Array 1 715516-712866 **** Predicted by CRISPRDetect 2.4 *** >NZ_QPAK01000017.1 Klebsiella pneumoniae strain JHTS012 tig00013305, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 715515 29 100.0 32 ............................. GAGCAGGCACCCGCCGCAACGACGAAGAGCGC 715454 29 100.0 32 ............................. AAATCAGCCAGCACCACGATTCTGGGAAATTT 715393 29 100.0 32 ............................. ACAGGCTTACCCGTATTGAGACGGTTGCTGAA 715332 29 100.0 33 ............................. GAAACCCCATCAGATGACCCTCCCCATGTTGGC 715270 29 100.0 32 ............................. TTGCCTGGTCTGCTTGGTGATGATCCGTGGTA 715209 29 100.0 32 ............................. TACAGAACGACTGAGGCGGCGTGTATTGCATA 715148 29 100.0 32 ............................. GATCTTAACTCTATTGCCAATGGCGCAATTCA 715087 29 100.0 32 ............................. GGCGATGCGCGCTCTGCTGGCTATCGGTAAAA 715026 29 100.0 32 ............................. AATGCAGCAACCGGCAAATATATCGCCGGTAA 714965 29 100.0 32 ............................. GGGCTGCCGCACGCCTGGGACGAGTCGAGCCC 714904 29 100.0 32 ............................. CCGCAATAACAAAAATAAATGAGGGTTAAAGT 714843 29 100.0 32 ............................. GTAAATGGGAATGAGTAGAAGAGCGTCATTGG 714782 29 100.0 32 ............................. CCCCCGCGCACATGCTTAAACGCGCTATCACG 714721 29 100.0 32 ............................. GGCATCTGTTGTGTAATGTTGAGTTTTTTTCA 714660 29 100.0 32 ............................. CAGGTTAAACATGTAAAAAATGACCGTCGCCG 714599 29 100.0 32 ............................. CACATTGCCCGGTCTGAAAAGTATTTGAAAAT 714538 29 100.0 32 ............................. TCCGCACAGTCAAACGCTCCAGACACCAACCC 714477 29 100.0 32 ............................. CCGGAACACCACCAGTAACAGCTACTGTAGGC 714416 29 100.0 32 ............................. TGACCCTGTTGATTTTGTTCCAGGTAATACGT 714355 29 100.0 32 ............................. TTAACCTCGTCGTTCTGGTTTCCGCCCAGGAT 714294 29 100.0 32 ............................. GAACCTGAATTCGAAGGGTGGGTCATCCTTCC 714233 29 100.0 32 ............................. GGACCCCGAGCGACCCGGTCACCCTCCGACCT 714172 29 100.0 32 ............................. CCGTCGAACGGCGGTTATATCCATCTTGAGTC 714111 29 100.0 32 ............................. ACCGATCCCACAATTGCGGCGGTTGAGATTGA 714050 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 713989 29 100.0 32 ............................. CCGATTGTCTGGCGGTCGAGCGCCATTTGCTC 713928 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 713867 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 713806 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 713745 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 713684 29 100.0 32 ............................. CCCTCCGCTTTCAGGGTGTGGCTGATATCACC 713623 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 713562 29 96.6 32 .............A............... TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 713501 29 100.0 32 ............................. ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 713440 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 713379 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 713318 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 713257 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 713196 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 713135 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 713074 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 713013 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 712952 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 712894 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 44 29 99.4 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCCTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : GTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //