Array 1 81-4909 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJTE01000138.1 Flavobacterium psychrophilum strain KKOK-1706 contig00138, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================== =============================== ================== 81 46 69.6 29 TAAT.T....A.ACC...CGGGT....................... TTTTGTTTTCGTCAAATTCCCCATTTGTG 156 46 100.0 30 .............................................. ATTAATGCGCTAATTATCGAAGGTAGCACT 232 46 100.0 29 .............................................. AAGTACATCCCCAGTATTGAAACTATGCG 307 46 100.0 30 .............................................. AACACCCAAACATAAGAGATGAAACATAAG 383 46 100.0 30 .............................................. GCAGACGCCCAAGGAATACAAGCAGCTGCA 459 46 100.0 30 .............................................. CAGTTTTTTGAAATGGGTGTAGATATTCTT 535 46 100.0 30 .............................................. TTGTCCATTCTAGCAGGTAGTAGAGATATA 611 46 100.0 30 .............................................. ATTTCTTCATTAAGAAGCCGCACGTTAATA 687 46 100.0 30 .............................................. AAGTCGTGAATAAAGATATACACGACCCTC 763 46 100.0 30 .............................................. ACTATGATTTTTAATAATCGGATTACCTGC 839 46 100.0 30 .............................................. TTTGAAATCTTTTCTTGCTTGTTCAGTTAA 915 46 100.0 30 .............................................. TTTGGATCATTCCGCATATTTGCATCATGC 991 46 100.0 30 .............................................. TGAAACTATTGAGGTAACAAATGAAATGTA 1067 46 100.0 30 .............................................. ACGACCTACCTTATTAACAAATGACTTTTC 1143 46 100.0 30 .............................................. ACGAATTAATAGCTTTTAATAACGCGTTAT 1219 46 100.0 30 .............................................. CTTTTGTGTTGTTTTATGTTGTACATTCGC 1295 46 100.0 29 .............................................. TAGATAAAAGAACCTTTTGTTCGTCTTTT 1370 46 100.0 30 .............................................. CTTTCGCAAAAGGAGTTGATTCAAAAAATG 1446 46 100.0 30 .............................................. AGAATAACAAGAGATACTAATACATCATTT 1522 46 100.0 30 .............................................. CTATTCATTGAATAAGCATTGAAGGTATCA 1598 46 100.0 30 .............................................. TTGATGACTGGGAGAGCCATTATGACGTAG 1674 46 100.0 29 .............................................. ACATTACAATATAATTACGGCTTTGAATA 1749 46 100.0 30 .............................................. TTTGCCCAACAGACCCTTCTCCTAATTCCG 1825 46 100.0 30 .............................................. ATTGAGGTACTTAACATTATTATCGCCACG 1901 46 100.0 30 .............................................. TGATTATGAGGTTTCTAATATAGAAAGGTC 1977 46 100.0 30 .............................................. AATCCCCCAGAAAACAAGCTAAATGATTCC 2053 46 100.0 29 .............................................. TTGTTCAATTTAATGAATAAGGTAATTGT 2128 46 100.0 30 .............................................. GGATAAATAGTATACGGCAAATCTAACTGA 2204 46 100.0 30 .............................................. CCATTTGGGAAGCACAATTTGGCGATTTCA 2280 46 100.0 30 .............................................. TAATTTAGAATTTTTCATTTTCCCTCATGG 2356 46 100.0 30 .............................................. TTATTGATACCTTATTTGAATCTACTTTTA 2432 46 100.0 30 .............................................. GCGTACTCACAAGGGAAGATTCATCCAACA 2508 46 100.0 30 .............................................. ACGCTTGACAAAAAATTAAGCCTATTTTTG 2584 46 100.0 29 .............................................. TCTCTGCTTCTAATGAACAGACTCTTTAT 2659 46 100.0 30 .............................................. CAGGTAAAAATCTAATAAGCGTACCAGGTA 2735 46 100.0 30 .............................................. CGTAACTGATCCACCGTGATTTACGTTTCC 2811 46 100.0 31 .............................................. AACGCTGGACTTAAACATGAGTATCGAGTTA 2888 46 100.0 30 .............................................. CAGGAAACAGGATTCTAAAATGGAAAAAGG 2964 46 100.0 30 .............................................. TCACTATTCTTTGGGGCTTGCGAAGACTTC 3040 46 100.0 30 .............................................. TTAATTTTTAAAAAGAAGATATGGCAAAGT 3116 46 100.0 30 .............................................. AAAAAAAACAATATATGAGTCCTACTTTTG 3192 46 100.0 30 .............................................. TAAAAAGGGTATTAGGCACGCCTTTATACG 3268 46 100.0 30 .............................................. AGCAGTAGGTTCGCAATATACTTTGAATGG 3344 46 100.0 30 .............................................. CAACGTTCGTAAAACTATTAAGAGAATTGG 3420 46 100.0 30 .............................................. CGTTGGTTTCGTAACAATGCATTATCTCTT 3496 46 100.0 30 .............................................. TGATTGTCCAGAAAGTGGTCAACCTTTTGG 3572 46 100.0 30 .............................................. AACTTTTGGGCGCAAGTGAATGTAGGCATA 3648 46 100.0 30 .............................................. AACAATAAACGAGAGTCGAGAATACTTAGT 3724 46 100.0 29 .............................................. ATAAAAAAGAAATAGAGAGTATAGATAGT 3799 46 100.0 30 .............................................. TTTTTTTAAAAACAGATAAAGAGCAACTTC 3875 46 100.0 31 .............................................. TGATGTTGTGGTTTATGATTTTGGTGATAAT 3952 46 100.0 30 .............................................. ATAGAAGATCAGCAAGAACTAGATAGTTTA 4028 46 100.0 30 .............................................. TTTAACGTTATGGTGCATTAGCAAAAAATA 4104 46 100.0 30 .............................................. TATCTGTTTGTTTGGTATCATTGCGGGTGC 4180 46 100.0 30 .............................................. GTTTATAAATGGAATGTATTTTAAAGTTCC 4256 46 100.0 30 .............................................. TGTACAATTGTTCATTTTTTGGTCTAGCAA 4332 46 100.0 30 .............................................. AAATATGCTTTCGTTTATGCCGACTAAAGC 4408 46 100.0 30 .............................................. TTACATACATAATCAATGGATATGGTTGTT 4484 46 100.0 30 .............................................. CCTGAATAGATTCTTTTCCGTATTGTTTTT 4560 46 100.0 30 .............................................. TCAAAGAATATAAAGACGCTAAAGATGCTG 4636 46 100.0 30 .............................................. TCACGATGTATTTAGAAAATATGGTTATCC 4712 46 100.0 30 .............................................. TGCTTGTAGTAGCTGTTAGTGGCATACCAC 4788 46 100.0 30 .............................................. CGCAAAAATATTATTACTAGGAGCAATCCT 4864 46 100.0 0 .............................................. | ========== ====== ====== ====== ============================================== =============================== ================== 64 46 99.5 30 GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC # Left flank : CGGCATACGAGATAATGAGCGGTGACTGGAGTTCAGACGTGTGCTCTTCCGATCTCACTTTGCGGGATAGTGTCATCAAAT # Right flank : CATACCGCGAGTTAATCGTTTGATATGTTGGTGGTTATATGCTTATTTTGAAATTAAAAAACAGTTCTGTTTGTGTGTTGATATTCTGGTAGGTCTAATATTTCTAAATCCTATTTTTCAAAAAAGTTCTAATTGTTGCGAAGGTTTGTCTGTTTCTACAGGTTTTTTTCCATAAAAAAGCTCCATCATACCAAATTGTTTATCGGTTATTTGCATCACACCAATTTTGCCATGTTCGGGCAAACTATTTCTTATTCTTTTGGTGTGTACTTCGGCATTTTCTCTGCTGGCACAAAACCGCATATAGATCGAAAATTGAAACATAGAAAAACCATCGTCCAATAATTTCTTGCGAAATTCACTGGCAATTTTACGCTCTTTCCGCGTTTCGGTGGGCAGGTCAAAAAATACTAATATCCACAAACTTCTATACTGGTTTAAACGGGTGTAATGTTCGTCATACATAAATAGGGTATAAAATTTTTCTTGCGGCTCCCGCA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.91%AT] # Reference repeat match prediction: F [matched GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.00,-0.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [14-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [50.0-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.68 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //