Array 1 28095-28313 **** Predicted by CRISPRDetect 2.4 *** >NZ_LDTZ01000016.1 Gordonia jacobaea strain mv1 contig00004GJMV1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================= ========================================= ================== 28095 25 100.0 39 ......................... GGGGTGCAGCTCGACCAGCGGGGGGCAGCTCGGGCGGTG 28159 25 100.0 41 ......................... CGTTGGGGCTCGACCCGGCGGCGGGCGCTCGACCGGCGGTG 28225 25 96.0 39 .............G........... GGAGGGGCGCTCGACCAGCGAGAGGGTAGCTCGGCCGGC 28289 25 100.0 0 ......................... | ========== ====== ====== ====== ========================= ========================================= ================== 4 25 99.0 40 GGTGGTCTCGACAAGCTCGACCAGC # Left flank : GTCCTCGCCCTTGAGGAGTGCGATGACGGACTGGAGGTCGTCGCGCTTCTTGCTCGACACGCGTAGTTCGTCGCCCTGAATCTGAGCCTTGACGCCCTTGGGGCCCTCGTCGCGGATCTTCTTGGAGATCTTCTTGGCGTGCTCGGAGTCGATGCCCTGCACGAGGTTGCCCGAGATCTTGTAGGTCTTGCCCGACGACTGGACCTCGCCGGCGTCGAACGCCTTGAGCGAGATGTCGCGGCGGATCAGCTTTTCCTTGAACACATCGAGAGCTGCCTGGGCGCGCTCTTCGGCGTCGGAGGTGATGACGATCGTCTCTTCGCCGGACCAGTCGATGCCGGTGTTGGTGCCGCGGAAGTCGTAGCGCTGCGAGAGTTCCTTCGCGGCCTGGTTGAGGGCGTTATCGACCTCCTGGCGGTCGATCTTGCTCACCACGTCGAACGATGAATCAGCCATGGATCACAGCGTAGCCCGACGCCGCTCGGGCCCGGGGCGAGTGG # Right flank : CGAGGAGCAGCTCGACCAGCCGTAGGGCGTCGGGCTGACCTGCGGGTTTGCGTCGAAGACAGGGGTTCGTTGTATTCTTCTCGGCGTTGTTCTTACGGTCGTGAAGGTCGTGGGAAACAGCACGGCAGATTGCCCGAGCGGCCAATGGGAGCGGACTGTAAATCCGTCGCGAAAGCTACGCAGGTTCGAATCCTGCATCTGCCACAACGAGGTGAACGTCTGGTCGGCGGTCCATCGGAGAGCTGTGAAAGCAGCGATTTGGTGAGCCGCCGCATCGGTGTGTAACCTCGTTAAGGCTCTCCGGACGCCCGCAAGGGCTGCCGGAAACGCCCCCTTAGCTCAGTCGGCAGAGCGTTTCCATGGTAAGGAAAAGGTCGACGGTTCGATTCCGTCAGGGGGCTCGGTAGGACTTGAACGCCCGACGCCGCAACGCCACCGCGAGGACTGCGTCCACGCTGACGGCGTTCATGTCACCATGGCGGTGTAGCTCAGCTGGTTAG # Questionable array : NO Score: 2.81 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGTGGTCTCGACAAGCTCGACCAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.90,-2.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [31.7-33.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA //