Array 1 6112-5158 **** Predicted by CRISPRDetect 2.4 *** >NZ_RCYH01000017.1 Eubacterium ramulus strain aa_0143 Scaffold_0017, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 6111 36 100.0 29 .................................... TGAGATGCTGCACTACGTAATGAGCATAG 6046 36 100.0 30 .................................... ATGAGGAAATTATGAAGAAATTTATAATTG 5980 36 100.0 29 .................................... TTTGGCCTTTTCTCGGACCTGGAAGCAGC 5915 36 100.0 30 .................................... TAAAAAATAACTTCATTTCCTCTTTTGATT 5849 36 100.0 30 .................................... AAACTATCCAGAAATAAGGATCATCATAAG 5783 36 100.0 30 .................................... TTTATATGGATTAAGACCAACTACTCCGAT 5717 36 100.0 30 .................................... ATCTTTGCATCTGACAGTCGCAGGAGTGCC 5651 36 100.0 29 .................................... TCGGTTGACATGTACAAGATCAATGCCCC 5586 36 100.0 30 .................................... CTATATGAGACGCACAAAAGAGCAATTAAC 5520 36 100.0 29 .................................... TTTACGTTTCACGGTTGGTTCAACCACCT 5455 36 97.2 30 .............A...................... TGAGATCATTTTTAAAAATGAAACCTTTTC 5389 36 100.0 30 .................................... CAAAATATGGATGTGTTGAAGGAAACAAGG 5323 36 100.0 29 .................................... TCTTGAATAGCTTATAAGATAAAGATATA 5258 36 97.2 29 ..............................T..... ACCACGTCCATCTTCCGGTCCTGCATCTA 5193 36 91.7 0 .C.........................A..T..... | ========== ====== ====== ====== ==================================== ============================== ================== 15 36 99.1 30 GTTTGAGAACCTTGTAAGTTTGTAATGGTGCAAAAC # Left flank : AATAAGAAAATACTGGGTAAGTTGTTTCAGGAATTGAAAACTGTTTCGATGGAAGAGCAGTATGCAGAAATATGTGAATTGAATGCTAAAGTTGTTCATTATTTGGATGATTTAAATTTAAAAATGCCATATCCGATTCAATTTCGACTGGAGTTAGATGTACTTGATCTTTATAAAATATATGGGGTTCAGTTGGATACAGAAGAAAGTGATATGTTTGAACGGCTCTTGGAGTATGTCAAAGTACTGAAATCATTGTGTGGAATTCGCTTGCTGGTATTTATAAATGTGAAAAATTATTTGTCAGAAATGCAGATAAAAGAATTGTACAAAACAGCATTTTATTATAAAATAAATTTATTATTAGTTGAGGCACATCAAGGGAAAAATTTAGAATGTGAAAAAAATCAATTAATAGATGAAGACATGTGTTTTATACATTACTAGGTGGCTTACGCATATTGACCGATATGTTCGGTTCGGTGATGATCTCATTTGAG # Right flank : GTTTATGAGAAAATCATAACCGTAGACACTGTTTGAGAAGCAATGTTTTCTCGGCTGGTAAAATAGCTTTCCGAAAAAGAGGGCGTAACGGAAGCCCTCAAAGCGGAAAATCAAATGCTGTGGGTGCAGAGGATGAACAACATTCGCAGTGTTACTATGGAAATCGTTTTGAGTGAGCTTATATACTGTTAATACTATGCAAGAAAAGTCGCTGTCAACAGACGGCGGCTTTTCCTTTTCGGGTAGTATTCAAGAAGTCATAAAGTTCTGTGAGTAATGGAAGAAGCCGGCGTTTGCGGAAAAGTCACAATTTACGGAGGTAAAGCTTCAAATACACTTGCCTTTTTGTTCTTACTATGATATTATTAGTACACATACTAAAACATTTGATGGGAGGTGATGTATTTGCGGAGAGATAGCAGTGAAACAAAGAGGAAAATACTGACCGTGTGCGTCCGTCTCTTTTTGGAGCAAGGGTATAAAAACACCTCTGTCAGTCA # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGAGAACCTTGTAAGTTTGTAATGGTGCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.20,-1.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 1 91573-92009 **** Predicted by CRISPRDetect 2.4 *** >NZ_RCYH01000007.1 Eubacterium ramulus strain aa_0143 Scaffold_0007, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================== =========================================== ================== 91573 26 100.0 43 .......................... GCTGTCGTATACCAGTCCTGTGTAACCGAAGTTTACAGCACCG 91642 26 100.0 43 .......................... GCTGTCATTGTACAGTCCTGTGTAACCAAAGTTAATCTGGCTG 91711 26 96.2 43 .....................T.... ACTGTCATATACCAGTCCTGTGCGTACAAATGTGATGGTGCTG 91780 26 84.6 40 ..T..................T.C.C ATTTGCTGTCAGACCAGTGTATGCAAATGTGATGGTTCCA 91846 26 100.0 43 .......................... CTTGTCATTGTACAGACCTGTGTAACCAAAATTGATATTGCCA 91915 26 96.2 43 .....................T.... GCTGTCATATACCAGACCTGTGTAGCCATAGTCGATGGTTCCG 91984 26 69.2 0 CCAA.C...............T.C.C | ========== ====== ====== ====== ========================== =========================================== ================== 7 26 92.3 43 TTCTCTACATACCACCAGCCACAGTT # Left flank : GTTCTGCCTGATTGGCGGAATCACCTGCATTAATATTTGCATTTCCGATATTCGCCAACTGATCCATGTCCATATCCAGCGTAGAGGAAAGCAGATACATCCGTGATGCATCCGCACGGTTCCTGTCCATGGGATTTTCCGGGGCTGTCTTTCCAAAAGAAATCATCAGCGCCAGAAACAGAGCCACAATTCCGGCTCCCGCCAGTGCTCCTCTTATTTTCTTTTTATTTTTTCTGTTTCTACTTCCCGGTCTGTTCATGAAATTCCCCTGTTTTTTTGACAAAAGCAGGTTTGTTCCGGCTGCAAAGTCCGAAACAAACCTGTTTTTTACTTCCTTGTGTCCATCTAAATGATGTGTATGCAATAATTGTCAGATAATTATTCGCAATCTGCCAACGCTACTTGCTTATTCACGTTAGAATCTGACTGCTCCTCCAACTACATTCCATACACCGTATGCATTTCTTACAGTTCCTGTATACCCAAAGTTGATGGCACCG # Right flank : CACACTCAGCGAGCCCTGTGTAATCAAAATCTACCGCACCGTCTTTGATGTACCACCAGCCGCATACACTGTCATTGTACAGACCTGTGTACTCAGCATCTACTTTGCCGGCTTTGACATAATGCCATCCGTAAACAGCATCGTTGTAAAGTCCGTTGTAAGTAGTATCTACTTCACCGTCTTTTAAGTAATAGAGACCGTCTTCTCTCTCCTGAAGACCTGTAAACTCTCTTGCTTTATCTCTGGTTGTTACATGTGCAGTCAGATCAACCGGAGCTGTGCTCTCATTGCCGTCCGTGAAATACAGACCTTTGATCGCTACTTCTACCGGATCATCTACATATTTTAATACTTTAAATTTTAATGCAAACGTTGCTTCCGAGAAGGTAGTATCTTTTGCAGATGTCAGGTAAGAGAAATTTCCTCCCGCAGTGGATACCATCGCTTTCTCCGGAAGATCTTTTTTCTCAAGTCCCTCAAATTCCAGTACAGTTTCATCG # Questionable array : NO Score: 2.72 # Score Detail : 1:0, 2:0, 3:0, 4:0.61, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.85, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTCTCTACATACCACCAGCCACAGTT # Alternate repeat : TTCTCTACATACCACCAGCCATAGTT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.85%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-13] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //