Array 1 95558-94990 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABGVQ010000003.1 Klebsiella michiganensis strain 4928STDY7071130, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 95557 28 100.0 32 ............................ AATAATCCGCAACCTGGCGCATGGGAGGATAT 95497 28 100.0 32 ............................ TAGGCGTGATCACAGCCTCGGAAGTTCACAAC 95437 28 100.0 32 ............................ TTAATCGACTCAGCTTTCCAGCGGTTAGGATT 95377 28 100.0 32 ............................ AAAATGGCCGGAGGCGATCCGCTGCAGGGCTT 95317 28 100.0 32 ............................ GAGCTAAGGAGGCCGAAAAATGAGTAAGTCAT 95257 28 100.0 32 ............................ TCGCGGCGAACGGCTCTCAAGCGGGTGAAGGA 95197 28 100.0 32 ............................ CACATATCGCCGAGAGAAAAGTCGATACGCTC 95137 28 100.0 32 ............................ TATATCCCGATCCGGGGCGGATATTCGGAACC 95077 28 100.0 32 ............................ CTGGACAGCCAATGCGACAGGTTATGGCTTTA 95017 28 78.6 0 C...........A...........TGGT | ========== ====== ====== ====== ============================ ================================ ================== 10 28 97.9 32 GTTCACTGCCGTGCAGGCAGCTTAGAAA # Left flank : ATCAAAGGATGGCGTTGCGTCAGCCGGGTGCAGGTGAAAAGCAGCCCCGAGCGGCTGATGCGCCGTTCGGTGAAAAAAGGCTGGATAACGCAGGATGAAGCAGATGCGCGATTGCTTACCATGCGGGGCGAGTCGACAACACTCCCCTGGCTGAATATGAAAAGCCTTTCAAATGGACAGATATTTCCGCTATTTATTTGTCACGGCGAGTTGCGGGCGCAGCGCGTCGCGGGAACATTCAGTAGCTATGGGCTGAGCCATATCGCGACTGTCCCTTGGTTTTAGCATTTCGGTGAGAACTTTCTTGTTGAATGTTAAAACGAACCAGAACCGGCGCTGTATTTTGCGCCGGTTATTCGATCGCTACAGAAACCCTTTCTTATGATGAGCCTCTATCTTGTTGATTTTACAAGCTAGTTATATAAGGGGCGGAAAAAGGGGGTTGATGAGATTGAGGTTTTTTTGATTTTAAATCAAACTTTTACGTTGTTTTGGTTTCA # Right flank : GGATTAAGCATATGGTTATAGAAAGATAATTCGAAGCTTGCTCTCACAGAGAGCTACGGTCATGAATAGCGTGAGTTTATAACTAAATAATGGTATCAGGCAGGAATATAAAATGAAAAGACCGGGAATTATCCCGGCCTTCAGCATCTGGCGCGCTAAGCGCGAAAACGATCAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGCTCAACAGTCACTTTGTCGCCCGTCAGAATGCGGATGTAGTTTTTACGCATTTTACCGGAAATATGCGCAGTTACCACGTGACCGTTTTCCAGTTCTACGCGGAACATAGTGTTAGGCAGCGTATCAAGTACGGTGCCCTGCATTTCAATATTGTCTTCTTTGGCCATCTAGTCCTCTGGGGTATCACTACCGTAGTTTTGAACCGGCAAGATAATGCCGAAGTTCAGCAAGTATGTAAAGTTTTACGTCAAATCGCCGAAGTAGTTTTGGCGCATTA # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTGCAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTGCAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [60.0-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 104672-103984 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABGVQ010000003.1 Klebsiella michiganensis strain 4928STDY7071130, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 104671 28 100.0 32 ............................ TGTAGTGTTGTTCTAAGTTCATGCCCCAATTT 104611 28 100.0 32 ............................ TGGCGGGTACGTTCGTCGTCCTCGCGGCGATT 104551 28 100.0 32 ............................ TTGGGGCGCGGTATGGCTTCGGTGAATGGGCA 104491 28 100.0 32 ............................ ACAGGGAGAGCCTCTCCCGCGTGGTTTTTATG 104431 28 100.0 32 ............................ AGAAACAGGCGCGGAAAATCCCTGCAAAGGGT 104371 28 100.0 32 ............................ CATGACCCACGCAGGGCAGAACGTCGTATAGA 104311 28 100.0 32 ............................ GTAAAAAACTCCCTACTGTGCTTTACCGGCAG 104251 28 100.0 32 ............................ AGGTGACCGAAAGGTACTTATCAGGTTCAAAC 104191 28 100.0 32 ............................ AGGTGACCGAAAGGTACTTATCAGGTTCAAAC 104131 28 100.0 32 ............................ TGAGAGTTCGCGCCAATATTGCACGCAGCCGT 104071 28 100.0 32 ............................ GTACTGACCGGGGAGAGGACCACTCGTTTTAC 104011 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 12 28 100.0 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : CGGTTATCCATCAGGTGGTGGATAAATTTATCGTCGAGCTGCAGGTTCAGCTGGATCAGAAAGGCGTCTCTTTGGAAGTCAGCCAGGAAGCCCGCGATTGGCTGGCCGAGAAAGGCTACGACCGGGCCATGGGCGCGCGTCCGATGGCGCGGGTGATTCAGGACAACCTGAAAAAACCGCTGGCCAACGAGCTGCTGTTTGGCTCACTGGTTGACGGCGGACAGGTGACCGTTGAACTGGATAAAGAGAAAAATGCGCTGACCTACGACTTCCAGAGTGCGCAGAAGCACAAACCGGAAGCGGCGCATTAAGTTTCGGTACTCAGTGACAAAACCGGCCTCAGGGCCGGTTTTTTTATGCCTATGTCCTGGACCCTTTTTTATTCCACTTTTTAACTTGTTGATTTTAATAAAGAGAAAATATAGCGTAAAATTATGGTGGCAGAGAGGATGTGTTGATTAATTTCAATGATAACAATATGGTAGGGTGTTGTTCGTTCA # Right flank : AGAGCTTGCCCACACTGCTGTGCAAGCCAAACGAGTCTAAAGAAATTGCCAAAGTAATAGGTTATTTTGCAAGTTGCGATGAATGTCACCGTATTGCATCTAATATACTGTTTTTATAAACAGCTATCGACTTTGAGCCACAGGATGTGACTATGCCCGCGAAGTATATTGCCCCCTCGGATTTAAAAACGATACTCCATTCAAAACGCGCCAACATTTACTATCTGGAAAAGTGTCGTGTGCAGGTTAATGGGGGGAGAGTGGAGTATGTTACCAGTGAGGGGCATGAGTCATTCTACTGGAATATCCCAATAGCAAATACAACGGCCATTATGCTAGGAATGGGAACCTCTGTTAGCCAGGCAGCGATGCGTGAGTTCGCCCGCGCGGGTGTGATGGTAGGTTTTTGTGGTACGGATGGCACACCTTTATATGCCGCCAATGAAGTCGATATCGACGTTTCCTGGCTATCGCCACAAAGTGAATATCGACCAACGGAG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [55.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.24 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //