Array 1 231726-228043 **** Predicted by CRISPRDetect 2.4 *** >NZ_LVEP01000002.1 Flavobacterium crassostreae strain LPB0076 LPBF02, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================== ============================== ================== 231725 46 97.8 30 A............................................. TGAGAAGTAAATGGGAAGCGCACAACTCGG 231649 46 100.0 30 .............................................. TTGCAGCAAGTACTTTTTTAAAGCTGGTAA 231573 46 100.0 30 .............................................. TTATCTTCGATTAATTCATCGTTTCCGCTA 231497 46 100.0 30 .............................................. GGAGCAGATAAACAAAGAGCTGGAACAGCA 231421 46 100.0 30 .............................................. TTTCCATTTTGTTTTGTTTTTTAGTTCAAT 231345 46 100.0 30 .............................................. AGCAGCTTCCAAAGCTTATTGAGCGGATCA 231269 46 100.0 30 .............................................. CTTGCTGATAATAACGACATTAGAAGCATC 231193 46 100.0 29 .............................................. GGTAGTTGAAGCAAGCATCCCGTTGGCTA 231118 46 100.0 30 .............................................. AAACAATTATGGAAAAATACGTAATGTTTG 231042 46 100.0 30 .............................................. ACGCTTGTTTGCTGCTGAAGTATTAATGAA 230966 46 100.0 30 .............................................. ACGACGAGAAAAACGTTTGTACTGTTACTT 230890 46 100.0 29 .............................................. GCGGAAATAGAGAATTAATGAAGTTTATT 230815 46 100.0 30 .............................................. TGACACCTCGGTTAATGCTTTAATCTTGTT 230739 46 100.0 30 .............................................. CGGCTGGTTATTTCGCTACCAACGGAAACG 230663 46 100.0 30 .............................................. ACGTTAAGAAAACCAAAGGAGATTTTGACA 230587 46 100.0 30 .............................................. AAAAGTATGATTATAAACGTGAAATATGAT 230511 46 100.0 30 .............................................. AAAAACGGCAAAGCTTAGTTCCGAAGATTT 230435 46 100.0 30 .............................................. ATTCATGGGGCAATTTTGTTGCTAGCTTAG 230359 46 100.0 29 .............................................. CACCTCAGGGATTATTCCGAAAGGATTAA 230284 46 100.0 30 .............................................. TTTTAACAACTTAAGTATTTCATCAAGAAT 230208 46 100.0 30 .............................................. TAGCACTTGTGGCTTCATCGGTCACTTTTT 230132 46 100.0 29 .............................................. AGTTTCTGTTTTGGGGCGAGTACTTACTA 230057 46 100.0 29 .............................................. TACCAAATAATCGGTATTGCGATTAATAA 229982 46 100.0 30 .............................................. ATTTGAAACTAAAGAAAAAAGAGCATACCT 229906 46 100.0 30 .............................................. CCCAATTATCGGCTAAACCTACGGCAGATA 229830 46 100.0 29 .............................................. GGCTAACTATTCCGAAATGCTTGCGTACT 229755 46 100.0 29 .............................................. TCAATGGGCTAAGACAGACTCAGTTTTCA 229680 46 100.0 29 .............................................. AGAAGCGAAAAAAGAAAAGTTAAAAGCAA 229605 46 100.0 29 .............................................. TAAGGGGCTGGCTAATCGTACTAAGTGGC 229530 46 100.0 30 .............................................. TACAATTAAAAGCGATGCTACTTAAAAAGA 229454 46 100.0 30 .............................................. TTTTTTCAATTTCCAACTCCATAAATTCGG 229378 46 100.0 29 .............................................. GATATGACGGCAGGCAGTATCAAGAGCCG 229303 46 100.0 30 .............................................. ACACCTCAGGCATAATACCGAGAGGTTTAA 229227 46 100.0 30 .............................................. TGTACGCTTCGGTTGCACCCTCTTTTCCTA 229151 46 100.0 30 .............................................. TTAGAAACTTGGCTGAGTTTCCTGAGATGT 229075 46 100.0 30 .............................................. ACACTATTCCACGTGCTACGGAGCTTATAT 228999 46 100.0 29 .............................................. AATATTTATTTCGATGTTAGCGGATTAAT 228924 46 100.0 30 .............................................. GAGGCTAAATATTCCGAAATGCTGGCATAC 228848 46 100.0 30 .............................................. CTACATTCTTTTAATATTCGGACGTATTCA 228772 46 100.0 30 .............................................. ACAAATCAATTCTCAATTTCTCAGGTAAGC 228696 46 100.0 30 .............................................. AACTTGCGAAAAAAGGCTCTGCTGATGAAG 228620 46 100.0 30 .............................................. TTAATTTCCACAGCCAATCATACCACCCCG 228544 46 100.0 30 .............................................. TAAATGGATGGATGGAAAAACAGATTCTTT 228468 46 100.0 30 .............................................. TCAGTTCAAATTCTCGTTATCGGCTACCAC 228392 46 100.0 30 .............................................. CAGACAACCAAAAGAGCGTTCTGGCACTGA 228316 46 100.0 30 .............................................. TGAATCAAGTTTTCACATTACCCACAGGCT 228240 46 100.0 30 .............................................. CGGAGCAGTTGGTAAACAAGGTATCACTTC 228164 46 100.0 30 .............................................. CTAAGCCTTTCACAAATAATGCCGCCCCCT 228088 46 100.0 0 .............................................. | ========== ====== ====== ====== ============================================== ============================== ================== 49 46 100.0 30 GTTGTGAATTGCTTTCAAAATTGTATTTTTACTTATAATTCCCAAC # Left flank : GTTCTTTAACAGACATTATTTTATCAGAGCCAGCAATGATATTTAATGCCTCAACGAGATCTACCATAGATAAAGAGTCATAATCCTGCATGGGTATTTCATGGCGCTCTTTCAGGGTTTGGTCTTCGCTTTCTTCGGCGTTAGAAGCATCAATAGAACGCAGTGCCCTTTGTGAATCCTGCTCTAAGGATTGCTCACTTATTCCAGCAATTGTATTTTCCGTTGCGTCTTTTTCAGGAGCTGTGGTTTGTTTTTTTTCGAGAGACTCTAGTGCTGATTTTCCATCTGCATTTTGCAGGTTATCATTCTTTTCTTCTAACATTGGTTCAATGTTTAAGGTTGCTAATAAATTGAACTCGAAAGATAGTAAAGCAGTATTAAATAAAAAAATAATTATCTAATTAAGAGTGGTTTTAGGGTACAAAAAGGTTTTTTTATTTCTCAGAATATAACATCCCAAAATTACATTTAAATTTCAGAGGTATAAATTAGTAGCTCCA # Right flank : ATACCGCGATTTAATCGTTTGATATGTTGGTAGTTATGGGTTTGTTTAGAAAATAAAAATGGATTCTTAAATAGTGCTAATCTTCAGCTTGTTGTAGGTTTTTGGAATTCTAATTTTTAAAAAAGTTCCAATTGTTGCGAAGGTTTATCTGTTTCTACCGGCTTTTTGCCATAAAAAAGTTCCATCATTCCAAATTGCTTGTCCGTTATTTGCATCACACCAATTTTGCCGTGCTCGGGTAAACTATTCCTAATTCGTTTGGTGTGTACTTCGGCATTTTCTTTACTGGCACAAAAACGCATATAGATAGAAAATTGAAACATAGAAAATCCATCGTCCAATAATTTCTTTCGAAATCCACTGGCAATTTTGCGCTCTTTGCGTGTTTCTGTAGGCAGGTCAAAAAATACTAATATCCACAAACTTCTATATTGATTTAATCGGGTGTACTGTTTGTCAAACATATTTATTTCAAAGCTGTTTAACCGTAGACAGGATAC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAAAATTGTATTTTTACTTATAATTCCCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.91%AT] # Reference repeat match prediction: R [matched GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTCCCAAC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-1.60,-2.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,4.87 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //