Array 1 526254-525808 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACFQC010000002.1 Gilliamella sp. B14384H2 NODE_2_length_898695_cov_194.825554, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 526253 28 100.0 32 ............................ AACCGACCCAAACTATTATATTAAAAAATTAG 526193 28 100.0 32 ............................ ATTGCAATGCATACATTGCTGTCGTATTTGCT 526133 28 100.0 32 ............................ GTTATTATTAATAACCGTAGAATAATGTTTCT 526073 28 100.0 32 ............................ TCCAACACCACGAACTGTGGCGCTAAATTTAC 526013 28 100.0 32 ............................ ACTCAGGAAATGTTTTTATTAAAGATGCGTTT 525953 28 100.0 32 ............................ TATAAATATGACAATACAGAAACTGATTTTAG 525893 28 100.0 32 ............................ ATAAACAACTCTAGTACAAGACTCAATCCAAC 525833 26 82.1 0 ..........T........--.G.C... | ========== ====== ====== ====== ============================ ================================ ================== 8 28 97.8 32 GTTCACTACCGTGTAGGTAGTTTAGAAA # Left flank : CAGTTTCGCTCTAAATATAAAAGTTTATTTCTAGAAAATCAGATTGGAGTGCTTCATTTAGCGACATGAGCAATGTGCTGACAACTGAGAGAGGTTAGCATGGCAAACAGGGATGTTTGGCAAGGCTGTGTTTTGTCAGGAACAAATCACAGCCGGTGGGTTGAGAGCGAACGAAGGCGGAAGGCAGTCACGCAGTGACCATTTGCGTAGTCGCCGCGAGAGTTGGTAAAGAGGGTTCGCGCAAACCCTCTTTACTCGGACGTAAACGCCATATAGAACTAGCTACCAAACAACAAAACGTCCGAAACTAAAAGAACTAAAAAAGTTGAGGAACGGGGTTTTTTGAAACTTAAATTTGTACCCATTTCCAACCCTTTTTTTGACTTAAAATAAAATTATTAAAAATCAAAACATTAAGAAGTTACTCAAAAAAAGGGTTTTTAATAGTAAAATTACGCTTTGTCTTTTTGCCAACTGCATTTATAGTATGTTGTGTTCTA # Right flank : AGTCTTAACAATTATTTACCAATCTGAATTTGCTATAATTACCTAATATATCTATACTTTTTTCTGCAAGGATTGCATATTTTTAGATAAAAATTATAAATTAAAGGATTAAGAGCATGTTGAGATACCCTTATTTAGGCGCTATTTCTAATTTAATTGTTAATGCAACATTGACCAATAAAGAAAATATATCGAGTCACGGCCCTTCAATACAGCAATTATTCATTAATCAGCCAATAAAGCGAAATTCAACGTTTAATAAAACACTACTCAAATATTCATCCTCATTTGGCCAAACAATAGTGAAATTCTTGAAAAAGATTTGTTTATGTTCTATGGCTTTTTCAACTATATTTAGCCCTGTATACGCGTTAAGTTCATTTACCACAGAAAGTATAAAAGGTAGTGCACCATATTTAACGCTAGATGATGGTGTTAGTAAAATAACGAGTACAGAAGAGCTACTGGCAATTAAATTACCTAATGGTACTGTGATAACC # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTACCGTGTAGGTAGTTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.71%AT] # Reference repeat match prediction: R [matched GTTCACTACCGTGTAGGTAGTTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.70,-6.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [78.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 533549-533040 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACFQC010000002.1 Gilliamella sp. B14384H2 NODE_2_length_898695_cov_194.825554, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 533548 28 100.0 32 ............................ AAATCCGACACGAGCTGCAACACCGAAACCCA 533488 28 100.0 32 ............................ CAGATGAAAAATTCAGAGTGATCGCCATTTAT 533428 28 100.0 32 ............................ ATACCAGACCCAACCGTTAACATCCCGTTATC 533368 28 100.0 32 ............................ ATTCAGTCGCTTGGCGCGGTAATCGGTGAAGT 533308 28 100.0 32 ............................ TCAGGTGGCATGCATATAGTAGTCGTTGAGCC 533248 28 100.0 32 ............................ ACACACCATTAGGAATAGGAATAGGTGTTGGT 533188 28 100.0 33 ............................ ATAACTCTCTAATAACATTTTTTCCTTTTTTTT 533127 28 100.0 32 ............................ GCTGAGACCATGAATTACCGCCCATGCGCATA 533067 27 92.9 0 ........................-..T | A [533047] ========== ====== ====== ====== ============================ ================================= ================== 9 28 99.2 32 GTTCACTGCCGTGTAGGTAGTTTAGAAA # Left flank : TCCATATATTACCTAAACCCACAGCAGAACCGGCAGCAGCAAGCATAAATCCCATGCGAGAGCTCCACTGTGAATGACTTTTCTTCATAGTACCTGTACTCATGAATCTATTTTCCCTAGAGTTTTGATTAAATATTTAATTTTAGTATCAGCAAAAGCCTAACTATTTTTTTATTAGATAAATAAAATGCTAAATCATGCCATGAAATAAATTTATAAACAAGAAAACATTATCATTTATAACGATAACCAATAAAAAATTAAATCGTTAACCTTAAGTTTAATCGTGTTTTGAAGTGGCCAGAGTAAAAAACGAGCAATAAAAAGTTGAGGAGTGACGTTTTTGGCGATTACATTTAGACTATTGCAACCCTTTTTTTTACTTAAAATAAAATAATTTAAAAATCAATATGTTGAAAAATGGCTCCAAAAAAGGGTTTTTATTAGTAAAAATAGACTTTGCCTTTTTGCCAACAACATTTATAGTATATCTGGCTCTA # Right flank : TTTTTAGTCGTTACATTATTTTGACGAAAGAGATTAAAAATCATGTCAAATATGCCTTTTTGACAAGGCTATGTATATTCTAATACAAATAATAGATAATGTATAAATACTTAACGTGAATGAACTAGTCATGTAATGACTAACTAGTTTCGCTGTCGATGGCAAAAATTAGTGTGTGTAACCCCTTATTCGAAAATATCCTTTGTACTAAAATCCCCTCAGAAATTATTTAAACCTCTAAACGTTAGTGAGCTAAAACAATTCAATATGACAAAAAGTTGAGAAAAAGGGAGCATGAAATCTTTGATATTGATAATCATCAGCCCATCGCATATATTACATAGAATATTTACTTCTCTAAAAAGAATAGTCATGACACAAAACATCGATTTGAACGAAATAGATAAGTTTGCAAAACTTGCTTCGCAATGGTGGGATCCCAACGGCCAATGCAAACCATTACATATTATTAATCCATTACGAGTAGATTATATAAAACA # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTGTAGGTAGTTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: R [matched GTTCACTGCCGTGTAGGTAGTTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-1.00,-6.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 3 862977-861568 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACFQC010000002.1 Gilliamella sp. B14384H2 NODE_2_length_898695_cov_194.825554, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 862976 28 100.0 32 ............................ ACCAGCGCCCAGCAAATGAGAATTACGCATTG 862916 28 100.0 32 ............................ GTCATGGGCAAAATACGCAACTGGCGTTTGAT 862856 28 100.0 32 ............................ TGAATGTGGTCAAAAAGCCATCATCACCAAAA 862796 28 100.0 32 ............................ GATACAACCGTGAGGGTAAGGCGGTCGGTTTT 862736 28 100.0 32 ............................ AACTTAAGGGAAACACCCCGCTAGCCAAAGAA 862676 28 100.0 32 ............................ TTAACCGCCCCCAGTCTTTGTATAATTGATCC 862616 28 100.0 32 ............................ TGCATCGGCTGCGGCAAGCACTGGGGCGATTG 862556 28 100.0 32 ............................ AAAACGCAACAGGAGGGATTAGGCGTTACTCA 862496 28 100.0 32 ............................ ACGGGCAATAAATCCGCGGTTAAACCGAGTAC 862436 28 100.0 32 ............................ AAAAACATAAAATCATATATCAAACAGGTAAC 862376 28 100.0 33 ............................ CGCAAGGGCGGCTTGCTTAAAACTGTTTGCCTA 862315 28 100.0 32 ............................ TCTGGTCGCTTTGTGAGCGAGAGACGCCAGTT 862255 28 100.0 32 ............................ AAACTTTATGGTTATATCGTAAACGCTACTAT 862195 28 100.0 32 ............................ TTCGTTGCGCCAATATTTATTTTCGAACTGTT 862135 28 100.0 32 ............................ TACTAAGAGCCGAAAACGCCGCATTGACAAAT 862075 28 100.0 32 ............................ AACTAAATAAATCCGTTAGATTGGTACTACTC 862015 28 100.0 32 ............................ ATTAAAGCCAATGCGAAGCATATCTAGTGCGA 861955 28 100.0 32 ............................ TGCGCGCTCTCGCATGCGTCTAATGTTATCGC 861895 28 100.0 33 ............................ GCAATTTATTAAATAGTTAACGGATTTTTACAA 861834 28 100.0 32 ............................ CTAACCCCATTTTCGTTTGGTGTATTGTTTGG 861774 28 100.0 32 ............................ ACCGTAGTCTGATATTCTCTGTTATAACGTGA 861714 28 100.0 32 ............................ TGCATTAATCATTGCTGGATTGATGCCGTTTT 861654 28 100.0 32 ............................ AAAATCGAGCGGTTTTTTATTTTTAATTTCGA 861594 27 92.9 0 ....................A...-... | ========== ====== ====== ====== ============================ ================================= ================== 24 28 99.7 32 GTTCACTGCCGTGTAGGTAGTTTAGAAA # Left flank : AATCAGCTAGTGACAATAATAAAAGTTTATTTTTATCAATCAGTTCGGTAAATTTTATCTAGCGACATGAGCAATGAGCTGACAACTGAGTGAGGTTAGCATGACAAACAGGGATGTTTGGCAAGGCTGTGTTTTGTCAGGAACAAATACAGCCGATGCGTTAACAGCGAACGAAGGCGGAAGGCAGTCACATCGTGACCACTTGCGTGGTCGCCGCGGGAGTGGGTAAAGAGGGTTCTCACCAACCCTCTTAACTCGGACGTAATCGCCGTATAGGAATAGCCACCAAACAACAAAACGTCCGAAACTCAAAGAATAAAAAAATTTGAGGAACGGGGTTTTTGAAGACTAAAATCCATCCCATCACTAACCCTTTTTTTTGACTTAAGATAAAATATTTAAAAATCAATAGGTTGAAAAATGGCTCAAAAAAAGGGTTTTTTTTGGTAAAAATAGACTTTGCCTTTTTGCCAACAACATTTATAGTATATCGGGTTCTA # Right flank : TTAGTTAAAGTTATAACGCTCGAAATCCACCAAACTAGAAACGTTTAGCAAAGGAGTTTTTTAAGGTGAATAAACTTATCACATGCTATAATCGTTTTCACTCATAATTAAACTTTACACCTATTGTGAATAATAATTCAATTGACAACAAACTAAATGAAAAAATGGTGCTTATTTTCAAAGCACTCTCTGATCCAGTTAGAATTGAAATAATTAAATACTTAAAAAACATAAGAACTGAGGTCATTTGTGGTGAAATAGGCCAAGCGGTTGGTATCAGTAAACCTTCGGGAACTTATCATTTTAGGTTATTACAACAAGCTGAATTAATTAATGTAAGAAAAAGTGCTAGAGAAAAATATATAGGACTGAATAAATCAACATTTGATAAATATGTTACAGGCTTTTTTGATAGTCTTTAATATATTTAAATGTTGATTTAATCTTGAGTTTACTACTGGATGTTTATTAACTATTATAATTTGCGCCTTGTCGTTAAT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTGTAGGTAGTTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: R [matched GTTCACTGCCGTGTAGGTAGTTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-1.00,-6.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 85169-84902 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACFQC010000001.1 Gilliamella sp. B14384H2 NODE_1_length_953448_cov_196.728879, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 85168 28 100.0 32 ............................ TAACGCCTCACAAATAGTTGTAGTGGGCGTAG 85108 28 100.0 32 ............................ TTTTGGTATTTACTTAATTATGACCTTTTGGT 85048 28 100.0 32 ............................ TGAATTAGCCCAAACGCTCAGCGTTGCCCAAT 84988 28 100.0 31 ............................ AAAAAGATGGTCAGCTTTTTACGCCGTGTTA 84929 28 75.0 0 ......C....CA...T....CA.A... | ========== ====== ====== ====== ============================ ================================ ================== 5 28 95.0 32 GTTCACTGCCGAGTAGGTAGTTTAGAAA # Left flank : AAGCCAAGTATAGATTTAACGCAAGTATAAATACATATTATTTTGATGCTTTTTTATCGAAAATAAAAGTTTTTTAAATCTGTTTTTTACAAAATAATCATGATCAAATCATGCTCGCAATTTTTTATTTGATGATGATTGATATGACTTATCGTGGTTATATGGATATTAGAAAGAATGCATTCTCAAATAGAATTAATAAAGCCTGCATTATGAGCACTAGATTCGAGTTTTAAAGACTCTTTTTTACTCAATGTCGAACTAGCGCAAAATCAATTATTGAGCGAGAAACAGCGCATATTAAAGCAAAAAATATAATTGATAAATGGAATAATGTTTTGTCTGTAATTAGACAACATTAGTAAAACAACCCTTTTTTTACCGACACTTATAATTCATTTAAAATCAAACAATTATAAATTGGTGTGAAAAAAGGGTTTTTAGTTATAAATTGGTTATTATTCTTTTTCTGAACAAAGTTTATTGTGTATAATGTTCTT # Right flank : TTCTGTTGAAACACTTTATTAAAAATGTCTAACTCATGATTTAGGCATTTGTCACTTTTTGACTGCTGCAAAATGATGAAATTGGCATTTAAAAATTTGAGGAAAAGGGTTTTTAATAACCGCAAATTTAGCGAAAAAATTAAATGTTAATTCCGAAAAACAAAATTGTAACTTAAACTTGAACGCTTAAGCAGATCACTATATTATACGCGCCTTAAAATTCATCAATCAGCCAGATACTTGAAAGAGTCCTAATGTTAATTAATGCCAAAGATATTCTTGAAAAATTAAATCCACATAATAAAGTAAACTACGATTCAGTTTTGAAAGAGGTGATTGCTGATTGGCAGTTAGCATCAGCACGACCAAAGTTACTAATTCATAGTTGCTGTGCACCATGTAGTACTTATGTACTGGAGTATTTGGCTCAGTATGCAGATATTACTATTTATTTTGCTAATTCGAATATTCATCCGCGAGTAGAATATGAATATCGTAGT # Questionable array : NO Score: 5.81 # Score Detail : 1:0, 2:3, 3:0, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGAGTAGGTAGTTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.62%AT] # Reference repeat match prediction: R [matched GTTCACTGCCGTGTAGGTAGTTTAGAAA with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-1.00,-6.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 600667-600339 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACFQC010000001.1 Gilliamella sp. B14384H2 NODE_1_length_953448_cov_196.728879, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 600666 28 100.0 32 ............................ CATCGTGGATTGCAGTTTGGGTTGGTCAAAAT 600606 28 100.0 32 ............................ TGTGATAGGCGACTGCTCTTTCAGTTGGTGAT 600546 28 100.0 32 ............................ ATTGCTTGCTGAGCTTGTTGTAATGCATTTTG 600486 28 100.0 32 ............................ ACTAAAAAAACGTGTGCCCTTATTTTCATAAC 600426 28 100.0 32 ............................ GGACAATAGTAAATATGATTTAAACCTAACTC 600366 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 6 28 100.0 32 CTTCAAGGCTGCATAAGCCGTTTAGAAA # Left flank : CCGAAAAACGTTTAACCGCACAAGGTAAATGGTCAGCCGAGGTAAAAAACAAAATGGTTGAAAAATGGGGCAGCCTTCATTTGAACTATCCACACCTTCATTTTGCTAGCAAAAGCACTGGGCAACATTTTATTATGTGGCTGAAACAACAAAAATGTGCAACGGCTGTTGAAGGAACATTTAATAGTTACGGACTCAGCAAAACAGCAACTGTTCCTGATTTTTAACTAAATAATAAGGGCATTATTATAATGCCCTTAGCTGCCAATAATTAACAATATTAACGGTACAAATTTTGAGGAGCGTACTTTTTAAAGCTAAAAAATTTGAGGAAAGGGGTTTTTAAAACCTAAATACCATGCAGTGTTAACCCTTTTTTTTAACTAAAAATAAAATTTTTAAAAATCAATTAATTGAAAAGCCACCAAAAAAAAGGGTTTTTGCAAAGTAAAATAGTCTTTGCCTTTTGCACAACAATGTTTATAGTATTTGGGGTTCTA # Right flank : CAACTTATCAAACGCCCAAAGTTCAAGGCTGTAAAAGTGGAAAATTTTGAGGAGCGGGGTTTTTAAGACTAAAATCCATCCGATAAATCACTAAAATTAGTTATAACATCAGCTAGGGTCAATAATAAAAGTTTATTTTTATCAATTAGTTTAGTGCTTCTCATTTAGCGACATCAGCAATGTGCTGACAACTGAGTGAGATTAGCATGACAAACAGGGATGTTTGACAAGGCTGTTGTTTGTCAGAAACAAATCACAGCCGGTGCGTTAAGAGCGAACGAAGGCGGAAGGCAGTCACATCGTGACCACTTGCGTGGTCGCCGCGGGAGTTGGTAAAGAGGGTTCGCGTAAACCCTCTTTGCTCGGACGTAATCGTCGTATAGAACTAGCTACCAAATAAAAAAACGTCCGAAATCCACCGAATAAAAAAATTTGAGGAGTGGGGTTTTTAAAGCCTAAAATCTATCCGATAAATCACTAAAACCAGCTATAACATCAGC # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCAAGGCTGCATAAGCCGTTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.60,-6.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [56.7-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.64 Confidence: HIGH] # Array family : NA // Array 3 613735-612925 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACFQC010000001.1 Gilliamella sp. B14384H2 NODE_1_length_953448_cov_196.728879, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 613734 28 100.0 33 ............................ CGCCCGGGCACCACGTTCCTGATAGAGCGAGCC 613673 28 100.0 32 ............................ TTTTCGGAAAAGGGTTTATATCCGAAATGCGT 613613 28 100.0 32 ............................ TGAAATGGTTATAGATGCAAGAAACAAAGCGG 613553 28 100.0 32 ............................ CCGACGAGTTCGCAAATCTATTTTTATGTCAG 613493 28 100.0 32 ............................ TTGAGTACAACCGCTTAACAGCAGCAGGCAAA 613433 28 100.0 32 ............................ TCACGCAATCGAATATCCATGGGTTTTGATAG 613373 28 100.0 32 ............................ TTAATTAAAATATTAATAATATCTTCTGTAGT 613313 28 100.0 33 ............................ TGCTATTACTGGACAATTTAAGCTGTTTGTGTT 613252 28 100.0 32 ............................ GCAAGAAAAAGAAGATTTGAATAATCGCCTAG 613192 28 100.0 32 ............................ ATGATGTGCCTGCTGATACTTCAGGGATTGCG 613132 28 100.0 32 ............................ CGTATGAAATTCTGACCGCTATTTTTTGCCGC 613072 28 100.0 32 ............................ ATATAATTTTTACGTAATTTTGTAATATCGCC 613012 28 100.0 32 ............................ ATATTGTTGATAATTATTTATTAATGCATCGA 612952 28 85.7 0 ....................C....TGG | ========== ====== ====== ====== ============================ ================================= ================== 14 28 99.0 32 GTTCAACGCCGTATAGGTGGTTTAGAAA # Left flank : AGTACTCAATTTTACCTCTAATTTAGCAGGATTAATCTTCTTTATTGCTGGAGGTGAAGTGGTATGGTCAATTGGTTTAGTTATGTTAGTTGGCCAATTTATCGGCGCAAGATTAGGTGCAAAAATGGTTATTGCTAAAGGACGAAAATTAATAAGACCAATGTTAATTACCGTTTCTACCATTATGAGTGTCAAATTAATCTATGAAAACTTCTTTTAATCATTGCTAATAAAATTTAGAACCAGTTTTAGTACAATCAATAAGCTAACAACCAAGAATACATTAGCCAATTAAAAACCCCGTTCCTCAAAATTTTGAGGAACGGGTTTTTTGCATTTCCCAAAGTCTATATTTTAAATCAATAATAAACCCTTTTTTTTACATCAAAATTAATCTGATAAAAATCAGATAGTTGAAATTAACCGCAAAAAAAGGGTTTTTAATATCAAAATTGTCATTTACCTTTATTTGAACAATGATTATATTATATTGGTTTCTA # Right flank : TATTGCTAAATAAGCTAAAAAACTGAACTCATATGTTCAGTTTTTTTGTATACTAACTTTTTGTATTCACTCGATAAGAGAAAATATAGGCTATAACAGCAATAATGCCAAATATAAGAGATAGAAAAAACATTGTCTGATAGGCGCAATTTACTGAAATTATTTGATCTAGAGTTAGGTTGATTAATATTCCTGATAATACGCTTCCAAATGCACCTCCAATTTGCTGTATCACACGAGTGATAGCACTTGTATCCTTAATCTGATTTTTTTCACAAAACTCAAATGGAGAAGAGAGAACAGCAATCGTAGCAACACCTAATCCGGAGCCTCGAACAGTAAAACCGATGATTTCAGAGGCGTTTCCACCTACTTGAATTATTAATATACTTATTGCTGATATTATTAGACCTATACCAATAATTAGAAATGAATTTATCTCACTTAAAGATTTATAAATAAATTTTCTCGCCAACCAAGCTCCTACACCTTGTAAGGCA # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCAACGCCGTATAGGTGGTTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.40,-5.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-81.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //