Array 1 12236-10953 **** Predicted by CRISPRDetect 2.4 *** >NZ_QJOL01000019.1 Lactobacillus helveticus strain FAM1182 FAM1182_scf0019, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 12235 30 100.0 36 .............................. ATACCACGGATGGAACCTGTATATGCGGGAACAATT 12169 30 100.0 36 .............................. TTTTAAAACGGTGCTACAAAATATTTTTGAGGAGAT 12103 30 100.0 35 .............................. TTCTTAACCTTTCATTTTCACTTTCCAACTGATCA 12038 30 100.0 36 .............................. TGCTTGAATAGTATTATCAATTAATGCATCAGCACT 11972 30 100.0 37 .............................. TGCTGAGACGTTCACTTGATTGGTGCCTAAAATCTTG 11905 30 100.0 36 .............................. TATTTTTGTATGGAAAAAGTAAGCGATTTAAATAGC 11839 30 100.0 36 .............................. GCATAAATAGTAAATTCTTTCATTTTTTGTACCTCG 11773 30 100.0 35 .............................. AAGAAGTCAGAAAAGGAATTGGCTAAGGACGTTAA 11708 30 100.0 36 .............................. AGCTTTAAAGCTTCAGGGCTCTGCACAAACTCAAGC 11642 30 100.0 37 .............................. CCAATCAAATCATCATTAAGGAAATCTGCTGCAAACG 11575 30 100.0 35 .............................. CATTAATAGCCGTTGTCGTCTTACTTCTAAAGTGT 11510 30 100.0 36 .............................. TATGGCGAAAAATTAGAAGAAAATTTTGTCAAAATT 11444 30 100.0 35 .............................. TCTATCTATATCCTTTCTTTTGGTCGTTGGACTTT 11379 30 100.0 36 .............................. AGATTTGTGGGCGCTTTAATATTGAAAATGCAGAAG 11313 30 100.0 36 .............................. AATTCACGATTATATACTTCATCAGGTGCAAGACTA 11247 30 100.0 35 .............................. TTTCAAAAAAAGTAGAAAACTACAAAGAGCTTGCT 11182 30 100.0 36 .............................. AAACTTGAATGATCTATAGTACCTCTTTTTGAGTGA 11116 30 90.0 38 ............T.............G..T TTCTGAAAGTTTAATCTAAAAGTTTTAGTAGTTGGTAG 11048 30 83.3 36 ..C.........TC....G..........T AAAGCCGAATTTTACACCAACTTTACTAAATATGCT 10982 30 76.7 0 .A......C...........G..AA...TT | ========== ====== ====== ====== ============================== ====================================== ================== 20 30 97.5 36 GTTTTTATTTAACTTAAGAGAAATGTAAAG # Left flank : CCTATGAGCCTTATGTTATGGGATGGTAATAGATATGTATGTGATTCTGGTTTACGATATCGTAATGGATAAACAAGGTGCTAAAGTAAGTAGACATGTTTTCAAAATATGTAAAAAGTATTTAACTCATGTTCAAAATTCAGTATTCGAAGGTGAACTAACCAAGTCCCAGCTTGAAAGCTTGAAGAATGAGTTGGATAGATGGATTCGACAGAACGTTGATTCAGTGATTATATTCAAAAATAGAAATAAAGATTGGCTTGATAAAGAATTTATGGGTCAGGATTTAACTGATTTAACGTCGGATATATTCTAAAGAAGAATCTGTCGATGTAAGATACGAAGAAAATCCTGGGAGATCGACAGATTTGCAAAATGCCGGTACAATGATATTTGTGCGATTTGTCTAATGATTTTAGTGATTTTTGGATGCGTTTTTGGTTAGGTCGACAGATAGGGCCGTTGAATCTATTGATACAGTAGGACTGGTAGTTGCAACT # Right flank : GTGTGATTAAAGTCAATTAAATATAAAACATAAAGATTTATATTTAATTTACGGGAAGGAAACTACAATCAAACATCCTACTAAAATCCTACCAATTAAACTGGTAAAATAGATAAGTAAGTATAGAGAACAATTTTTATAAAAGGGGAATAAAATGGCAGATAAAAAATTACTTCTAATCGATGGTAACTCTGTAGCTTTCAGAGCCTTTTACGCTCTTTATCGTCAACTAGAATCTTTCAAGAGTCCGGACGGCCTGCACACTAATGCCATTTACGCTTTTAAGAACATGCTCGATGTCCTTTTAAAAGACGTTGATCCAACCCACGTATTGGTAGCTTTTGATGCAGGAAAAGTCACTTTTAGAACAAAAATGTATGGTGAATACAAAGGTGGACGTGCGAAAACTCCAGAAGAGTTGCTCGAACAAATGCCTTACATTCAAGAAATGCTGCATGACTTGGGTATTAAAACTTATGAATTGAAGAATTATGAAGCAG # Questionable array : NO Score: 3.14 # Score Detail : 1:0, 2:0, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATTTAACTTAAGAGAAATGTAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [15-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA //