Array 1 25612-25978 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_MLQN01000020.1 Helicobacter sp. CLO-3 PROKKA_contig000020, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                      	Spacer_Sequence              	Insertion/Deletion
==========	======	======	======	=====================================	=============================	==================
     25612	    37	 100.0	    29	.....................................	ATGGAAGAGGTGTTTATATTGTAGACTAT	
     25678	    37	  97.3	    29	T....................................	TGCAAATATGCATAAAGGAAGCGTGATTA	
     25744	    37	  97.3	    29	T....................................	CCTTTGTGTTTGCATATCTCGCGCGAATT	
     25810	    37	 100.0	    29	.....................................	TTAGTAGTATTTTTAGTGTGTGTTCTATT	
     25876	    37	 100.0	    29	.....................................	ACTCGTTTTTTGGCTCGCATAAAATCATC	
     25942	    37	 100.0	     0	.....................................	|                            	
==========	======	======	======	=====================================	=============================	==================
         6	    37	  99.1	    29	AGTTTTAGCCACTTCATAAATCTTTTTATGCTAAAAT	                             	       

# Left flank :   CAATGGATACTATTTTATATAATACACCAATTTGCCAATAAGTTACATGCAGTATGCTGCAAGTATTTACAGATGTTTTATTATAACATTGCCTTGCATTCTGTCATCATTATACGCGAATACAATGTGCTACTCGCACAAAGGCTTTTTAGATTATTCATTCGTATTTTATGTTTTTTGCAATTGTCTTGGCGCCTATTTTGACTATTTAGTTCTAGATTTGCCGCACAAAAATCAGAAAATCAGAATTCGCATTACATTGGTATTTTTGGTGATATATGTCAAGTCGCAATAATGTTTGCCTGCTCTATTACAACAAGTCTAGCGCTTAAATAACAATATGGACAAAATTATGCTTATTTTGATGCACCTGACTAGGCTTATATACCCTCATTAGTTTGATTACCAAGCAATTTTATACACAAAATGCAAATAAAATGCCATCCATTTATGTATTATATGATAAAATACTAAATGTTAGCCAATGACAAATTTAACTT
# Right flank :  TTTGTTGTTTAGGCTAAGGTGCGCTTTAGTGCTTAAAAACAGCGTGCGAAACGCAGAATCAAACATTTTGCTTCCTTTGTGCTGGCGTGTGCTATATTGACATTTTTAGCCTTTAGATTCTGGCTTTTTAAGTGCTGCTGCTTTGGATTCTGCGCCGCTAATTTTTTACTATTTTTACTATGCTATCGCTACTTTTTGCGCTTTTTGCTTGTTTTGAGTTTTGCCTCACCTCTTGGGCTAAATTCGGCCTTGCGCACTTCCCCAAGCGGCGATACATGCCATTTTTCAAATACTTTTAGATTCTGTATGCCGATGCTTTCTCCGATCACTTCTGCCTGCGTAGCGCTTTTAAAAAGCAGCTTTTGGTTTTCATTAAGCACAGAAAAATGATTATTATGACTCCTTACATCTATTTGCGCATTGCTAGAATCAAAACTTACAAAATAGCAAAGCTCTGGCTCTTGCATTTCTTTTCTCTGCACCAATATCAAATCATCTTT

# Questionable array : NO	 Score: 6.21
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     AGTTTTAGCCACTTCATAAATCTTTTTATGCTAAAAT
# Alternate repeat :   TGTTTTAGCCACTTCATAAATCTTTTTATGCTAAAAT

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:75.68%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  NA [-2.40,-2.30] Score: 0/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: F [76.7-56.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [0.27,0   Confidence: MEDIUM] 

# Array family : NA
//