Array 1 42982-43429 **** Predicted by CRISPRDetect 2.4 *** >NZ_WTEW01000004.1 Gilliamella sp. Pas-s27 NODE_4_length_127005_cov_216.147920, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 42982 28 100.0 32 ............................ AACACAATCACAAAATCCAAAGATCCTTTTTT 43042 28 100.0 32 ............................ GATCTGATAGTAAAGCATTTGCTAGATCAACA 43102 28 100.0 32 ............................ ATCTTGGTTTGTTGTCCATTCATTAATGAAAC 43162 28 100.0 32 ............................ GAACGAATCAGAATAAAAATAATAGCCATTAA 43222 28 100.0 32 ............................ ATCACTAACAACTATCAATTTAATTTTCTTAT 43282 28 100.0 32 ............................ TGAGCTTTGATTTCGTTGATGTGTTTTTGTGA 43342 28 100.0 32 ............................ ATCGTATCGCCCAAAATTTCTTTTTCGATAAT 43402 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 8 28 100.0 32 CTTTAACGCCGTGTAGGTGGTTTAGAAA # Left flank : TCAAGTCAGTAGCCTCAGCACTTCTAGCAGCGGATATGCTGTTTGCACTACACCTTAGTTTTTAGCGTTTAGTTCTTAATCCTAAGGGCGTGGTGGTAGTTATGGTGCAAATAGAGGTTAATATAGTAAAGAATAAAGCCCTAGCATAAGTTGGGGCATTACCTTAGAATTGCGTTGTTTTGTTAAATCACCTACACGGAGTTAAAGTTTGCGGTGCTTTAGCTATGACTGTCAGCGATTTTCTAAATTGCCACAACAGCGCTATCCACGTCAAACAACTAATCACATTTACAAATAAAAAGTGTTTACAAAAAATATTGATTTTATGTGATTTATTTTTTAGGTATTTTCTGAATACAAACCCCCACAAACCCTTTTTTTAACGATAACTTAAAACGCAATAAAATCAACATATTAAAAAATATCTCAAAAAAAGGGTTTTCAAAGCTAAAATTGTCGTTTATCTTTATACAACAAGATTTATCGAATCTTAAGTTCTA # Right flank : ATAGGCGTCTGCATTTTGTTGCTTCGTTGATAGCTTTAACGCCGTGTAGGCGAAGGACATTATTTTTCACAAAAATAAGTCAGAAAAGGTATTGATTTTATTGAAGTTTTTATTGGCTGTTTTTTTGATAAAAAACAGCACTCTTCCCCCTAGCTCACTTCCCTTTGAATTTTATTACTTTTATGCCAATTTTAAGTATATAATCGGCACAAATCCCTCTACTATGTATTGTTATGACTAAGATATCTTCGTTTCGTCAAAAACAGAGCGTTATTTTTATTGCTTTTTTAGCCACTACGTTTATTGTCGGTATTGCAGGGGCGTTGCAATCGCCTACGTTAAGCCGTTTTTTATCGTTTGAAGTAAATGTTAATCCCCGTTTGGTGGGGTTGTTTTTTTCGGTGAATGCGTTAGCAAGTATTATTGGTAGCTTTTTGTTAGCTAAATATTCAGACAAAAAAGGCGATAGGCGACATATTGTTATATTTTGTTGTTTAATG # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTAACGCCGTGTAGGTGGTTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.40,-0.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [75.0-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0 Confidence: HIGH] # Array family : NA // Array 1 23141-23471 **** Predicted by CRISPRDetect 2.4 *** >NZ_WTEW01000005.1 Gilliamella sp. Pas-s27 NODE_5_length_120881_cov_282.939526, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 23141 29 100.0 32 ............................. CCCTACCAATCATATATATAAAAAAAAGAACT 23202 29 100.0 31 ............................. AGTCAGTGACGTTTTCGTAGCTATCGCCATT 23262 29 96.6 31 C............................ TGTCCCCATTCCACTAACACTGGCTCCGGTA 23322 29 100.0 31 ............................. ACCGTTACCGCCTGATGATAAAAAAACACAG 23382 29 100.0 31 ............................. ATCAACGCCAAGATAACCTTGCTTTTGTTCA 23442 29 86.2 0 T....................AA..A... | C [23462] ========== ====== ====== ====== ============================= ================================ ================== 6 29 97.1 31 ACCTTAACGCCGTATAGGCGGTTTAGAAA # Left flank : ATTAATGATTATTTTTATTAATACCTAATTCTAAAATAAAATAAGGTTAATTTCTTGTTATTTTTCAAATATGATTTTTGAAAATGGTGTGAGGTTTTTTATTGGGGGAATTTTCTATAAAAAAACATACTATCAAATGCTCAAAAATTAGTCAGGAAAGGTATTGATTTTATTGAAGTTTTTATTTGACTCTTTTTAAGCAAAATCAACCACTTGCATAACTAGCGTTAAATACCAACAACTAACAAACCCGTAAAACCAATAAAAGCACACTCTGGATAACTGCATTTAATCGCAAAAAAGTGGTCAGGAAAGGTACTGATTTTATTAAAGTTTTTTCTATCCGTTTTTTTGAATATAAACCTCTACAAACCCTTTTTTTTACGATAATTTAAAATTAAATAAAATCAATGCATTAGAAAACAGCTTAAAAAAAGGGTTTTCAAAGCCAAAATTGTTGTTTATCTTTATATAACGAGATTTATCAAATCTTGAGTTCT # Right flank : AATAAAATTAATCACATAATTAAAAAACAATCGGCTATACTATCTGCCTTATTCAGGCGTCAGAATGTGCCGACAACAGAGCGAGGTTAGCACGCCAAACAGGGATGTTTGGCGAGTTTGTGGCGCGCTTGACAAATTTGTCTGGAACAAATTTGAACACCTGAGCATAGCGAAGGTGGCCTCGTAGAGGCGAGTATCAGGATGATACGAGTATTGCCGAAGGCCACATTCTGCAGCCAAAGCGTGGGATTGCTAAGGGAATTCGCTTTAAATTCCCTTGGCTCGGACGTGGTCACTGTGGCCATTTTATTCACCCAAAGGTCAAAACGTCCGAAACCACCGCACTTAATTTATTCTATTCACAAAAACAAAAAAAGGCCTGATTTTCCGCTAAAAAATCAGTTAGGAAAGGTATTGATTTTATTGAAGTTTTTATTTAACTCTTTTCAAGCAAAATCAACACTAACATCAGCTTAGAACAACCTCCTCATTGCTATCAA # Questionable array : NO Score: 3.11 # Score Detail : 1:0, 2:0, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ACCTTAACGCCGTATAGGCGGTTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.17%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.30,-5.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 1 80261-80528 **** Predicted by CRISPRDetect 2.4 *** >NZ_WTEW01000008.1 Gilliamella sp. Pas-s27 NODE_8_length_93366_cov_196.358036, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 80261 28 100.0 32 ............................ AAAGCGAGTGGATGCTTGAACAAATAAGAGGG 80321 28 96.4 32 T........................... AATGCAAAAGCATTTTACGACATTTGCAAAGC 80381 28 100.0 32 ............................ TGCTAGAATAGCCGTTTCAGCATTTAAATATT 80441 28 100.0 32 ............................ GTCTTTCGTATCGCAACGATAATAAATTTTTG 80501 28 96.4 0 ................A........... | ========== ====== ====== ====== ============================ ================================ ================== 5 28 98.6 32 CCTTAACGCCGTATAGGCGGTTTAGAAA # Left flank : ATGGTAAATCGTCTAACAAAGCATCGTGATAAGTGATCATCTTCTTTGTGGTAAGTGATAAAAGGAGATTATTGTAGTTTTATTATGTGTTATAGGCAATAAGGGATATTTTGATTAAAAAAACAAATAAAGTTGATGATGATTTTTTATTTAAAAAATCCAATAAAATCAATACCTTTTCTGACTGTTTTTTTATGTAAAAAACACATAAATTACAATCACACATTACAACCAAACAAAGGTATATTTAATTATAGATTTTATTTTTTGATTTCCTAAATTTAAAAAAATCGTATAAAAATTTGTCAGGAAAGGCATTGATTTTATTAAAGTTTTTTCTGTGCGTTTTTTTGAACACAAACCTCTCCAAACCCTTTTTTTTACGATAATTTAAAACTCAATAAAATCAAAATATTAGAAAACAGCTTAAAAAAAGGGTTTTCAAAGGCAAAATTGTTGTTTATCTTTATATAACAAGATTTATTAAATCTTGAGTTCTA # Right flank : ACGGGCACATTTGGCAACAGCTGAGCACAGTGAAGATGGCCTCGTAGAGGGAGTATCAGGATGATACGAGTAGCGTAGCCGAAGGCTACATTCTGCAGCCTTGCGAGGGTTTTTAGGGGATTTCGCAAAAAATCTTCTAAATCGGATGTGATCACAACAGCTATTTTATCCACCCAAAGCCTAAACGTCCGAAACCACGGCACACAACCCATTTTATGTACTAACAAAAAAGAACTATTTTGATAAAAAAGCGGTCAGGAAAGTTACTGATTTTATTAAAGTTTTTTTGAAAATTATTTTAAGTAAAATCAGCTGTTTATATAAACTCGTATTAATCAATGGTTCAAATAAGAGATAATTTTGCCTCAAATTTTTCAAAATAGTACATCTATTTATTTCATATTTGAAGTTTTTAAAAGCGACATAAGTCGCTTTTAATCTTTGAATTAGTCAGTCCATTTTCCTGTATTAGTTGGTCTATTAAGACTAATCATTGCTTT # Questionable array : NO Score: 2.99 # Score Detail : 1:0, 2:0, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCTTAACGCCGTATAGGCGGTTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.30,-5.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA // Array 1 1446-1774 **** Predicted by CRISPRDetect 2.4 *** >NZ_WTEW01000020.1 Gilliamella sp. Pas-s27 NODE_20_length_47075_cov_211.678251, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 1446 28 100.0 32 ............................ GAACATCTATAGAGTCAACAGCGTAACCGTCA 1506 28 100.0 32 ............................ TAGCTCCCTCTAAGCTGAGGAAAGGATAACGC 1566 28 100.0 32 ............................ GTTTGGTTGACTGGTTAGCTGATTATTACGAT 1626 28 100.0 32 ............................ AACAGTTCGTGAGACTAACTCCGAAATATGGG 1686 28 100.0 32 ............................ AAAAGGCGCTAGAGTAACTATAAAATACAACT 1746 28 89.3 0 ....................AA..A... | C [1766] ========== ====== ====== ====== ============================ ================================ ================== 6 28 98.2 32 CCTTAACGCCGTATAGGCGGTTTAGAAA # Left flank : TTTGTGGAATTACTCGTATCATCCTGATACTCGCCCCTACGAGGCATCTTCGCCGTGCTCAAATGTTCAAATTTGTTCCAGACAAATTTGTCCTCCACCGACGCTCGGTCTTAACGCACCGTTTGTGCAATTACTCGTATCATCCTGATACTCGCCTCTACGAGGCCACCTTCTCTATGCTCAGGTGTTCAAATTTGTTCCAGACAAATTTGTCCGACGCCGAAACAAGACAACAACATAACCTTAGGTCTTTTTTGTGAGTTGTTTTTGTGTTAAAAAGCAATGCAAAAACCCCAAAAAAGTGGTCAGGAAAGGTACTAATTTTATTAAAGTTTTTTCTATCCGTTTTTTTGAATATAAACCTCTCCAAACCCTTTTTTTTACGATAATTTAAAGTTCAATAAAATCAATACATTAGAAAATAGCTTAAAAAAAGGGTTTTCAAAGTCAAAATTGTTGTTTATCTTTATATAACAAGATTTATCAAATCTTGAGTTCTA # Right flank : AATAAAGTTAATCACATAATTAAAAAGCAATCGGCTATGTTATCTGTTTTATTCCGGCGTCAGAATGTGGCAACAACAGAGCGAGTTTGTGGCGCGCTTGACAAATTTGTCTGGAACAAATTTGAACATCTGAGCATAGCGAAGAAAGCGAATATCAGGATGATACGAGTATTGCCGAAGGCCACATTCTGCAGCCAAAGCGTGGGTTGTCAGGGAATTTGCTTTAATTCCCTGACTCGGACGTGGGCACTGTAGCCATTTTGTTCACCAAAGGTCAAAACGTCAGAAACCACCGTACCAACCCCATTCTATGCACCAACAAAAAAACATCATTTTGATGAAAAAATTGGTCAGGAAAGGTGTTGATTTTATTGATGTTTTTTCTTGTTGTTTTTTAACAAAAAAACAACATTACGCCCCCTGATTTGTCAAAAACAACCCAAGTGATGGATTTTGCGTTTCGTTATGAAAACCATACCCCAAAGCTTTCAAATGCTGAT # Questionable array : NO Score: 3.17 # Score Detail : 1:0, 2:0, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCTTAACGCCGTATAGGCGGTTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.30,-5.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [78.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 1 108587-109276 **** Predicted by CRISPRDetect 2.4 *** >NZ_WTEW01000001.1 Gilliamella sp. Pas-s27 NODE_1_length_245691_cov_233.540984, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 108587 28 100.0 32 ............................ ATGTTCAAAATCCAAGAGCCGAAGGTAATTAC 108647 28 100.0 32 ............................ ATCACCGTTTCATCATCGCTAAATAATCCTTT 108707 28 100.0 32 ............................ TCCGCCACAAACTCCATTTGCCACCATGCTAA 108767 28 100.0 32 ............................ TTGGTATAAGGGCTAATCTACGATTACAGCGC 108827 28 100.0 32 ............................ ATGCGAATCAGACGGGGCATTAATTCCTGCTC 108887 28 100.0 32 ............................ GCCAGATAATGCGATTATCGTTGAGATGAATT 108947 28 100.0 32 ............................ TTATGAAGGGTATGTTTCATTACAAGATGAAG 109007 28 100.0 32 ............................ AGTCGTGAGCCTCGACTAATTCAGCATCAGTA 109067 28 100.0 32 ............................ CTTCAAATGCAGAGAAACCACCAAGATATTTT 109127 28 100.0 32 ............................ TACTATTGAAAATCTTCCACGAACTTTTATAT 109187 28 100.0 32 ............................ AACAAACTCACTACTTTCGTAGGTTGGTAGCA 109247 28 96.4 0 ........................A... | AA [109268] ========== ====== ====== ====== ============================ ================================ ================== 12 28 99.7 32 CTTTAACGCCGTGTAGGTGGTTTAGAAA # Left flank : TATTGCTGGCGACATCATCAGACAAACCCCAGCAGATATTGTTTATCACCGTATATCTGCTAACGCCAGAAAGCCAACCTTACTTGCGCCAGAATGGTGTGAAAACCACTGGCAATCAATGAATGCCGTTGATCATAATTTGCGTCAATATGGTGTTCAAGGCAGCGCCATTGGGGATGAGTATTGTTTTAAGGGGTAGGGAAGTGATTTTTTAAAACATGATAAAATAAAAATTTTAATAAAATCAATTGCATTTCTAACTTCTTTTTTATAAAAAAACATGCGATTACTGCCTAAAAATTATTTAGGAAAAGTGTTAATTTGATTAAATTTATTTTCTGTCTATTTTTTTAAATGCAAAACTCGACGAACCCTTTTTTTTACGATAATTTAAAATTCAATAAAATCAAAATATTAAAAAATAGCTTAAAAAAAGGGTTTTCAAAGCCAAAATTGTTGTTTATCTTTATATAGCAAGATTTATCAAATCTTGAGCTCTA # Right flank : AATAAAATTAATCAGATAATTATAAATAATAATCGGCTATATTGTCTGTCGTATTCCGGCGTCAGAATGTGCCGACAACAGAGCGAGGTTAGCACGCTAAACAGGATGTTTGGCGAGGCTATTCTCTGTCTGGAGCGACAAATTTGTCTGGAACAAATTTGAACATCTGAGCATAGCGAAGATGGCCTCGTAGAGGCGAGTATCAGGATGATATGAGTAATCCCACAAACGGGTGCGTTAAGAGCGAGCGACGGCGGAGGGTAGCCGTAGACCACATTATGCAGACAATGCGTGGGGTTTTTAGGGGATTTTGAACTGCCCCCCAAAATTGGACGTGACCACAACAGCTATTTTGATCACCAAAATCCCAAACGTTCGAAACTACTATACCAATCCACTCTATCAACCAACAAAAAAACATTATATCCCACACAAAATTGTCAGAAAAGATATTGATTTTATTGATGTCTTTGTTTTGTTGTGATTTTAATAACTTAAAT # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTAACGCCGTGTAGGTGGTTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.40,-0.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 1 31559-31888 **** Predicted by CRISPRDetect 2.4 *** >NZ_WTEW01000021.1 Gilliamella sp. Pas-s27 NODE_21_length_44535_cov_235.173071, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 31559 28 100.0 32 ............................ GCAACGAATTCTTCAACAGAGAATAAATCTCC 31619 28 100.0 32 ............................ ATTGTGGTCATACGTAAAATATTTCATAATTT 31679 28 100.0 32 ............................ ATCAAAGCAATACGAATCAAGCCAAAACTGTT 31739 28 100.0 32 ............................ AACTAAATATTCCGCGCCCAGGATCTGCTCCA 31799 28 100.0 32 ............................ GATCACATGATGGGAGTGTGCGGTTTTGGACT 31859 28 85.7 0 ................AA.A...T.... | TA [31880] ========== ====== ====== ====== ============================ ================================ ================== 6 28 97.6 32 CTTCAATGCCGTGTAGGCAGTTTAGAAA # Left flank : AAAGCAGATATACAGCAAAAATCATCGATTAGTGATTATGCTTTATTGATGGCTATCACAACAGTACCGACGACGATAAAAGGCCATTTACGTTTTAGTCGTGTTAATCCTAAAGGTCAGAGTGCGTTAAGACGTGCCGAAAAACGATTAACCGCACAAGGAAAATGGACACCTGAAGTAAAAAATAAAATGATTGAAAAGTGGGGAAGTGTTCATTTGCAATACCCACATCTTCATTTGAATAGTAAAAGTACAGGTCAAAGATTCATTTTGTGGTTAAAACAAGAAAAATGCCCAGAGCCTGTGCAAGGCACATTTAATAGCTATGGACTAAGCCAAAACGCAACAGTTCCTGATTTTTAAATCATTAACCCTTTTTTTGAGGATGATTTTAACATATTGATTATTATTAATATTAAAATAGACTCAAAAAAAGGGTAAAAATTGGGAAAAGTGCAGTATGCTCTTTTACAATAAGGCATTATTGAAATAAAATTCTA # Right flank : AACTTTCGGATTGAATTTTAACCATTATCATAACTATTCTACCCCAATTTGCGTACTCACTTTTATTTCTCGATTATCAGTAATTTCTAAATTTGACAATACCGCTAATTGAGGAAAATTAGGTCTTAAAAATTGTGAAAGCATTGGTCTTAATGTATGGTTTACTAATAATACTGGTGGTGCACCAATTGCCTCTTGTTGATTAAGCGCTTTTTGCAGTTGCTCAATAATATGTTCAGCAAGCCCTGGTTCAAAATTGCTAGTATTTTGGAGAGCTTGTAATAATAAACGTTCTAAATTAATATTTAACCCTATTACATTGATTGGTGCTGTACCGGGGAACCATTGCTGAGTAATTACTCTACCTAACGCGATTCTTACCATACTAAGTAATTGATAAGTGTCACTTTGGGTTGGTGCATGCTCGCAGATTGTTTCAATGATAGTTCGCATATCTCGAATTGAAACCTTTTCTGCGATCAAGTTTTGCAGTATTTTAT # Questionable array : NO Score: 6.14 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCAATGCCGTGTAGGCAGTTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: F [matched CTTCACTGCCGTGTAGGCAGCTTAGAAA with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.70,-4.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 69097-68829 **** Predicted by CRISPRDetect 2.4 *** >NZ_WTEW01000002.1 Gilliamella sp. Pas-s27 NODE_2_length_135351_cov_200.318262, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 69096 28 100.0 32 ............................ ATTCAATTAATAACTACGATGATCGCCAAGGA 69036 28 100.0 32 ............................ ATTCATCCGTTCGCTGTTCCATTATCAGCCTC 68976 28 100.0 32 ............................ TCTTTTATGTCATTTTTAATATTTTTAGAATC 68916 28 100.0 32 ............................ TACACGACATTAAAGGTCAATAAAATTTTTAA 68856 27 89.3 0 ..............-......A..A... | A [68835] ========== ====== ====== ====== ============================ ================================ ================== 5 28 97.9 32 CTTTAACGCCGTGTAGGTGGTTTAGAAA # Left flank : ATTTCCTTTCTGAACTAAAAACCCAACACGCTAAAGCTATGCTAATACAACCCCAAGTGGCAGGAACCATTAGCGTTACCCCCAAAACTATTGCACAAATCCAAGGCATCCAATTTCAAGCTAAAGCAACTCAATTACAAAATGAACAAGCCAAGCAAGCCTATGGACAATATTATCGAGCGTTTCCTTTTGCAAGGGTTATCAAAGCACCAATTTGGGAATTAGAACTACAAAGCATAAAAATGACCAACAACTTATTAGGATTTGCTAATAAAACGCATTGGGTAAAACAACAAGACACATAAAACAAAAAAACTATTGTCTGCCTTCAAAAGTTTTTTAGGCATTTTTTTGAATACAGAACCCTACAAACCCTTTTTTTACTTTAATTTAAAATTAAATAAAATCAATCTATTAAAAAATAGTTTAAAAAAAGGGTTTTCAAAGCCAAAATTGTTGTTTATCTTTGTATAGCAAGATTTATCGAATCTTAAGTTCTA # Right flank : ATAAAATAAATCAGTTAATTATAAAAAATAATCTCAAAAAATAATTGGCTATTTTGAATCCCCAAAGTCCAAACATCCCAAGCCACCGCACCTAATCCATTCTATTCACTGCCAAAAAAGGTATTATTTTTTACAAAAAAACGGTCAGGAAAGGTATTGATTTTATTGAAGTTTTTGTTGGTGATTTTTAACGCTAAAATCCCCCCAATAATCTGCTCTAAAAACCTCCACTAAGCGGCTATGATTCAAGATAGCATTAGTCACAATCCTAATTCTACGTTAAAATAACTAGCGTTATTACGCTAAATTACCAAGGAAATCGCATGACAACTGAAATGACAACACTCGACAAAATCAAAAAACAAATTGCCGATAACCCAATTATTTTATATATGAAAGGTTCGCCAAAATTGCCAAGTTGTGGCTTTTCGGCTCAGGCAGTGCAGGTTTTGTCGCAATGTGGTGAAGCGTTTGCTTATGTTGATATTTTGCAAAACCCT # Questionable array : NO Score: 2.96 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTAACGCCGTGTAGGTGGTTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.40,-5.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [85.0-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.78 Confidence: MEDIUM] # Array family : NA //