Array 1 849933-853987 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP048711.1 Kineobactrum salinum strain M2 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 849933 29 100.0 32 ............................. CCGACTTTGGCGGTCAGGCCCAGCTTTTTATC 849994 29 100.0 32 ............................. CATCGCCGCCGCGGCTATTACGCCGGCATGTG 850055 29 100.0 32 ............................. CGAAAACCGCGCTATACGCTGACACCGGGCAT 850116 29 100.0 33 ............................. CCTGGCTGGGCATTCCACAAAACCCGCGAGTAC 850178 29 100.0 32 ............................. TCAACGCAAGGAGGGCAGCATGATCGACACAC 850239 29 100.0 32 ............................. TGCTCGGCGTAGGTGTAGCCCTTATCCCTCAA 850300 29 100.0 33 ............................. GCATCGGCGGATGCCGCCGGGACAGCCACCGAC 850362 29 100.0 32 ............................. CGGGAGCTTGAGCTGTGAACTCCCCCCGCCAA 850423 29 100.0 32 ............................. TGATAACATCGTGGCCACTGGCTGGCTCAATT 850484 29 100.0 32 ............................. CGGGGAAAGCAGCTCCCACCATCCCTGCACGA 850545 29 100.0 32 ............................. TACAGCATGGCGGTGGATTTTCGCCTGCTGAA 850606 29 100.0 32 ............................. CCCGGGAGGCGGCCGCTGCTGCCGAGATTGAG 850667 29 100.0 32 ............................. CTAAACTTAACCCACTCTGTTACGGGGCGGGC 850728 29 100.0 32 ............................. GATGCCGAGTTTTGAGGGCGTGGCCGCCGGTG 850789 29 100.0 32 ............................. GAGAACCCGCCCATGCACATACCGCCGCACAT 850850 29 100.0 32 ............................. TGATCCGGCATGAAGTCGGCCGCCAGTCCCGC 850911 29 100.0 32 ............................. CATTTCGACAGAGATGAATGCCGTGGTCGCCC 850972 29 100.0 32 ............................. CCAACAACACCCGACCGCGATCTGGCAAAAGC 851033 29 100.0 32 ............................. TCAGCGATTAAGCAATCACACCAGGAGACGAA 851094 29 100.0 32 ............................. CCATTACGCGGATCTCCCGTGATTGGGGTGGT 851155 29 100.0 32 ............................. TATTGGATCGCGTCCTGCTGCGACGGCGGCCA 851216 29 100.0 32 ............................. CTGACATCGGCCGCATGCGCGGAGGTGGACGC 851277 29 100.0 32 ............................. CCGCCAGCAAATGGATGGACGAGCTCATCGAG 851338 29 100.0 32 ............................. CCTGCCGGATAACATCGAGCGCCGCACCGGCT 851399 29 100.0 32 ............................. ATTATTCAGAATGCCAAGCGCCTATTCCCCAT 851460 29 100.0 32 ............................. TGGTGGCCTGATTCATTCACGAATATGTGGCC 851521 28 96.6 32 ........-.................... TTTAATGTCAAGGCACACCTAACTTATTTTGA 851581 29 100.0 32 ............................. TGTGTAGGAGGTCCGCTTGATCAGCGGGCCTA 851642 29 100.0 32 ............................. TTTCGCTTCCTGCTCGGCTTCGTGCCCCTGAA 851703 29 100.0 32 ............................. TCATACAACTCCGGCCTCGCCTCAATATTCGC 851764 29 100.0 32 ............................. TATGTACCACTTTAGCCAATTCGATAAATGTC 851825 29 100.0 32 ............................. GCTGATAACCAAACTCCCGGACGTGCCTAATC 851886 29 100.0 32 ............................. GAGTCAGTATGAACATCTATGAAAAGTTTGTT 851947 29 100.0 32 ............................. TCGCGCATCGTCTCCACTTGCTCAACCCAGCC 852008 29 100.0 33 ............................. GCTTCCCGATCCAGTAATTACCCGTGTTGCGGC 852070 29 100.0 32 ............................. CTGGCCGACCGAGCCGAATGTAGCTGTGCCCC 852131 29 100.0 32 ............................. TATTTCCTAATTGTGGGGCAGACGAAGGAACA 852192 29 96.6 31 ............................A ACTGGGGCGGTGCGCGTCTCCCGCTGGGCAC 852252 29 100.0 32 ............................. GCATCGACGTTCTGCCCCATACCCACCGCTGC 852313 29 100.0 32 ............................. CTCGTTGACTATGTGTTTGGCCGTTCAGTGGG 852374 29 100.0 32 ............................. TAGGCGGCCCTAGTACAACAAGGTGTGGAGGT 852435 29 100.0 32 ............................. CCCACCTCCGATGCCGCCGCCCTGGCAGAGAA 852496 29 100.0 32 ............................. TAATAAACATTAATCAAATCATCCTTTTCCCC 852557 29 100.0 32 ............................. TTCGGCCGCGGTCGCCGGAAATGGATCGATCA 852618 29 100.0 32 ............................. CTCGTTGTGAGACTGGGTGTAAAAGATACCGC 852679 29 100.0 32 ............................. AGTCCTGAAGAGGTGCGAGGATTCTACAATGA 852740 29 100.0 32 ............................. TGACCACCGGGCCTTGCCGCAACACGCTGACC 852801 29 100.0 32 ............................. GCATTAGTGGCATGTAATATCGGGTTACCGCC 852862 29 100.0 32 ............................. CCATTGATCTTGGAGCACCTGTAGATATTGGC 852923 29 100.0 32 ............................. GCTGAGCTCAATGACGCCATGCTCGTTCTGGT 852984 29 100.0 32 ............................. CTGAAGCCGTGCCAGGCGGTGCAGTCGGGCAT 853045 29 100.0 32 ............................. CGATGAGTGACCTTGCAAAATATGGCCTGCAA 853106 29 100.0 32 ............................. GGCCGCAACGGGGCGCTGTATCTCGCGGGGCC 853167 29 100.0 32 ............................. CTGGTATCCAACGGCATGGCGGAGAAGCAGGC 853228 29 100.0 32 ............................. CACGTCCGCGAATTCGGCTATCAGCCTGCCGC 853289 29 100.0 32 ............................. GTCTCGCGGCTCTCAATGTCCATGTCGCCTGC 853350 29 100.0 32 ............................. GGCACGCCAGACAACCCCGTTTTTTATGTAAC 853411 29 100.0 32 ............................. CGTCCATCTCCGCATCGATCACCTCCTCGATC 853472 29 100.0 32 ............................. GTATTCGCACCGCGCGGACCGTCCAGCATTTC 853533 29 100.0 31 ............................. CTGGTGCGGTTGGGCCCTTGGCTCCGCTGCC 853593 29 100.0 32 ............................. TCGGCACTCCCGACGCGGTATCCAGCCTCCAG 853654 29 96.6 32 .............T............... CAGCAGGCTTTCGAACATGAGGGCATCGCCGA 853715 29 100.0 32 ............................. CCGAGTATGAGGCGCTGGAAACGCGCGCGGGT 853776 29 100.0 32 ............................. TGGACTGTCACGCCGCATCCTCCCGCTGCTCA 853837 29 100.0 32 ............................. ATTACGCGCGCCGCGCTGGTGGCACAGCTGCC 853898 29 96.6 32 .......................A..... CTGGTTACAGTGTATGACCGGAACCGGTACGT 853959 29 86.2 0 .................A.A......TT. | ========== ====== ====== ====== ============================= ================================= ================== 67 29 99.6 32 CTGTTCCCCGCGGGTGCGGGGATGAACCG # Left flank : GTATTGGCCGCGGGAGAAATCCAACCGCCACCGATGCCAGAAGACTCACAGCCACCGGCCATTCCCGAACCAGAATCCATCGGCGACGTCGGGCACAGGAGCGAATAAATGACGATGCTTACCGTTGTGACGGAAGCTGTTCCGCCTCGGCTGCGGGGACGACTGGCTGTTTGGTTGCTGGAAGTTAGGGCGGGCGTGTATATAGGCAACGTCTCTCGAAAGGTCCGTGAAATGATCTGGGAACAGATCAATGCCTTGGCGGAGGATGGTAACGTTGTTATGGCTTGGGCCACGAATACGGAGTCTGGTTACGACTTTCAAACCTACGGCACCAACCGTCGCATGCCCATTGATGAGGATGGGCTACGGTTTGTCCGATTTCTCCCTGAGCCCTTCAATAAGCCTTGAGGGTTGTTTTTTAACAAGTTGGTATTGGCCAAATAAATGGTGGATTTTTGGGACTGGAAAAAGTCCATTAAAATCAATGGCATGATTTAAGA # Right flank : GGCCAACAATCACATCGCCCAGGCGGCGGTAGGACATGATGTGCACGGTAAACCAGAGACTGTCTCCGCGAGAGCCCGTTTCTCGGAAAATGTCAGGATGCACGGGCTTTCCTGTGTAGCCCTTTCGCAGTGGTCGCGGGATGAAACGCCCCGGCACTGCCAGCTCCCATCCATCAAAACAGTCCAATACATTGCCATTCCAGATCAAAGCCCTACACTTAATACTGTACAAATACACAGCACCAGGAAGACAGCCCCATGACCAATCTCGCCTTCCCTCCCATCCCCGTCGACTTTGACACCGACCATCTCGCCAACGAAATCACACTTCTCGCCGGCCAGATCAATGCCGCCAACCATCGGCTGCTCAAACTCATCGCCCAATTCGACCAACGCAAGGGCTGGAGTGGTGGCGGCACCGTGCGCTCCTGCGCCCACTGGCTGAACTGGAAATGTGGCATTGCATTGAGCGCCGCGCGGGAGAAAGTGCGGGTGGCGGG # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGTTCCCCGCGGGTGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGTGTGCGGGGATGAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //