCTATCGGTCTCAATCGCTGCTGCGCGGCGTGCATCTTCGTACGCTTCGCTCATCAGTTCAGGTAATGATGCTTTTAGGCTGGGGTTGTCGTTCAGTAAGCGATTCGTTTTGGCTTGGGCATCAATGATCGTCAACCGCCAGCTACGTGAGCGGCGTTCGGGCTGGTGATCCCATTTCAGCAGGTGCATTAACAGACGAGCCAATTGGCTGACCAGCGCGCGCCGTTCGCTTTTGCCCATGCTCTCAATCTCCTCGGCGAGGTGCTCAAGATCAAGTTGCTCCAGTTTCCCCGCCCGCAGT # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCGCTGCCGCCCAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCGCTGCCGCCCAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [16-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [46.7-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //