Array 1 188012-184084 **** Predicted by CRISPRDetect 2.4 *** >NZ_UJXU01000004.1 Klebsiella pneumoniae strain EuSCAPE_TR266, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 188011 29 100.0 30 ............................. CTCACGCTGATACCTCGGAAAAAGACGGGC 187952 29 96.6 32 .G........................... GCGGGCTGGGTTTTGTCGACTCTGCCGATCCG 187891 29 100.0 32 ............................. TAATATTGATAAATTCGATGAAGTAACCGGAA 187830 29 96.6 32 ............................A TCGAAGTACCAGCGCCGCACCGTGTTTTTTGC 187769 29 100.0 32 ............................. GTGGCCGGTGCTGCCAGTACGGTTACCGAAGT 187708 29 100.0 32 ............................. CATCCACGCTTCTGGCCACCAGGCAGATAATC 187647 29 100.0 32 ............................. GTGCTCCTCTTCCAGATACTGGGCCAGGAGCT 187586 29 100.0 32 ............................. TACAGGACGACAGCATCCTGGAACATTTCGAC 187525 29 100.0 32 ............................. CTCTGCGTGTGCGCCTCCGCTACGAGGTGACG 187464 29 100.0 32 ............................. TGAATATTCATTTACTAAATTAGAGACAATTC 187403 29 100.0 32 ............................. CGGATTAAACGTAAGGCCGCGCGCTGGCGTAA 187342 29 100.0 32 ............................. GTGGTTTGTTACCGTGTTGTGTGGCAAAAAGC 187281 29 96.6 32 A............................ GAACGGAGGAATATAAGAACAAAAGCCCGCAG 187220 29 100.0 32 ............................. TAAACCGCTGGCGTGGTCAGTTGCGTGGCGGT 187159 29 100.0 32 ............................. GGCGCCGGCCTGATCACTATCGGGTAACGGTG 187098 29 100.0 32 ............................. GGCCTGAACCAGAGCATGATCTACACCTGGAA 187037 29 100.0 32 ............................. ATTGGGTAGAGCAGGCGAACGGATGTCTTTTT 186976 29 100.0 32 ............................. TTTTCACGGTCGAAGTTGTGCATGCTTTCTGC 186915 29 100.0 32 ............................. TCGACGCCCCGGTGTGGGAAGACTTTGGCACC 186854 29 100.0 32 ............................. CAGCGCATACGGGTTAAACCGGATCACCTCTT 186793 29 100.0 32 ............................. ACATAGCGCCCGATACGCAGCGCCAGCGGGTA 186732 29 100.0 32 ............................. GATCGATCGTTATTGTTGAACCGCACTATGGT 186671 29 100.0 32 ............................. CTTTTAATAATATCATCGGCAATGTCCTTATC 186610 29 100.0 32 ............................. CGGGACCGGATCCGCGTGGGCGACCAGGATTA 186549 29 100.0 32 ............................. CACCGATATTCAGTGCGCCAACGCCATAGCAA 186488 29 100.0 32 ............................. CCGAGGTTTTTCATACCTTCGGCAGTCGTAGA 186427 29 100.0 32 ............................. CGGAAATTTTGATTAGTTGAATCTGTGCCATT 186366 29 100.0 32 ............................. CCGACTTGGGACGAGGATCCGGCGGAATGTCG 186305 29 100.0 32 ............................. TAATGGCAAAACCATGACCTGATCCGGGCGTC 186244 29 100.0 32 ............................. CCTGAATCTTCACTTCGTCGATCATTCTGCGC 186183 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 186122 29 100.0 32 ............................. GTAACGCAGACGGCGAACGTCGGATCCATTGG 186061 29 100.0 32 ............................. GACCAGAAAGCCTGGGCATTGTTCCGCTCATT 186000 29 100.0 32 ............................. CCCCCGGCCGCGTGGCCGATTGCCATTACCGC 185939 29 100.0 32 ............................. TATACAGTATTATCATAGCGAATTCCCATCGG 185878 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 185817 29 100.0 32 ............................. GCACCAACGTTTACGGTGCGGTGGTGAAACAA 185756 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 185695 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 185634 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 185573 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 185512 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 185451 29 100.0 32 ............................. TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 185390 29 96.6 32 ........T.................... ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 185329 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 185268 29 100.0 32 ............................. CTGCAGGTAAATGACTGGATGGGGGAAGAGGT 185207 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 185146 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 185085 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 185024 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 184963 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 184902 29 100.0 32 ............................. TCCCCTACCACCCACTGAGCAAACTGGTAGCA 184841 29 100.0 32 ............................. CAGATACCAACGGTTACTACGGCAATCAGCAC 184780 29 100.0 32 ............................. AAGGTTGACCTGTTGTCGGCAACCATCGAGCC 184719 29 96.6 32 .........A................... GAGGCGCGCGTTGTCGTCGGTGAGATGCGCGA 184658 29 96.6 32 .....A....................... GCCATTCGTGCTTCTTCGCTTTGCTGCATCCA 184597 29 100.0 32 ............................. GAATATAAAACCAGATTCCATATAGCCCTGTG 184536 29 100.0 32 ............................. CCGGTTACGGGGATGACTGCAATTCGCTCCTG 184475 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 184414 29 100.0 32 ............................. GCGGCGTCAGGTGTGTGGCAGAAAATTATTGC 184353 29 100.0 32 ............................. TCGTCTGAGTTCCGGCTTACGCCGTGCCGACA 184292 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 184231 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 184170 29 96.6 29 ............T................ GGGTTCACTTGGGTGAAACTGAACTAACT 184112 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 65 29 99.3 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : AGGTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTA # Right flank : GTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGATTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [11-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //