Array 1 6325-5123 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAINFC010000120.1 Streptomyces sp. UNOC14_S4 contig_120, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ============================================ ================== 6324 29 100.0 32 ............................. TCGCGGTCCCTGGTCGCGAAATCCCTGGAATC 6263 29 100.0 32 ............................. GGGCCAAGCGCTGGCGCATCTGGCGCCCCACC 6202 29 100.0 32 ............................. TTGGAGACGTCCCGGTATACCGAACGCGAGGT 6141 29 100.0 32 ............................. TCGCCCTGGGTGACTCGTACTTTGACACCGTC 6080 29 100.0 32 ............................. GATCTCCCGGCGGATCTGCACTTTGCGGGTCG 6019 29 100.0 32 ............................. CCGCGGCCGCAGCTTTCGCCGCCTACGACGCC 5958 29 100.0 32 ............................. GCGACCTGCGTGCTCCGCGGCATCGAGATGCA 5897 29 96.6 32 ............................A GGCCGAGGGCTCCCAGGACCGGTACGGAAGGA 5836 29 100.0 32 ............................. ATTCCTTCGCAGGGATCTCTTTTATTTACATG 5775 29 100.0 32 ............................. AAGGCTTTCCTGCCCTCGGACATGATCGAGCC 5714 29 96.6 32 ............................C CCTCCGCTCGCCCGCGCCCGGCGCCCCGACGC G [5697] 5652 29 100.0 32 ............................. CTTCCCGCCGACCTGTGCAAGGGCTACGGCCC 5591 29 100.0 32 ............................. GTGAGGTTGTCCAGCAGCCACGAGGACTTGCG 5530 29 100.0 33 ............................. GAGGACACAAAGCAGTGATGGGAAGGATCAAGG 5468 29 89.7 32 TG.T......................... GCCCTGCCCGCCAAGGGCGCCCGCGTCGCCCT 5407 29 100.0 32 ............................. TTCTGGAACCGGTGGCCGACCGACCACCGCGC 5346 29 100.0 32 ............................. CCGATCACCATGACGTGCTGACGGTCCGTGTC 5285 29 100.0 32 ............................. GCCACCGCCGGCGCCGGTCCCCACACGCCGGT 5224 29 96.6 44 .C........................... GCACCAACGGCCCGCACGCTGAGGAAGGCGGCGCGGCCTTCCAG G [5202] 5150 28 72.4 0 ..C........T..A..A...CC.A-... | ========== ====== ====== ====== ============================= ============================================ ================== 20 29 97.6 33 GTGGTCCCCGCGCAGGCGGGGGTGTTCCG # Left flank : CTTCTTCAGAATCATGTCCTGGAACTGGGGCATGATCTTCCCCAGATCGTGCAGGCCCGCCCAGAACATCACCGTGGCCCGAGCGTCCGCCGCGCTCAAACCCAGCGCGTTGGCGATGATTTCCCTCCGAGCTGCGCCCAGCACTCGGTCCCACACCGCCCCGCAGACCCAAGCCGTGTCAATCAGGTGACTGATGACTGGATAAGGCTCGTCTAACCCCTCGGACTTGCCTCGAACCCGCGGATCGACCACAACAACCTCCCCGGCTGGACTCTGTCCGGCAAAGTCCACCACACGCCACTGACAACGCCCCGTGAGGGAAGCGGCTCAACATCACGATCAGGCCCACCCAGTCCTGAGAGTCGAGGCACCCGAGGCGCCGCTGCAGCACAGCTGCTGTCACTTCGGCCTGAGCTATCTGCAACTATGAAGCCACGCTGGACAGCCACACCGCAGGCAAAGAAAACGCAAAGGGCTCCTGAAAGCGCAGCTCAGGAAGT # Right flank : GCCAGTGCGGCAGAGCCCCCAAAGCAAGGCCCCTGCCAGCCCCGCTCCCGATCCAGCACCTAGCATGCTGAATCATGGAACTCAGACACCTCGAGCACTTCGTGGCCGTCGCCGAGGAGCAGCACTTCACTCACGCCGCCGAGCGTCTCCGCGTCGCCCAGTCCGGGGTGTCCGCGTCCGTGCGGTCCCTGGAGCGGGAGTTGGGGGCGGAGTTGTTCATCCGTACCACTCGGCGCGTGGGGCTCACCGACGCCGGGCGGGCGCTGCTCGTCGAGGCTCGGCGGACGCTGGCGTGCGCTGCCGCGGCCCGGGAGGCGGTTGCCGCCGTGCAAGGGCTGATGGGCGGCACGCTTTCGGTCGGCACGGAGCAGTGCATGGGTACCGTCGACGCCGGTGCGCTGCTCGCCTCGTTCCATGCGCTGCATCCGCAGGTGGAGGTGCATATGGAGCAGGCCGGTTCCGGGCGGCTGCTGGAGCAGGTGCGGCGGGGGGAGCTCGAT # Questionable array : NO Score: 6.14 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCAGGCGGGGGTGTTCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCAGGCGGGGGTGTTCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-11.90,-13.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [13-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [26.7-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 459-65 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAINFC010000939.1 Streptomyces sp. UNOC14_S4 contig_939, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 458 30 100.0 31 .............................. GCAGCGGTGGGTGTGGGCGGCCATGGCACCG 397 30 96.7 31 .............................A TCATCCTTCGGTACGCGGAGCTGCACGACCG 336 30 86.7 31 ..........T.T...............GG GCATCCTTCAGTTCGGCGACGAGGAATGGAC 275 30 93.3 31 ............T...............G. AGATCCCGTGCCGGAAGTGGGTCGAGGCCAA 214 30 90.0 31 .........................C..GG ACGCGTTCCCGGAGGTCCGGCGCACGCTGCA 153 28 90.0 31 ............--..............G. AGCGCGCCGAGCGTACCGCCTGCAAAGGCAT 94 30 80.0 0 A..........G.A..........CC..G. | ========== ====== ====== ====== ============================== =============================== ================== 7 30 91.0 31 GTGGTCCCCGCACGCGCGGGGGTGGTCCCC # Left flank : CGGTCGAGCAGTTCACAGCGGCTGTGGGCGAGACGTTCGTCTCGTCCGCTGCCGTGTCGGACCGATGCGACTCGATCGCGTGGAAGGCCGTCACTTCCGCCGGTACGTACGTGGTGAAGGCGAACACGGAGGGCGGAGACGGCAGCGGCATGTGGCTTGCCCTCGCGCAGGCACGTGACGGCGATACTCCGGCCGTCAGAAGGCTCCTGGCCGGTGTGACGAGCAGCCTGGCCGACGCCCCGTCCGCGCGGCCGACGGTGGCCGAACTCGCCAGTGCTCTTTAGCAGGGTCTGTGTCGCGTAGTCGCTTTTGATGGGCGCAGCCGGATTCCAACTGCCCTTGCCCGCTGCGGAGGCCGATCAGGTACCCGGCTTTCACCTGGAGCCTGGCTTGCTGGTCCGCTGGATCGATAGGCTGGCGTGAAGCTAGGTGCTTTGCCTGAGTAGCGGGAAGTGAGTAAAAACGAGGCGCGGCCGGGATGAACGCGCTGGTCAGGAAGT # Right flank : CGACGTGCACCCGCCAGACGACTCACCACGAGAACCGGGGGCCGAGGGAGAGAGCTCCCCCGCCC # Questionable array : NO Score: 3.65 # Score Detail : 1:0, 2:3, 3:0, 4:0.55, 5:-1.5, 6:0.25, 7:0.01, 8:1, 9:0.34, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCACGCGCGGGGGTGGTCCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCACGCGGGGGTGGTCCCC with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [14-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [28.3-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 2684-2533 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAINFC010000146.1 Streptomyces sp. UNOC14_S4 contig_146, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 2683 29 96.6 32 ............................C TTGTCGGTCACGGAAATTCCGATTCCTTGAGG 2622 29 100.0 32 ............................. CGGAGAAAGCCCGCGCTCACCAGCGCGCGCTG 2561 29 82.8 0 .....................A.A.C.TT | ========== ====== ====== ====== ============================= ================================ ================== 3 29 93.1 32 GTGGTCCCCGCGTACGCGGGGGTGGTCCG # Left flank : AACACCCTGGTCATGACCGTCCTCGACCGCCGCCGCGAGGTCGCCCTGCTGCGCCTGTCCGGCACCACGCGCCGCCAGGTACGCGACATGATGCGCTGGGAGGCCCTGCTCGTCGCCGCCACCGGGCTCCTCGTGGGCGGCGCCATCGCCTGGACGACGCTGGTACCGATCACCCGCGGCGTCACGGGATCCGACCCGTACGTCCCGCCCGGCACGGCCCTCCCGCTCGCGGCCGCGACCGTCCTGCTTGCGCTGGTGGCGACGGGCCTCCCGACCAGGGTTCTTCTGCGGCGGGGGCCGCTGGCGGCGGGGGCGGAACGGCAGTGATCGCGGTGCTCGCAGCGATCCGTGTTGCCCCATGGATCGACGGGCTGGCGTGAAGCCGGATGGCGCTGGTGAGTGGCTTAGGCGCTGTTCGCATCCAGAGGTCTGCTTTGCCCGAGCCTCGGAAAGTGAGTAAAAACGAGGCGGGGCCGGGATAATGGCGCTGGTCAGAAAGT # Right flank : CCACCCCCACCGGCCGGACACTGGGACGGACACCAAGGTGCGAAGTACCCCGCCACCTTCAGCCCAGGGCGCCGAGCACGGCTTCCGTGTCGGTCAGGTTGAGCAACACCACGTCGGCGCCTGCCGCTGTCAGCTCGGCGGGGGTGCTGCGGCCCGTCGCCACCGCCACTACGCGCACGCCGTGGGTCAGCCCCGCCTCCACCCCTGCGGGCGTGTCGTCCACCAGGACCGCGTCCGACGGCGGGCGTCCGGCACGCTTCAGGGCGATCCGTACCAGCTCGGCGCGCTCGTCGGCGTCCTCCCCGTAGGCCCCCAGCTCCCACTGGATGTGCCGGTCGAGGCCGAAAGTCGCGAGCTTGATCTCCGCCACGGGCCGGATGTTGCCGCTGACCACGGTCTGCTCGATGTCCCGGACAGCGGCCAGGGCCTCCAGAACCGCGGCCGCTCCCGGCAGCGCGTGCCCCCGCTCCCGCAGTTCGGCCACCCGCTGGTGGTGGACC # Questionable array : NO Score: 3.82 # Score Detail : 1:0, 2:3, 3:0, 4:0.65, 5:-1.5, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGTACGCGGGGGTGGTCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [3,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCACGCGGGGGTGTTCCC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [33.3-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,4.5 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 3741-1699 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAINFC010000166.1 Streptomyces sp. UNOC14_S4 contig_166, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 3740 29 100.0 32 ............................. GTGGCATCAGAGATCGGAAGGCAGCTTCTTTC 3679 29 100.0 32 ............................. GCGGCTAAAAGGCGGCTCGTTGAGCTTCAGCA 3618 29 100.0 32 ............................. CGGCCTCGATGGGCCCGTATCGGTGATCGCCG 3557 29 100.0 32 ............................. GCGAACGCCGGGGTCGGGGGAGCCTTGTTGGC 3496 29 100.0 32 ............................. AAAACCTGCCGGAACTTCGGCACCGGCTGACG 3435 29 100.0 32 ............................. GTGGCATCAGAGATCGGAAGGCAGCTTCTTTC 3374 29 100.0 32 ............................. CTCCGCAACGCCGCTCTGGTCGCACTGATTGA 3313 29 96.6 32 ............................T CGGCCTCGGCGCCGGGGCCCTTCTCGATTCGA 3252 29 100.0 32 ............................. TCGAAGGACAGGATCGGCAGGTCCGTCTCGGG 3191 29 100.0 32 ............................. TTTCTCGTCCCGGCGGACCTTTCACCGGCACG 3130 29 100.0 32 ............................. AATCCGGGCAGGTATCCACCCCGGACGCGTAC 3069 29 100.0 32 ............................. CGGACCCCGAGGCCGTCGGCAACGATGTGCTG 3008 29 100.0 32 ............................. GAGCCTCACGAAGGGCGACACACTCGGCACTA 2947 29 100.0 32 ............................. ATGATCCATCGTGCCAGCGCTGCTCTGGTGCA 2886 29 100.0 32 ............................. GCGGAGTGTCCGGGGATGTCGTTGCCGGGAGC 2825 29 100.0 32 ............................. ATCATGCGCAACATCAGGATGTCGGCGCCGAC 2764 29 100.0 32 ............................. ACGGCCCGGTGGTGCGGGTCCTGCATGGTGCC 2703 29 100.0 32 ............................. AATCAGGATCGCCAACGGATTACCCGCATCCG 2642 29 100.0 32 ............................. GATCGATCTGCTTTGACCGTGCTCCTGCGCTC 2581 29 100.0 32 ............................. TTCCACGATCACGTGGTCCTTTTTACTGGTCC 2520 29 100.0 32 ............................. AATTCGGTAATCCGGCCAGGGACGCCTTCAAC 2459 29 100.0 32 ............................. ACCAGGTCTCCGAGTTGCATTGCCTCGCGCTT 2398 29 100.0 32 ............................. GCACAGCGGCTTTACCTGTTCCTCGTCTGCCA 2337 29 100.0 32 ............................. GCCCTCATCGCCCTGGTGTGCTCGCCGAGAGC 2276 29 100.0 32 ............................. GGCAGCCGTCTCGGAGAGTGCTTCGGGCTGGA 2215 29 100.0 32 ............................. CGGGGCTCCGGCGGTACCGTCGGGGCCCCGCC 2154 29 100.0 32 ............................. AACTCTGGCGCCGTCTACGTCGACCCTGCGGG 2093 29 100.0 32 ............................. CGGCCGGGGGCGGTCGTGACGAGGTGCCGCGG 2032 29 100.0 32 ............................. GTCCGCATTCGACAGCGGGGGCTTGAGGACTC 1971 29 100.0 32 ............................. ACGCGCGGCACGGGCGGTGCGGGGCCTCGCCG 1910 29 100.0 32 ............................. TTGGACGAGCCCCCGTTCAGCCGCCTTTTCGA 1849 29 100.0 32 ............................. ACCTTCGGTGTGATGGGGAACGCCCGTGGCTC 1788 29 96.6 32 ...T......................... ACCACCTCGCGCGCGATCCCCGCGATCCTCGA 1727 29 89.7 0 ...T..........A..........C... | ========== ====== ====== ====== ============================= ================================ ================== 34 29 99.5 32 GTGGTCCCCGCGCAGGCGGGGGTGTTCCG # Left flank : GAAGTGTTGGTGAGGCTCTTGTGAAGACTGCGGCAGAGCTCCTCCCTTGAGCCCCCCGGAACACGAAGCGCTCGCGCCGTCCGGCGCACTCCCGCGTTCCATTCCCACCGGATTCCGACGGCCGTTGCTCACCGTTCCAAGCCTCGGGAAGCCGCCCTACAGTGAGGCCACCGCGATCCGTTGCGCCGCCGCAGCGCCGCTGGGCGCTCTGCGCTGCGCCCGGCGGCTTCGCCACGCTGATGCCCCGACCTGCTGCCTTGGGGCTTACCCGATGACGTCGCCGGGATGAACCCCACGAGCCACAGGGCCACGGAGGAGCAGCTGGTCAGCCCGTGATCGGCTACTTGAAACTCCGAGGCCCTCGCGTCCCATAACACCCGCTACCGCACTAGCGATGATCGCTGCCTCCCGAAACCGTCTGCCACTATGGAGCAATGCTGAACACGCGCCCCATAGGTAAGGGAAAGGCAAAGCCCCCCTGAAGACGCAGCTCAGGAAGG # Right flank : TACCAATGCCACACGCTCGCACCGGGCTCATCGCGGCTCCCGCAAGCGAGGGACGGTCCGACTGCGCTTCCTCTGCTTCCCGGGAATCCGGCAGACGATGCAGGGCAATCACAGTCCGACCGGCAATGACCTGGGCGCTTGTCCCCCGGTCACTGCCGTCTGCGAACGACGTTCCTCAGAGAGATAACCCCGCAGAAGAACCGCCACCGAACAGCCCAACGGCCCTCCACCGGAGGGCCGTTGACCGTTCTCCCGCAGTCGCGCAGGAGTACTGTTCTGAGTGTCTAGGTCAGAACGGAGCTCAGTATGGCGCACATCGCAGACGATCACATCGGCGCCCGGATCGCCGACTACCGCAAACTACGTCAACTGACTCAAACGGGGCTAGCGCAGCGAGCCTACGTCTCCCGTGGAACCATCGCAAAGGTGGAGGCAGGACTCACCCCCGCAACACCAGCCATCGTGGCAGCCGTTGCCCGGGTACTTGAGGTAGACGTGGC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCAGGCGGGGGTGTTCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCAGGCGGGGGTGTTCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-11.90,-13.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [30.0-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 361-27 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAINFC010000186.1 Streptomyces sp. UNOC14_S4 contig_186, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 360 29 100.0 32 ............................. GCGGAGGGGACGGAGCTTTGCCGCTCACGGCG 299 29 100.0 32 ............................. GGAGCGGTTCAGCGCTTCGGCGGTGACCACCT 238 29 100.0 32 ............................. CCGCAGCGCGGCAGCGGCTGCACGGAGTGCGG 177 29 96.6 32 ............................T CGGCGTCGATGTAGGTACCGACGTCGGTTGCC 116 29 100.0 32 ............................. GCTACAGGTCATCCCGTACGAGCAAGGGGAAG 55 29 96.6 0 ........................G.... | ========== ====== ====== ====== ============================= ================================ ================== 6 29 98.9 32 GTCGTCCCCGCGGGCGCGGGGGTGTTCCC # Left flank : CCAGAAGGCAAGGACTTGGAGGAGGACGCAGCCAACCTCCTGTGGGACGAACACGTCGGAGTCGTCCCCGGCGGCACTGACTGGTCCGGCGGAGCCGACCTGTCGGCATACGGCATGACGGACAACCACATTGCCGTTGTCGGACCCGAGATCGAGGGAACAGGTACCGCCCCGTGACGGTCATCATCCTCGTCGCAGCCCCGGAGGGCCTCCGAGGCCACCTCACCCGGTGGATGGTCGAGGCCAGCGTCGGCGTCTTCGTAGGAAACCCCAGCCGACGCGTCCGCGACCGCCTCTGGGACCTGCTCGCCACCCGCATCGGCGACGGCCAGGCCATCCTCGTCGAACCCGCCACCAACGAACAGGGCTGGGCCGTCCGCACCGCGGGCCGGAACCGCTGGCAACCTGTCGACTTCGACGGCTTGATCCTCTCGGCCCGCCCCGGAAACCAACTGAATGAAAACCGTGCCACCATCCGATAAAGCCCCAGCTCAACAAGT # Right flank : CGCTGTACCAAGCGCATGGGGGTGGTG # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTCCCCGCGGGCGCGGGGGTGTTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,0] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGTCCCCGCGCACGCGGGGGTGTTCCC with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [15.0-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 3242-3453 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAINFC010000649.1 Streptomyces sp. UNOC14_S4 contig_649, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 3242 29 100.0 32 ............................. CCGGTCGCGGTCGAGGTGTTGCGGGTGCCGTT 3303 29 100.0 32 ............................. CTGTTGTGGATGACGATGTCGAAGCCGTAGAT 3364 29 96.6 32 ............................C TCGACCCCGTACGGGGGTGGCTCATCCCCGTG 3425 29 96.6 0 ............................T | ========== ====== ====== ====== ============================= ================================ ================== 4 29 98.3 32 GTGGTCCCCGCGGGCGCGGGGGTGTTCCG # Left flank : GGCACTCCCCGTGACTGCTCACCCCGAGGGAAGGGAGATCCTGCCGGACCGGCGCCATTATTTCTGCGAGAACGTTTTCTGCGGATAAGGTGCCGTCGAGGCGCTGGCCTCGGATGGGCGCGTCAGGCACAGGTCGGGGGCTTGGTACGCATTGGGACCAGCGAGCTTCGGCGGGTGCGCGGACGAAGACCTTCTCCCGGATTTCTCCCGGCAGACCTTGAGCAACCCTGCCGGAACGGCGGCAGGCAGATAGTGGCGAGCAGCTCTACCCATGGCTCCCATGCAAGCGCCACCAGACCCGGCCGGGAGCCAGGGGTTACCCCGGTCACCGCCTGAAGCCTGGCCTGCCGGTCAGCTAGATCGATAAGCTGCCGCGGACCCGAGATACCTCGCCGAGAGAGCGACCCGTATGCCGCTTAAACCCGAAGCCCGCTTCACCCGACTCTCTGGAAGTGAATGAAAACGGGGTGCGAACGGGATAAGTGCGCTGGTCAGGAAGT # Right flank : CGCAGCGCTGGAGCATGGCATCGAGTGTCCACGGACGCGGCTGTCGGCGACGGTCGAACTCTGACCCTTTGACGGCGTGTCAATACTGACCCATTTGTGGATCTTCATCTCATTCTGGCCTTGCTGATCAAGGTCAGGAGGAAAGGGTGATCCTCGTGGAAGACTGG # Questionable array : NO Score: 5.77 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGGGCGCGGGGGTGTTCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [0,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCGTGCGGGGGTGTTCCC with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [46.7-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //