Array 1 275136-277724 **** Predicted by CRISPRDetect 2.4 *** >NZ_UKBY01000003.1 Klebsiella pneumoniae strain EuSCAPE_PL015, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 275136 29 100.0 32 ............................. CATTTCATAGTGATTCGACTATTTAATTAACA 275197 29 100.0 32 ............................. AGTTCACGACAGGCAAAGTCTTTACGGTATGC 275258 29 100.0 32 ............................. TCTGCTGGTTACAGGAGAAAAAAATGATTGGT 275319 29 100.0 32 ............................. CGTGAGCATCTGGGCATCTTCAGTGATAGCGT 275380 29 100.0 32 ............................. TATTTTTGAGATGATGGATTGTTGCACACCAG 275441 29 100.0 32 ............................. CACAGATGTATAGCCAAGCGTTTTGCGCCAAA 275502 29 100.0 32 ............................. CGCTTCTCGGCTTCTCTGAATTTATCCGCCCA 275563 29 100.0 32 ............................. ATCCCGACCCGCTCCTCCAGAGCGAATACGAT 275624 29 100.0 32 ............................. TGCTTTATGGCAAATAAGAGAGGATATAACCA 275685 29 100.0 32 ............................. GCGTCCGCCTCCCAAATAGCCAGGCTGTTATT 275746 29 100.0 32 ............................. CTTCCCGCGCATATTCATTGCCGTCAGCCAGC 275807 29 100.0 32 ............................. CCTGAATTGGGTGGACACCACAGCAGTTGGGA 275868 29 100.0 32 ............................. TAAATCCCAGCTGGTTTGACGTAGTGGCACTG 275929 29 100.0 32 ............................. CAATGAAGGCTTATAAGGGTGAAGAGAGCAGG 275990 29 100.0 32 ............................. CAGTCGGTAACGGCTGGGCGTGACCTCAAAGC 276051 29 100.0 32 ............................. GTGCCATTTTTATTTTGCTTAAAATAAATATC 276112 29 100.0 32 ............................. CCTATTGTGTTCAGTCGTAACAGCTGAATCAG 276173 29 100.0 32 ............................. GGCGCGGCGGAATAACCACTTTATGAGCAGGT 276234 29 100.0 32 ............................. GCGACCATGCCGTAGTCTTCAATGACGTAATC 276295 29 100.0 32 ............................. CTGGATAGACTGTTGCTTCACGCCAGCTTTGG 276356 29 100.0 32 ............................. GTTTACTCACCAGTTCGTCGAGGTGGTAGGAA 276417 29 100.0 32 ............................. TTGTCATCGTTCGACAGCACAATGGCTTTGAG 276478 29 100.0 32 ............................. CTTTCTATTCCACGGCCCGGTCCCCGGGCCAT 276539 29 100.0 32 ............................. CGATAGCCTGGCGGTTTAACCATGAAAGAATG 276600 29 100.0 32 ............................. CAAACGCAGATGAAAATTCATGGGTCGAATAC 276661 29 100.0 32 ............................. GCGTCCAGTTGAACCCGGCACATTCCCGCTGG 276722 29 100.0 32 ............................. GTCGACAGGGGATTCTGGAGCGAAGAAAACAC 276783 29 100.0 32 ............................. AGGTCCTGGATGCTGGAGTTATCGGTGTCCAT 276844 29 100.0 32 ............................. GTGCCGAAGGAGCCGACAGCGCAGATGTATGA 276905 29 100.0 32 ............................. TCACGCCCAGGGCTTCCTTTGCGTTCCGAAAA 276966 29 96.6 33 ........T.................... CCCACAAAGAGATTTTGGAGCAACGTGGTCAGC 277028 29 100.0 32 ............................. CGACCTTATGATTCGTGTTTCGTGAGGGACTT 277089 29 100.0 32 ............................. AGGGCTGGTCCGACTCCCAACTGGCGAGAATG 277150 29 100.0 32 ............................. GTGCTGGCCTTGAGCTTTTCAGCAATACGTCC 277211 29 100.0 32 ............................. GTGCTGGCCTTGAGCTTTTCAGCAATACGTCC 277272 29 100.0 32 ............................. GTGCTGGCCTTGAGCTTTTCAGCAATACGTCC 277333 29 100.0 32 ............................. GTGCTGGCCTTGAGCTTTTCAGCAATACGTCC 277394 29 100.0 32 ............................. GTGCTGGCCTTGAGCTTTTCAGCAATACGTCC 277455 29 100.0 32 ............................. CCCCGTCGTCATTCGCGCATTCTGCGCACAGA 277516 29 96.6 32 .....A....................... TAACAGGGCCATTTTCCCGGGTTGCCAGACGA 277577 29 100.0 32 ............................. TCACCCTCGTAGCCGATACCACTTTCGCGCAG 277638 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 277696 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 43 29 99.3 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : CGTCCACTAACGTTATCGATCCTGAGGGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTTAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTGGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGTACCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //