Array 1 70355-73004 **** Predicted by CRISPRDetect 2.4 *** >NZ_VAAI01000011.1 Klebsiella pneumoniae strain CRE863 863K2015_contig000011, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 70355 29 100.0 32 ............................. GAGCAGGCACCCGCCGCAACGACGAAGAGCGC 70416 29 100.0 32 ............................. AAATCAGCCAGCACCACGATTCTGGGAAATTT 70477 29 100.0 32 ............................. ACAGGCTTACCCGTATTGAGACGGTTGCTGAA 70538 29 100.0 33 ............................. GAAACCCCATCAGATGACCCTCCCCATGTTGGC 70600 29 100.0 32 ............................. TTGCCTGGTCTGCTTGGTGATGATCCGTGGTA 70661 29 100.0 32 ............................. TACAGAACGACTGAGGCGGCGTGTATTGCATA 70722 29 100.0 32 ............................. GATCTTAACTCTATTGCCAATGGCGCAATTCA 70783 29 100.0 32 ............................. GGCGATGCGCGCTCTGCTGGCTATCGGTAAAA 70844 29 100.0 32 ............................. AATGCAGCAACCGGCAAATATATCGCCGGTAA 70905 29 100.0 32 ............................. GGGCTGCCGCACGCCTGGGACGAGTCGAGCCC 70966 29 100.0 32 ............................. CCGCAATAACAAAAATAAATGAGGGTTAAAGT 71027 29 100.0 32 ............................. GTAAATGGGAATGAGTAGAAGAGCGTCATTGG 71088 29 100.0 32 ............................. CCCCCGCGCACATGCTTAAACGCGCTATCACG 71149 29 100.0 32 ............................. GGCATCTGTTGTGTAATGTTGAGTTTTTTTCA 71210 29 100.0 32 ............................. CAGGTTAAACATGTAAAAAATGACCGTCGCCG 71271 29 100.0 32 ............................. CACATTGCCCGGTCTGAAAAGTATTTGAAAAT 71332 29 100.0 32 ............................. TCCGCACAGTCAAACGCTCCAGACACCAACCC 71393 29 100.0 32 ............................. CCGGAACACCACCAGTAACAGCTACTGTAGGC 71454 29 100.0 32 ............................. TGACCCTGTTGATTTTGTTCCAGGTAATACGT 71515 29 100.0 32 ............................. TTAACCTCGTCGTTCTGGTTTCCGCCCAGGAT 71576 29 100.0 32 ............................. GAACCTGAATTCGAAGGGTGGGTCATCCTTCC 71637 29 100.0 32 ............................. GGACCCCGAGCGACCCGGTCACCCTCCGACCT 71698 29 100.0 32 ............................. CCGTCGAACGGCGGTTATATCCATCTTGAGTC 71759 29 100.0 32 ............................. ACCGATCCCACAATTGCGGCGGTTGAGATTGA 71820 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 71881 29 100.0 32 ............................. CCGATTGTCTGGCGGTCGAGCGCCATTTGCTC 71942 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 72003 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 72064 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 72125 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 72186 29 100.0 32 ............................. CCCTCCGCTTTCAGGGTGTGGCTGATATCACC 72247 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 72308 29 96.6 32 .............A............... TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 72369 29 100.0 32 ............................. ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 72430 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 72491 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 72552 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 72613 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 72674 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 72735 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 72796 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 72857 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 72918 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 72976 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 44 29 99.4 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCCTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : CGTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //