Array 1 2106613-2107922 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP019392.1 Escherichia coli strain XH992 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 2106613 29 100.0 32 ............................. GTGACCATAAGGGCATTTCATACTGCCTTGCT 2106674 29 100.0 32 ............................. GTGAACGTGACAACGCCCGCGACAGAAACGTC 2106735 29 100.0 32 ............................. GGAAGAAGCGGTAAAGCGGGTTCCAGTTCAGC 2106796 29 100.0 32 ............................. AAATTAATTTCGAAACGGGCGTTGATGGTGAA 2106857 29 100.0 32 ............................. GCTGGCGCACCTTACGCAAAAATAGACGTAAA 2106918 29 100.0 32 ............................. CCAGGGAGCGAAGCTGTGGCCATGCTGAAAGG 2106979 29 100.0 32 ............................. GGGTTCTATTTCCTCGGGATTTGCCGACACGC 2107040 29 100.0 32 ............................. GTCAACGCTGGTCAGGCGTGGTACTTCCTCCG 2107101 29 100.0 32 ............................. GCTGCCGCGCTTTCGGTGTGGGAGCAGTATGA 2107162 29 100.0 32 ............................. AAACTCCGTGGTGTAGTGCGTTTGTTGGTGCG 2107223 29 100.0 32 ............................. TTGGTATTAACGGGAATGTAGTCACTCCAGGA 2107284 29 100.0 32 ............................. GCGATCGTATTTTCCGCTACGTCGCTCAAATG 2107345 29 100.0 32 ............................. TCGTTGATGGTGTGATGAGTGTACAAAAAAAA 2107406 29 100.0 32 ............................. ACGACTGAATCCGGCGAGGCTATCAACTGGCC 2107467 29 100.0 32 ............................. CCGCACACGTCGAGCTGGTGGGGATTAATGCT 2107528 29 100.0 32 ............................. CAGTAAACGTTCGCGCGTTCTCGCGCTCACGA 2107589 29 96.6 32 ............................C TCTGTGTATTCGCTACCAGCCAGCACCGGTAC 2107650 29 100.0 32 ............................. CAGGGTAACTGGCTGCTCCTCAACCATTCCGC 2107711 29 96.6 32 ........C.................... GGGTTTTAGCGACCGGACCAGAGTACGCAACA 2107772 29 96.6 32 ........C.................... TTGCGCCTTAAGTTCCTTAACTTCCTCTGTAT 2107833 29 96.6 32 ........C.................... GGAGTGATGAATTGGAAGTAACGGATAACCGC 2107894 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 22 29 99.4 32 GTGTTCCCTGCGCCAGCGGGGATAAACCG # Left flank : GTCCTTGCCGCCGGTGAAATTGAACCACCACAACCTGCGCCGGATATGTTACCACCAGCTATCCCGGAACCTGAATTGCTAGGTGATAGTGGTCACCGGGGGCGCAGCGGATGAGCATGGTCGTGGTTGTTACAGAAAATGTCCCTCCGCGCTTACGTGGACGGCTTGCAATCTGGCTCCTGGAAGTACGTGCCGGTGTTTATGTTGGTGATACATCAAAACGTATTCGGGAGATGATCTGGCAGCAAATCTCCCAACTGGCAGGTTGCGGAAATGTGGTCATGGCCTGGGCGACCAATACCGAGTCGGGTTTTGAATTTCAGACCTGGGGTGAAAACAGACGTATTCCGGTGGATTTGGATGGGTTACGGTTGGTTTCGTTTCTTCCTGTTGAGAATCAATAAGTTACCCGTTCTTTAAAAATAAGGAAAAGTTTGAATTTAGTTGGTAGATTGTTGTTGTGGAATAAAATTGTTTAAAAACAGATACGTATGCTTAGT # Right flank : GGACGCACTGGATGCGATGATGGATATCACTTAGAGTTCCCCCCGCCCCTGCGGTAGAACTCCCAGCTCCCATTTTCAAACCCATCAAGACGCCTTCGCCAGCTCTTTCACCAGAGGTAGCATTATCCGCATAACGTCACGGCAGCGACGTTCTATTCTTCCAGGAAGTGCCTTATCAATATGTTGTTGATTATCCAGTCTTACGTCATGCCAGCTATTTCCCGCAGGGAATGCAGCTGTTTTTGCGCGTTGCTGATAACCATCCTTATTTCCAAGATTCCAGTTGGTCGCCTCCACCGAAAGTACCGCAATACCGGCTTTGTCGAAAACTTCGGCGTCATTACAACAGCCAGTACCCTTCGGATAATTTTTATTCAAACCCGGATTGGTCGTTGCGGCAATTCCATGACTACGCGCAATTGCCAGCGCCCTGTCGCGCGTTAATTTCCTTACTGCTTCAGGGGTTTTTACACCGCTGTTGAAATACAATTTATCGCCAA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCTGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCTGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.30,-5.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //