Array 1 163877-163664 **** Predicted by CRISPRDetect 2.4 *** >NZ_JOGR01000001.1 Glycomyces sp. NRRL B-16210 contig1.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 163876 30 100.0 31 .............................. CCGCGGACGGACTAGGGGTGCCGTGCCTGCT 163815 30 100.0 31 .............................. ACGGCACCATGATCCAGGTCAGCCGCGAGCT 163754 30 96.7 31 ....T......................... GCGCCCCGGAGGAGTCGACGAGCTGGTTGAG 163693 30 83.3 0 ....T.........T.........C..TC. | ========== ====== ====== ====== ============================== =============================== ================== 4 30 95.0 31 CTGCGCTCCACGCACGTGGAGGTGTTCCGT # Left flank : GTGAAGTCCGGCCAAGAGCATGGCCCAGGACCGAGTCTCCTCAAGCGACAGGTCCAACTGGTCGGCCAGCCATTCTTGAAGGTGCTGGGACAGGTATTCGTCCCAGACGCGCCCTGCGAACGCGGCGGCGTCCAGCAGATGACAGATCAATGGATAGGTCCTCGGCCGCTGGTCTTCGGTGCCCAAGCCGCGCGACTTTCCCCAGAGCAGCAACTCAACTAGATTGAAGCTCAACCGGAACCTCCAGAAACCAGAAGTGACATGTGCCAAATCGGATCTTCTCAGCACACGCTGACAATCACAACGTCCGAAAATGGACCGTTGCTCGACGCATGGTTTTGTGTAGGTTCCAGAACCCACAGGCTGGGGGCCAAACGACCATGTCGCCAATGGAACTGCGTTCTGGCTCAGGTGGATCGCCGTGCTCAATGAAGCTGCTCACGCCTCGCCCCGACGCTCAAAACGAACAATCGGCCTTGTAAAGTTGCAGTTCAGAAAGC # Right flank : CGGTCTTCGAGAAGGTATGGCCCTCCGTGACCGCACAGGCGTTGCACCAGCGGAAGGCTTCCGGCGAAAGTGCCGTGGCATGGTTGCGATTCAGCGACTGCCTTGTCCTCATGCCAGCGCCGTGGTCAGCGGATTCGGTGGAATTCGCATAGAGTCGGGCGATGGAGACGCTTGTTGTGGAAGACCTGCTGCTGCTTCTGCTCGATGACGAAAAAGGGCACATCGCCGGGGAGGGCACCCTCTACTACACCCTCGGCGGCGCCGTGCTCCTCGAGCTCGCGCTCACCGGGCGCGTCCGCGTCGAGCCCAAGAAGTCCGCCTTCGGCAGCTCGACCATCCAATCCGTCGGCAGCATCCCTCCCACCGACCCGATCCTCGCCGACGCCTTCACCGTCGTCGCCAAGAAGCCGCGCACCGCGCAGACCTTCATCCTCATGCTCGGCCCGAGCCTCCGCACCAAGGTCACCGACCGCCTCGTCGAACGCGGCCTCGTGCGCCGC # Questionable array : NO Score: 5.61 # Score Detail : 1:0, 2:3, 3:0, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCGCTCCACGCACGTGGAGGTGTTCCGT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.70,-9.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [36.7-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,1.05 Confidence: MEDIUM] # Array family : NA // Array 2 173351-173928 **** Predicted by CRISPRDetect 2.4 *** >NZ_JOGR01000001.1 Glycomyces sp. NRRL B-16210 contig1.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 173351 29 96.6 32 ...C......................... TAATGCAACGTCCGCATCGCCCCCGTCTCCAC 173412 29 96.6 32 ...C......................... CCGGAACTTGCAGCGGACGCGACTACGATTTC 173473 29 96.6 32 ...C......................... TAGGTCAGGCACCACCCGATCTGTGGATCGAC 173534 29 100.0 32 ............................. TGATGGTCGGCCGACTCGGGGCCCTCGACGAG 173595 29 100.0 32 ............................. CGACCGGGCGCGACTACCGGCTCCCCGGCGGG 173656 29 100.0 32 ............................. TTAGTGGGCGGTGGCCAGTCGCAGGCGGCGCT 173717 29 100.0 32 ............................. CGGTCCATGACCGCAACTGCCTGCCGCGCCAG 173778 29 100.0 32 ............................. CCCTGCGCCCCGGGATCCCGTACTCCCGTAAT 173839 29 96.6 32 ...C......................... AGCCTCCAGCTGGCCCGCCCAGCGGGCCTGGT 173900 29 82.8 0 ...C..........T.......C...T.T | ========== ====== ====== ====== ============================= ================================ ================== 10 29 96.9 32 CTGGTCTCCACGCACGTGGAGGTGCTCCG # Left flank : GTGCTTTCAAGTTGCTTCCGCAGATTGTGAAGGACTTGCAGTGGCTGCTGGACCCTGAGAACGCTGACGGGCCTGAGCTGGTGAATCCGCAGTTGGTGCACTTGTGGGATCCGGAGGTCGGAGAGGTCGCTGCGGGGGTCAACCATGCCGATGATGAACCGGACTGGTGATTCATGGCCAATCTTGTCGTCATCTCGACTACGGCGGTGCCGGAGCATGTTCGGGGCGCTCTTACCCGATGGATGGTTGAGCCGACGCCGGGTTTTTATGTTGGGACGTTGTCCGCGAGGGTCAGGGACGAACTGTGGGAGGCGGTGAGCGGCTCGGTGGGGGAGGGGGCGGCGAGTTGCGTCTACCCGCATGTGGAGCGGGAGCAACGGTTCGTGATCCGGACGGCGGGCACGCGCCGCCGCAGAGTTGTGGACTTCGATGGTCTTCAGCTCATCCAGTTCGAAGCAGAAAACGAACAAGAGCCGAAGTAAACTCCCAGTTCAGGGAGT # Right flank : TGGCAGGAACTCTGGGCCCAGCAGGGGCCGGTGGCTGCGCTCAACCTACGTGGTTGACCCAACGTGGCTGGGTTGGACATGGTTGCGGGCTTGGGGGAATATCGGGGTGCGTGGATGACCGGGGTGGTCTTCGCAGGTTGGGCGCCGAAGAATAGGGAGAGTGCTGATGTCCTTTGGGAACTCCTTGGTTGATCTGATCTTGCTTCTTCTTCAGGGGCGCCGGTGGTGGGCCGGATCGGGTTGATCCGATCTATTGCGTTGCGGGGCATGTTGTTGGTGCGCAGCGAGGTTTATCGGCCCTGAGTTTTCGTGTATTCGTTGGAGTTGGGTTGTTTTTGCGGTGTTTTGAGCGCTGGCATTGTTGTTTTTAAGGGCGGGCTCAGGGCTGGGTTTCTGCCCGCTTTATTCGGTGCCGCCTGGGTTCTTTCGGTGTTCTGTCAACCGGTTGGGGGACAACCTGGTTCCCTCCTTTGGTCGTCGCGGTCGGGGCTCTTGCGGTT # Questionable array : NO Score: 6.03 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGGTCTCCACGCACGTGGAGGTGCTCCG # Alternate repeat : CTGCTCTCCACGCACGTGGAGGTGCTCCG # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCTCCACGCACGTGGAGGTGGTCCG with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.40,-8.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [51.7-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //