Array 1 900549-901970 **** Predicted by CRISPRDetect 2.4 *** >NZ_RJVI01000001.1 Inmirania thermothiophila strain DSM 100275 Ga0244718_11, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================== ================== 900549 36 100.0 34 .................................... TACCCGGGCCGCCCCGTCTTCGGGAGCACCCAGG 900619 36 100.0 33 .................................... TTCTCGGCCTTAGCAGCCTTCGCAGGAGCAGCC 900688 36 100.0 32 .................................... AAGACGCCAGGCAGGGTATTCAGGGAAGCATC 900756 36 100.0 33 .................................... GGTGCAACTCTGTGGACAAACCTTCATCGACAC 900825 36 100.0 34 .................................... TTCTTCGTGACAGGGTCGCTATCAAGACGCGCCG 900895 36 100.0 34 .................................... GGGACGGCATCAAGGAACCCCAGCGCCGTATCGG 900965 36 100.0 33 .................................... TTCTCGGCCTTAGCAGCCTTCGCAGGAGCAGCC 901034 36 100.0 34 .................................... ATCGCCGCGGAGCCGGGAACGCGATCAAGTCCTG 901104 36 100.0 33 .................................... TGCTCATGCTCGTATCTCCTATCTTACTCACCC 901173 36 100.0 32 .................................... AGCTCCGCGGCAGGGATGCCGCGGTCAGCGCC 901241 36 100.0 33 .................................... AGCTCGGGCCAGCGGGCCTCGTCCTTATCCGTC 901310 36 100.0 34 .................................... CTGAGGGCCGCGTTGCGGCTGTGCGCCGCGCGCA 901380 36 100.0 34 .................................... GCGTCCAGGCGGGATGGATCCTCCGCCACCGCCT 901450 36 100.0 34 .................................... GAAGCCCCGCCTCCTGCAACATACGGATCGCGCT 901520 36 100.0 34 .................................... CTGATCGCCGCGGGGTAGGTATCCCATGGGGCCT 901590 36 100.0 31 .................................... GCCCCTATGGGATGGATCGCGCCAGCAGTAA 901657 36 100.0 32 .................................... GGGCTTATTTAGGGGAGCCAGCTCCGCGGCAT 901725 36 100.0 34 .................................... TCTTCGAGGCCCGGCATTGCGAGGCAGTCGCCGC 901795 36 97.2 34 ...........................A........ GGCGACTACAAATCGCCCAGAACCTCGGCCAGTG 901865 36 100.0 34 .................................... GTCGAGACGGCTGTTCACATTGACCGCGCCCACC 901935 36 80.6 0 ...........T...G.G.......T....C..C.G | ========== ====== ====== ====== ==================================== ================================== ================== 21 36 98.9 33 GTCCGAACCGAGCCCTGACGAACAAGGGATTAAGAC # Left flank : GGCACAGTCCCATCACCGTGCGTGGGGTCGAGATCACGCGCGAGCAGCTGCAGGACGCCATGCGCGATCTTTTCCACAATGCGATCCGCTGCGGTGCCCCGCCGGTGCGTTTTGCCGAGCGCTGGTGCGAGGCGCACGGGGTGCGGATCAACCGTGCGCTGCTGGAGTGGCTGGTGGTGGAGCTCATCTGCCAGATCGGCGAGCGGCACTACGTGGGCCGGCCCCTGCAGATCGTTCCCGGCTGCGGGGGCGGGCGGCTGAACTGAGGGCGGGCGCAGGCTGCGGCCGCGCAGGGTGCTCCCGCCCGGCCCGCTGCCCCCCTGCCGCTCCGCACGGCCCCCCTTTCCCTCGGTCGGCCTGCGCGCTATGCTCGATCCTACGCGCCGCACCTGCCGCGGATCTTGATCTTTGTCAAGAACGGATAAAACTTCTGCGATGTGCTGGAATCCCGCAAGGGCCCTTGTAAGCCGTTGTTTCTGCGGCGTTTCTGGCGCCGACCT # Right flank : GACGGCCGCGCCCTCTGGGCGCGGTTTTTTTTTCGACGTGCGGGTCGCAAGCGGGGCGCGGCGGCTCCGGCGGCGGGCGGAGGGGCGGGGTTCGGGGGGCGAGGGGGCAGGGGCGTGCGGCGGGTGAAGCGGCGCGGGGCGGGAGGGGCGCGGCGGGGCGGGGTGGGGGGAGGCGCGGGCGATGGGCGGGTTAGGCTGAGGGGGGAGGCGCGGAAGGGGGGGTGCTTCGCGTGGCCTGGGGTCGGGGGTGGTGCGGGCGGAGCCGTGGGCCGCCGCGCCCGGGCGGGCGGGGCGCGAATGGCGGCTCGGAGGGGGCGCGGGTCGGCCGGGCCACGGGTTCGATGGTGCCGGCGAGAGGACTCGAACCTCCGACCTACTGATTACGAATCAGTTGCTCTACCAGCTGAGCTACACCGGCGAAGGGGCGGAAGTATACGGCGGGCGCTGGGGGGGGGCAACCGTCAGGCGCGGGCGGCGCCGCGGATACGGATGACGAGGTC # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCGAACCGAGCCCTGACGAACAAGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [12,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.00,-5.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [38.3-28.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.15,0 Confidence: HIGH] # Array family : NA // Array 1 810751-814926 **** Predicted by CRISPRDetect 2.4 *** >NZ_RJVI01000002.1 Inmirania thermothiophila strain DSM 100275 Ga0244718_12, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 810751 28 100.0 33 ............................ GCTGACGAGCTTGCGGATGAAGAGTGGGACCGA 810812 28 100.0 33 ............................ TTCGCCGCGCCCTGGCCCGCAGCCCGGGCTGGT 810873 28 100.0 33 ............................ TAGCTCGTCCATCGCTCCCCTTTCTGCGGGCTA 810934 28 100.0 33 ............................ CCGGTGGGCCCGATCAGGCAGGGGCGCAGCCGC 810995 28 100.0 33 ............................ GCGCGCGCTGCCGCCGCGGGGGCTACTGGACCC 811056 28 100.0 33 ............................ GCGTCCGAGACTGCACAGCTGCGAGCTGCACGC 811117 28 100.0 33 ............................ TAGCTAGTAGATAGTAGTAGATGGTGTCGAATG 811178 28 100.0 33 ............................ TGGGCGGCCGAGGCCACCAAGCGGCCCGTTCTT 811239 28 100.0 33 ............................ TAGGGTGAGGGCGACCGAGAGCTGTTCCCCGGT 811300 28 100.0 33 ............................ CCAAGTAGATCTGCTCCAGGCCATCGTCCGGCA 811361 28 100.0 33 ............................ GCAGTCGCGCCGCCTGGATAACACCCGCCTTGA 811422 28 100.0 33 ............................ TGTGCGCTGCCTCATGCAGCAGCAGGGTCACCC 811483 28 100.0 33 ............................ TTTATATGGGGATGGGTGGAGGAGAAGGACACC 811544 28 100.0 33 ............................ CCGAGGCAGGGAAAAGCCCATCCAGCGCCGCAC 811605 28 100.0 33 ............................ CGGCACCGTGTTCCGCGGACGTGTCGACACCCA 811666 28 100.0 33 ............................ CGCGGGCTGGCTATCGACCGATCAGGCGCAGCG 811727 28 100.0 33 ............................ GACACCATTCTTTACTACCATTCCTTACTACAG 811788 28 100.0 33 ............................ CTGGTAGAAGAAGGACTGACGAAGAGCAATCTT 811849 28 100.0 33 ............................ TCAATGACTTGTTGTCGCTTGTGACACATGTGA 811910 28 100.0 33 ............................ AGCGCGCGCGGACGGAAGCTGGGGTCGGTGCCA 811971 28 100.0 33 ............................ CAGCGACAGCCACCGGCTCTCGCTGCGCGAGGC 812032 28 100.0 33 ............................ GTTCGGCCAGGGGAAGATCCCCGATCCGCGGCT 812093 28 100.0 33 ............................ GCCGGTGCGTATGATCAAGGCGGATCCCGTAAT 812154 28 100.0 33 ............................ GCGATGGCTGCGACGTTTTCCAGGAAGACGTAT 812215 28 100.0 33 ............................ TGTGCCGGCGCATCGGGGGCTCGCCTATATCGT 812276 28 100.0 33 ............................ TCGTGTGACAGGTGGCTTCTCCGACCTGTCACA 812337 28 96.4 33 .........................G.. CAGCACGGGCTTCGCGCTCACGGTCAAGACCTC 812398 28 100.0 33 ............................ TAAATTGGTGCCCATCCAGGAACGCCAGCAGTA 812459 28 100.0 33 ............................ CGCCGGGCTCGACGACATCCTCGACAAGTACTG 812520 28 100.0 33 ............................ CATCTTGTCGGCCATCCTGGGCACCCCGGTGAA 812581 28 100.0 33 ............................ TTGATCGAGCCGTCCTCCTTGATCAGGCAGTCG 812642 28 100.0 33 ............................ CCGCGCAGAGATGCGCTGCGGATCAACCTTTTG 812703 28 100.0 33 ............................ CTACGTCGGAGGAGTGTTGGTCAACGCGCGCAG 812764 28 100.0 33 ............................ GATATTCACGTCCCGTGCCCCTTCCGTATACAA 812825 28 100.0 33 ............................ CGCGCGCGGGTCCGCTCCGTATTTCGCGCGCAG 812886 28 100.0 33 ............................ CCAGAGCCTCGGCGAGACCTGGGAGGACCGCTC 812947 28 100.0 33 ............................ TCGGCGAGCGCCTCGCCGGCGATCTCCAGCGTC 813008 28 100.0 33 ............................ CAGCACCGGGACGACCACCTACACTGTGGGCAC 813069 28 100.0 33 ............................ CGTGCCGGCGCATCGGGGGCTCGCCTATATCGT 813130 28 100.0 33 ............................ CGGGCATGCTTCCAGTTCCTTTCGCGCCGGCGC 813191 28 100.0 33 ............................ CCAGAGCCTCGGCGAGACCTGGGAGGACCGCTC 813252 28 100.0 33 ............................ CCTCAAGGAGCTGCGGAAGGAGGAGCGCTGATG 813313 28 100.0 33 ............................ CGCCACGGGCTGGGCATGCATGTGCGAGCCGCA 813374 28 100.0 33 ............................ GCAAAGTACCTGGAATCCGCGATAAACGACCGC 813435 28 100.0 33 ............................ GTGCGCATCCATCGTAAGGGGATGCCTGTGAGG 813496 28 100.0 33 ............................ CCTCGTCCGTGCCCCACACGCCCGTGGTAAAGA 813557 28 100.0 33 ............................ GCAGTTCGGAGGCGCCGCCGTCCGCGCATCGTC 813618 28 100.0 33 ............................ CGCCACGGGCTGGGCATGCATGTGCGAGCCGCA 813679 28 100.0 33 ............................ GCGGTCATTCAGCTCGCACCGGACCTGCTCGTA 813740 28 100.0 33 ............................ TGTCCTGTTTGCACAGAAAAGACGGGAGAAGTA 813801 28 96.4 33 ...............A............ CGCGGCGATGATGGTCTCCTCCACCTCCTCCGC 813862 28 100.0 33 ............................ CCGGCTGCATGGCGGCGACGATGATGGTCTCCG 813923 28 100.0 33 ............................ CTCGACAAAGCTGGCGGGGAGCAGCTTTCTGTT 813984 28 100.0 33 ............................ GTGAGCGATGCTTGGGCGGTGGATTCGGAATGT 814045 28 100.0 33 ............................ TGGTGCCGAATGGTGCTGTAGTAAAGAATGGTG 814106 28 100.0 33 ............................ CCTTCACCTTGTGCAGCTTGGGCCGTGGCTTGG 814167 28 100.0 33 ............................ CTATGCGCGAGTCGGTCCGTATCGTGCTGGAGG 814228 28 100.0 33 ............................ GGCCACCCGGACGCTCGGGCCGGTCTTCATCGA 814289 28 100.0 33 ............................ CGCCGGGCTCGACGACATCCTCGACAAGTACTG 814350 28 100.0 33 ............................ CCTGTGGGGTGGGTGGCCGAGGGCGCCGGCCTC 814411 28 96.4 33 ............T............... CGTATACAGTCTGAACCTGCTACAGATGCTGAA 814472 28 100.0 33 ............................ GCACCCCCGCGTCGCCGCTGCCATCGCCGCCAT 814533 28 100.0 33 ............................ CGGCTGGATGAGCGGGAAGATGTTCATGGTCGG 814594 28 100.0 33 ............................ GCAGGCGCAGCAGCACAGGGTCCATGTGCGGCC 814655 28 100.0 33 ............................ TGGGGCGGTTTCAACCCCTGCAAGGCCAGGACG 814716 28 100.0 33 ............................ GCACCCCCGCGTCGCCGCTGCCATCGCCGCCAT 814777 28 100.0 33 ............................ CTCACCCCCGGAAGCCCGTCGTGGTTTGCGGTT 814838 28 100.0 33 ............................ CCAGCGACAAATCAAACACTTGACAGCTGTCAA 814899 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 69 28 99.8 33 GTCTCCCCCGCACACGCGGGGATCGACC # Left flank : GAGCGCGAGATCCGCTTCACCGCCGCAGGCTGGTTTCGCAAGAAGAAGCTGATCCCCGCGATGATCGACCGCATCAAGGAGCTGCTTCATGTCGACGATGACCGTGGTGGTGACTCGTAACGTCTCGCCGCGCATGCGCGGCTTTCTCGCCTCCACCATGGTCGAGCTCGCCCCTGGCGTCTACAGCGCGCCGCGGCAATCGCCCGCCGTGCGCGACCGCATCTGGCACGTGCTGCAGGAATGGTTCGTACTGGAGCGGGACGCCTCCGTGGTCCTGCTCTGGGAGGAGCCAACCATGCCGGGCGGACAGGCCGTGAGGACGCTGGGGGTTCCGCCGGTCGATCTGTGCGAGGTGGACGGGCTGCTGCTGGCGCGTCGAAGGATGGACCCGGAAGCCGCCGCGGCCGGGTGGCTCAAAGCCTGCCGCGGAATCCGCTGAGTCTCTGGACTCGTCGCTCTTTCAAAAGAGGTCGCGTACAATCATGGAGTTGCATGCTAGG # Right flank : CCCGGCGGTTTCACCGCCCGGCCGAGGAACCCGCGTTCGTGAAAAGCCCGTGGGCGGGCCGCGCCGGTGCCGGCTGCACCGGGCCCGAGGCGCCACCGCGCAGCGCACGGCAACCCTGCCGTGCGCCGCTTGGGGCGGCCTGCTCGTCGGGCCGGTGATGCTCTTCTTCCTGACCACCGGCGCGTTCCTGCTCAAGCTGGGCGCGCTGGCCGTGGTGGGGGTGATCGCCGCTTACGCCCTGGTGCCGGCCCTCCTGATCTTCGCCATGTTCGACCGGCGTTGCAGGTGACGGCCGCGCACCGGGGGCAGCCCCGTGCGGAGACGGAAACGGCCGCCCGGGGCGGCCGTGGGTGGGGGTTGGTGGGCCGTCAGGGACTCGAACCCCGGACCTACTGATTAAGAGTCAGCTGCTCTACCAACTGAGCTAACGGCCCCGAAGAGACCCGGAAGGATACCCGCAGCACGGCGCGGGCATCAAGGTCTTGGGGTGAGCGATGGGA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCCCCCGCACACGCGGGGATCGACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [50.0-25.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.42,0 Confidence: HIGH] # Array family : NA //