Array 1 920-15 **** Predicted by CRISPRDetect 2.4 *** >NC_021592.1 Ferroplasma acidarmanus fer1, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 919 30 100.0 38 .............................. CTAGACCAAAAAAAGGCATAATCATTTAAAAAATCAAC 851 30 100.0 37 .............................. ATTATCTCGCCATCTTCATGAAACCGTTGAATTTTCT 784 30 100.0 36 .............................. ACGGAGACCTGCTGGGCATGATATTCCCTGTGCAGA 718 30 100.0 37 .............................. TTGGCACAAGGGATCTGTTCCTTGGCATTGAGGCACG 651 30 100.0 36 .............................. GCAAGTGCAACAGTTTACCAGAACAATACTCTTTTT 585 30 100.0 37 .............................. TATTCCCTGACGGTTGCAGTGAGACCTATAAGATATT 518 30 100.0 37 .............................. CGGATATATCCTGGCATGGAGAACCTCCAACGAGAAG 451 30 100.0 39 .............................. GCCCTGGCGGGAAAAGATACGGGGAAATGTAATCCCTCA 382 30 100.0 39 .............................. CTTTTAAAAGCTGGTTTTTGTAATCCCTTAATTTTTCAG 313 30 100.0 39 .............................. TTAAAATAATTTAAACGTCATTACAACGTTGTTCATCAA 244 30 100.0 36 .............................. GCTTTCAGGAACTCCTAAATCGAATCCAGCAGCACC 178 30 100.0 37 .............................. GAAAAATTAGGTAAATGAGCTTTATATCTTTTTTTAG 111 30 100.0 37 .............................. TAAGCATTTCTTTTATATTAGTTGGTTTGTCTAATAA 44 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================= ================== 14 30 100.0 37 GTTAAAATAATTCCATATAGGAATTGAAAT # Left flank : CTTGATATTGGCCATGATTACATGAGCAATTTCAATAAAATATAATAGCAATAAATTAAATCGGGCTTACTTAATAGTAAGCCCTTACCCCTTCCATCAGGCAATATTATGATCTTAATTTTTTATAATAATTTTTCCATTGGATTTACAACCAGCAATCAGAGAATTTTAATTATAATTCCATTGCTCGACAATAATTGTCATAGCAACACTGTGTAAATTGATGTTATCTTTATGAAATTGCAAATGATCAGATATAAATATTGGAAATCTGTATGTTAAAAATAGATGTGATAGGCACAGTTAAAAAAGAGAACTCAAACATTATATAAAATCCGGAATGATTGTTTTGTAATTCTATTTAAATACTTAAGCTGATTAAAACTCGTATTATTTATATATCATAGAAAAAAACTCATAAATTTTTAAAATTGCATATAAACGTAAAAATTCACAAAAATTAAGTAATATACTGTGTTACTATTAAATTAATGAACTGG # Right flank : TCAAAATGGGAATAT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAAAATAATTCCATATAGGAATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.30,-4.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [16.7-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.77 Confidence: HIGH] # Array family : NA // Array 2 1194568-1195066 **** Predicted by CRISPRDetect 2.4 *** >NC_021592.1 Ferroplasma acidarmanus fer1, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 1194568 30 100.0 39 .............................. AAAATAGGTTTTTACGGTAATGAGGGTTGCTGTGGAAAT 1194637 30 100.0 36 .............................. TTTTCATATCTTTTGCCACCTCCGAATTTGATAAAT 1194703 30 100.0 37 .............................. CGTAAACGGGGGGGTAATTAATACCGTGTAGAATATA 1194770 30 100.0 38 .............................. TTGTCCTAAATCCTATCAATTCCTTTGTTTCCATTTTA 1194838 30 100.0 37 .............................. TAACACCAAGTCCTAATAAATTATTCCATGCCTCTAA 1194905 30 100.0 35 .............................. TCTGAGGCCTGATTACCTGAGGATTCTTGACCTTG 1194970 30 100.0 37 .............................. ATAAAATCCTGGACTGTAAACACAATCCGAGCTGCCG 1195037 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================= ================== 8 30 100.0 37 GTGTTTAGTCTATCTATAAGGGTTTGAAAT # Left flank : TATATGATGTTTCTGAGAAACGTGTCTTTAAGGTTTTAAAAATAGCGAGAAAATATATAACCTGGATACAAAATTCCGTTTTAGAAGGTGAAATATCGAAAGGTAATTATGAAAAATTTAAAGTTGAAATAAGAAAGACCATTAAACCGGAAGAAGATTCAATATTATTCTATATAATTAGGGATTTAAAATATACATCCAAAGAGAATATAGGAATTATAAAAAACACAGATGAAAAGTTCTTTTAATTTCGTCGACCAACAATAATGCAAAAAATACTGGAGGTCGACGATTTCGTATTTTTTAATCATTAATATTGTAAAATAAAGGCTTTAAAATTAATATAATTTAATTATAATGTATACTATTAAATAATATTAAAATGCATTTAGTAAAATTATTTATAATATTATATTTCGTACCTGTATAATTTATAGAAGCTTCAAAACACGAATTTATAGAATAAAAATATAAATATATAATGGTAATATAATTGATGG # Right flank : TTTTATGCCGAGTGCTGATTTTAAGTCTACTACTATGCAATGTAGGTTGCTATCACAGATAACCCTGACATTCTTAAACCCAATAAAGTATAGGTACCAACCTACCCTATACTCTATTAAGAGCAATAATATTTATTATTATAAGATGTCTCACATTTTAAGAATTGACTATTTTCATTACCTCCCTTGGTTTTTCTCCCAGTTCCCTGTTTGATATTATCATTAAATTGTATGCAATGACCTTTAATCCAATTGCAGCATCATAATCTCTATTGCTTTTGTATCAGATATTTTCACACTTCAGTATCTCTTCAAGTATGCTGAAGGTACACTTTATTTCCCCATCTTAATTGGTACATTTGAAACATATTCCTTTCTCAAATCAATGCCTATCTTTCTGTTTGCCGGTAACTTCTCATGAATAATACACCTCCTTATATTTGTATCAATTACTGGAATTTCATGCGTATTTTTAAACACATAGTCATAAATATCCAATG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTTAGTCTATCTATAAGGGTTTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [81.7-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.27,0 Confidence: MEDIUM] # Array family : NA //