Array 1 76427-71361 **** Predicted by CRISPRDetect 2.4 *** >NZ_AENP01000006.1 Peptoniphilus harei ACS-146-V-Sch2b contig00002, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ============================================ ================== 76426 33 100.0 34 ................................. AAAATTTTTTTGCCTAAATAAAAAAAACAGCGAC 76359 33 100.0 34 ................................. GTCCACCTCAATCTATCTTTTTCAACATTTTGAG 76292 33 100.0 32 ................................. AGAAGCTAGAGATGTAAATACTAAATTATCAG 76227 33 100.0 34 ................................. ATCATCTTAGGTGTTTGAGTTAGATACATACCAG 76160 33 100.0 34 ................................. GTAATATCATTATTTATTAAAGTTAGGGGATCTA 76093 33 100.0 34 ................................. CATCATATCCGATAAGCACACCTTTGCAAACAAC 76026 33 97.0 33 ................................T TTGAAATGCTAATCTACTTTTTACCTTGGTATG 75960 33 97.0 34 ................................T CTGATGAATACTTGAAACCAATAGAAGAAAAGCG 75893 33 100.0 35 ................................. TTTGAGCTTTTAATTTATCTAATTGTTTAGAAAGT 75825 33 97.0 34 ................................T TTCTTAGTTCCTATTAAATCATCTGTTATTCCCT 75758 33 97.0 34 ................................T TACCTCAATATAAAGTAGAAGAAGTGAAGACAGA 75691 33 100.0 35 ................................. TATATACAGCTAACACCCATGTTGGATAATTTAAA 75623 33 97.0 36 ................................T CTTTTTATCTATCTTATTAACTATGCAAGGTAGGTC 75554 33 97.0 35 ................................C TTTTGTTGACAGTGAGGACAAAGACCATCAAACTT 75486 33 100.0 34 ................................. CTAATTTCTCTGTCAAAAATATATATATCTTTGC 75419 33 97.0 32 ................................T TTACTAGATACTTCGTTGTTTGCTACTGTGTT 75354 33 100.0 33 ................................. TTCCAATACAATACAGCTAAAGAACAAATACGA 75288 33 97.0 34 ................................T CATGAACTGAAAATCGGAGAAAAATACACATCTA 75221 33 97.0 35 ................................T CATTGTTTTGGCTCCTCTTATACATACAACAACTA 75153 33 97.0 33 ................................C CAATTAAAGAAATGTGACTTTATGTATGTGCTG 75087 33 100.0 34 ................................. ATAAAACCCCATCTGGTATGGAAGACTATATGGG 75020 33 97.0 34 ................................T CTCAATGGGTGCCAGAGGGATTTGGGACTTGCGA 74953 33 100.0 34 ................................. TGAGAGATGGCGACCCAAGAATGTATCAAATCCC 74886 33 100.0 34 ................................. TGAGAGATGGCGACCCAAGAATGTATCAAATCCC 74819 33 97.0 35 ................................T GATGTTGGCTTCATTTCCTCCGCCTCTGGCATCTA 74751 33 97.0 33 ................................T TTTTTCTGCTTGTCGTTGGCAAAGTCTGCCACT 74685 33 97.0 33 ................................T TGTCTAAAGTCCATGTTGCCCCCACATATAGGG 74619 33 97.0 34 .G............................... TATTGATTTTTTGCAAATACCCACTTGTTGGGAG 74552 33 97.0 34 ................................T CAATCTCATTTTGCCAAGTCGCCTCTGCTACCTT 74485 33 97.0 34 ................................C ACATTTATAGGTAGTAATTGTTCTTCATATGTAA 74418 33 97.0 32 .......T......................... TCTACCCCTAATATAACTATCCCACCATGGGT 74353 33 97.0 35 ................................T AGGCCATAAAGCAAATACACCTCATGCCCTAATTC 74285 33 97.0 33 ................................C ATTTATTACACCTCTTACATACCTATTTGGGAT 74219 33 100.0 33 ................................. CGCAATGTATCTTGGTTACCCTGCAGGTCTTGC 74153 33 100.0 37 ................................. TATAGTAATCACTCTCAAATCCTGCACCCTTTAAAAT 74083 33 97.0 34 ................................C TTTCCAAGACCCATGATATTTACAGAGAGGCTTA 74016 33 100.0 34 ................................. ACGCTTTCAGCCTTTGCTTGTGCAGGTCCTTGGG 73949 33 97.0 34 ................................T CATTGGCATAGGCCCTCTTAATAAAGAAGTCTTT 73882 33 100.0 34 ................................. GAAAAAATGGAATTATGACGAGGAAGTCCTTTTA 73815 33 97.0 34 ................................T ACCACCATTGACCTTAGTAGGCTTACATGGTAGA 73748 33 97.0 34 ................................T ATTTTTAAACGGGAGCTTATATTTGCCTTTCCCG 73681 33 100.0 35 ................................. ATTCATAGCCCTTGTCAAACCATTTAAGCCTTTTC 73613 33 97.0 34 ................................T TGCTGACTATCCGCTATGTTTTTTAAAACTTTAT 73546 33 100.0 31 ................................. AGAGAAGAAATTCATTATGAGACTGTAACTA 73482 33 97.0 35 ...................T............. TCATTGATATTTGCCACCATGGATATATTAAAAAT 73414 33 97.0 35 ................................T CTTATGACATACTTTCAGCGGCGGCAATTGTTTTT 73346 33 100.0 35 ................................. AACAAGCAGGGGCAAATATCCCAGGTAGAATTACA 73278 33 97.0 34 ................................C CATCTAGTGGGAATGCCAAAAAGCTTTATGTTGA 73211 33 100.0 33 ................................. AAAGTATTGCCACGAATGTGGTCAAAGATTGGA 73145 32 97.0 34 ......-.......................... CAGTTGCAGTCGACAGAAAGCTAAGTAAAGACAA 73079 33 100.0 35 ................................. TGTGAGGAATACACAAAGGCCTATGTGGACCTTGT 73011 33 97.0 35 ................................C TGAAGAATATAGAAAATACGCAGTCGAGGTGACAA 72943 33 97.0 35 ................................T CTCAATGTCATCATCATAGCATGGGATTGTCACAG 72875 33 97.0 35 ................................T AAATGCACCAACTACACCATTCCAAGCACTAGACC 72807 33 100.0 32 ................................. AACAGCAACTGGTTATGTTGATAAATTATCCC 72742 33 97.0 37 ................................C TCTTGGTTTATCATAAATAATTTCATAGTAAGATCTA 72672 33 100.0 36 ................................. AGGCTTGCGATTTTATCAATATCTAGAGTTAAATAT 72603 33 97.0 44 ................................T TTAGCAGGCATCAAAATATTTCCAGCAAATGTATCTGCTTGCCT 72526 33 93.9 34 .........T......................T TATCATCCTCATTATCATTGTTTGCTATCTTGTG 72459 33 97.0 33 .........T....................... ATCTGTGGTCAACACAACAGAGTCAACTGGCGG 72393 33 97.0 33 .........T....................... TATTCAAATAATGCCCTAATCTGTCTATCAATC 72327 33 93.9 33 .........T......................C CATCATTAAGCTTTTTAAGTTCCTTTAAAATTG 72261 33 93.9 34 .........T......................T TCTTAGGTGAGGTTCAAAATAATACAGATGGAAG 72194 33 93.9 33 .........T......................T TTAAGTCCTCGATGCCATTTTCTTTTTGTAACG 72128 33 93.9 35 .........T......................T TTCCTATACCTTCCCCAACTGTGCAATGTCATCTT 72060 33 90.9 34 .........T...........A..........C TGATGAGGTCATCAAGGCTATGGCAGATGATGAG 71993 33 87.9 33 .......T.....T.A................C ATTTTATTCTTGTCCTTAATTCTGGGTGTATTT 71927 33 87.9 34 .......T.....T.A................T TAAAAATGATGTAAGAGTACTCTTTTTTGTTTAA 71860 33 90.9 34 .......T.....T.A................. GGTTATAGGGGAGAAGTTCACGTGATTTTGCATA 71793 33 90.9 34 .......T.....T.A................. ACTTCTGGAGATGATGACGACAAGAAGAAGGTAA 71726 33 84.8 33 .......T.....T.A.....C..........G TGACTCGTAGAATTAGAACACTTGACTAATTGC 71660 33 84.8 33 A......T.....T.A................T ACCACAAAGTCTTTGTCCTCTAAAAAGTCTTTA 71594 33 87.9 33 .......T.....T.A................C CCTTTCCAAAGGTCTCTAGGTCTTAAAATATCG 71528 33 90.9 35 .......T.....T.A................. ATACCACCAAATTGGCAACTTGGGGATTTACACTG 71460 33 97.0 34 ................................T TTCTTTAGATCTCTGGATAGCTCAGGCGAAATTG 71393 33 90.9 0 .........T..A...................T | ========== ====== ====== ====== ================================= ============================================ ================== 76 33 96.7 34 GTCGCACCCCTCGCGGGTGCGTGGATTGAAATA # Left flank : TTTTTTTAGATACTCATTAAAATTATTATAAGCA # Right flank : ATTAATATAAGGAAGGGTGAGTAAAGGTTGGAAAAAAACTTAAAGGAAAAATTGTTATTTTTAAAAGCAAATTGTAAGCCTTATGAAATTAATGAGTATTTTGCTGTTGAATTTGCGGATGATTATGATGTATTTGCTCAAGATAAAAATAATATTGAGACTTTAGAATATCTAAACGATGAATTTATTGACATTGATGTTGATTATAGTCATAGTAGTGCATTTGATAGTAAGGTAAGAGAGACAATTGATGAAGCTATTAATATGTTAAGTTAATCTCATTACGGGTCGATGGATTGAAAATTATTACTCGCCCAACGAGTGAAAAAAATTTAGCCGCAATCTCCATGGGTGTAAGGACGAAAATTGAAATGTAAGGTTATTATTATGAAAGTGAAATTTATTGGCGAAACTTATCCTGTCTATATGATTAATGGGAAGGTCTATGATGTTATTAGTATTGAAAAGACTTGGTACAGGATTGTTGATGAAGAAGGGGA # Questionable array : NO Score: 5.50 # Score Detail : 1:0, 2:3, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.40, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCCCTCGCGGGTGCGTGGATTGAAATA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [7,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACCCCTCGCGGGTGCGTGGATTGAAATA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.00,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [12-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [1.01,9.41 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //