Array 1 216870-215786 **** Predicted by CRISPRDetect 2.4 *** >NZ_RJJR01000011.1 Ferruginibacter sp. BO-59 contig_11, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 216869 30 100.0 36 .............................. TTAATTGTGAGATTCTTCAGAACTTGGCTACCGGGT 216803 30 100.0 36 .............................. GGATTAACATCAATTGTATCTGCAAAGTCAGCCGTT 216737 30 100.0 37 .............................. AAAAATAATAAAACCAAACTGGATGCATCAAAATTTA 216670 30 100.0 35 .............................. CAATTTATTTCAAAAACGATTGGCAAAAGCGATAT 216605 30 100.0 36 .............................. ACAACAAATACAGCATATCCACCCTTCACAAGTTTG 216539 30 100.0 34 .............................. TACCCTATGCCCGTACTGATTTGCTTTGTCAGAG 216475 30 100.0 34 .............................. AAAGAAAAAACAGGGTATGAATGTGCCATGTGGT 216411 30 100.0 37 .............................. CTGATATTCTCAGCGGCGTAAATGGCACATTCCGTTA 216344 30 100.0 35 .............................. GATTATACCACAATTTGAAAAGCAAGACCTTGCGG 216279 30 96.7 37 ...........................G.. CAGATACACGCCCCGAATTACTTAAACCGTTATCATC 216212 30 96.7 34 ...........................G.. ATTGTTGCAGCTACCCTTGTGGCACCGATGCCCT 216148 30 96.7 37 ...........................G.. TCTGCCAATGCTTTTACATTCTCAGCGTCAAACTTGA 216081 30 96.7 34 ...........................G.. TTCATACTTTTATCGTCGGCATTTCTGTAATTGT 216017 30 96.7 38 ...........................G.. GGATTATCACATACACCAGCACTATGGCGCCGACTGCT 215949 30 96.7 37 ...........................G.. AAGTAGGAATACCGGTTATTTGTTGGCTTACTGATTC 215882 30 96.7 37 ...........................G.. TTTTTAAAACCTTTTATTTCAAAGAAGCCCCAATCGT 215815 30 96.7 0 ...........................G.. | ========== ====== ====== ====== ============================== ====================================== ================== 17 30 98.4 36 CTTTTAATCGCACCATAGAGGAATTGAAAT # Left flank : ATAAAATTGAAGAACTGCTGCCGCAAAACTGGAAACCACTGGTATAAGGATTTTATTTTAAATTAATTTCGATGTGGTTGGTCGGAGGGATACTTTGCAATAGCTTCGAGCGGATTTTGTTCGATCCAAA # Right flank : GGTGTTTTTACATATCTAGTTCTGTTTTAATCGCCCAAAATGTTCAGATAATTCACAACCAATAGTAAACGGTAATTCCATCCCCCTGATAATTCGTATAAAAAAAATAAGCGAGTTCAATCCATAGCCTTAATCCAATATTTCTGATTTTTTTTCGTTTAATTATTAACCGTTTTTTGCCCATTTCAAAGAACAATCCAATTTTATGAAAACCTTTTTGAAACAAAAATTGAAAAGCCTGCGTAAGAACATTCTTTACGGAATGTCTTTTTGCTTTTTTGTGCTGTTGTTTTTTATTCTTCTTCTTTTCCAGAGTGCCGGTCCGGTACAGCATATTTTAATCGCCATCGCGGGCGCTCTTGTGGCTTTCGTATTCGTATTGTTTTTCCTTTTTAAAATTGATCTGGACAGGGCATCTGGCAAAATTGCAAAAAATGACCTGGCTGCTAATGAATTAAAATACAGAAATCTGATTGAAAATGCAGGCATCGTTATGTACA # Questionable array : NO Score: 9.07 # Score Detail : 1:0, 2:3, 3:3, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.89, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTTAATCGCACCATAGAGGAATTGAAAT # Alternate repeat : CTTTTAATCGCACCATAGAGGAATTGAGAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.40,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: R [0-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.91 Confidence: HIGH] # Array family : NA // Array 1 232936-237262 **** Predicted by CRISPRDetect 2.4 *** >NZ_RJJR01000007.1 Ferruginibacter sp. BO-59 contig_7, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 232936 30 100.0 35 .............................. GCGATAACTTACATCGCCTTCTTTTTCTTCTTTTT 233001 30 100.0 36 .............................. TAAATGATTCTTGTTGGTATGAATCAAAGAGCGATA 233067 30 100.0 37 .............................. ATATGTACGCGATGCTTTTTAATCTTTTCGGCGAGAG 233134 30 100.0 36 .............................. CTAAATAGTAATTAATTAATCAAAATAAAAACAAAA 233200 30 100.0 35 .............................. GGAAAAACAACGCCGCAATGATTCCTATTACTGGT 233265 30 100.0 35 .............................. GACTTAGACAATTCGATTTCAATTTGTTCTTTTAA 233330 30 100.0 35 .............................. TAAACAAGATTGTAAAATTCAAACAAGAACAAAAA 233395 30 100.0 36 .............................. CTTGCATGTACAGGTGTGGAGTAAATCGTTGTTGAA 233461 30 100.0 36 .............................. TGCTATCTCTCTGTAATTGTGTTAACCTATTTGGTA 233527 30 100.0 36 .............................. GTTATGATGGAACGTTTTCTCCCATTGCGATTTCTG 233593 30 100.0 37 .............................. TTCTCATCTGCAATCATTGAATGATAAAACAGACAAA 233660 30 100.0 35 .............................. GGTGAAACGTATCGCCTTTAATTCTTAGGCATCCA 233725 30 100.0 37 .............................. ACTGATAGAAAAGTTATCAGTACAACAGGAACTATTT 233792 30 100.0 35 .............................. ACAAAACCGCATCGTCAATTGATGTTTTACTTTTA 233857 30 100.0 36 .............................. AACGTTCCTTGCTTGATGTCGTTTTTTGTTTCCTGG 233923 30 100.0 36 .............................. ATAAATAAATTAAAAACCCCACCATGGCAAGCAAGA 233989 30 100.0 34 .............................. ATGATGTAGTGCGTGCGCTGATAAACTCTGCGTT 234053 30 100.0 34 .............................. ATCTAAGTGCGTTGTTAGTATTGTATGGTTGAAA 234117 30 100.0 38 .............................. AAACATACATGATAGAATGGCAGGTGGATATTATCCCG 234185 30 100.0 37 .............................. ATACGATTAAGGTCGGTTATGCTAACCAGGATTACGA 234252 30 100.0 35 .............................. GGGTAACTTTTGTACGGACGTAACCACCATACCGG 234317 30 100.0 35 .............................. ACAGGTAGTCATAATATACCGTTACGATGATGAAA 234382 30 100.0 37 .............................. TGGGCTGATTCGCGTTGCGCTTCAAAGGTCAGCCCGG 234449 30 100.0 35 .............................. CCCCCCGCCATGTCTGAAACCTTCTCAGCTCTTTA 234514 30 96.7 36 ...................C.......... TGCGTACTTATCCGGACTAAGTGCTTTGACTGGACT 234580 30 100.0 37 .............................. AATGGAGAAGCCCAATTAACAAACCTGTTTTTATCTA 234647 30 100.0 37 .............................. GTGCAAACACTCGGCAATAAAGGGAGCATTATTAAGG 234714 30 100.0 36 .............................. AAGTAAAATCGTGGAGTACAGGTAATCCAACAGGTG 234780 30 100.0 36 .............................. ATAGTTCATACCTACAAACTAATAGAAAAGATGGAA 234846 30 100.0 34 .............................. GAAAGTACAAGGTCGCCGATTGAGGGAATTGCAA 234910 30 100.0 38 .............................. GGGTTTGAAAATTTTTATTTTCATTTTTTGAGTTTTAA 234978 30 100.0 36 .............................. AATCTTCCCTTTTGTGGCTTTATCCTGCTCTGATTT 235044 30 100.0 35 .............................. CGATAGGAGCAGCTTATCCTTATGGTTATGGGAAT 235109 30 100.0 36 .............................. TTAAAATTTTAACCCTTAGAAATATTGAAAACGAAG 235175 30 100.0 37 .............................. TCGCTTATTTGCTCCTTAATCCTTAGAAAAAGTGGCA 235242 30 100.0 38 .............................. TCATTAGTTAAGAATTTACCACCGTTTCCAGTCATAGA 235310 30 100.0 39 .............................. CTAAATATGCGTGTAATACCTGCCCGTCCTGTGCTGAAT 235379 30 100.0 37 .............................. AATAACGAGGCGCAAGTAGATTATTCCCATCGTTTAT 235446 30 100.0 36 .............................. ATGCTTTTGCATCGGATATTGCCGCAGTATATAATG 235512 30 100.0 36 .............................. TATGGGGCTGCTATCTTGTAGGGATTGGATTCAGTA 235578 30 100.0 35 .............................. TATCTTGTATTTTTTTTAATCTTTCATCCCATTTG 235643 30 100.0 36 .............................. AAATCAAAAAGACCAAATTGATATTGACAAGAATGA 235709 30 100.0 36 .............................. GATTTGTCATAAACTCCTCCGGGATTGTAATAGTAT 235775 30 100.0 37 .............................. GGTATCTTCCATCTTTTAGTTCCTCAAACGCTTTCCT 235842 30 100.0 35 .............................. TGATTGCTACCTTAATCAAACCGGAAGGGGTGAAG 235907 30 100.0 36 .............................. GGGAACAAGATTGATGTGCCGCTAAATAGTAATTAA 235973 30 100.0 37 .............................. TTTTTAATTGCATAAGGCCCATGAAAAGACCTCCTAC 236040 30 100.0 39 .............................. TCTGCTAAGGTTTCGGCAACTGTAAAAACCGTACTACCA 236109 30 100.0 34 .............................. TGAGAAAGAACTACTGTTGTCCCTTTTACTTCCA 236173 30 100.0 38 .............................. AACGCTAAACATAAAAGAAACACTTGAATTGATGTGAA 236241 30 100.0 36 .............................. GTTGTAAACAACAAGGCCGATATTTCTGAATTAGGA 236307 30 100.0 37 .............................. GGCAGAAGCCAACGGACAGAGATTAAGCATAAAAGCA 236374 30 100.0 35 .............................. TGAAAAGGCCCCCTACCGTGAAAAGACCACCTATG 236439 30 100.0 36 .............................. TTGGATGTTAAAATAGAGAATCGTTCAAAAAGATTT 236505 30 100.0 39 .............................. AACAGAAGCCGCGTTAAAAGCAAATCAGGCAGCGCAAAA 236574 30 100.0 37 .............................. GGAAGAGGTAAGGAAGGGAAAATGAAGTATGAAAAAA 236641 30 100.0 36 .............................. CAGTAAAGCCCCACCTTAAATTTCATTACGTTACTT 236707 30 100.0 36 .............................. AACTAAGCCTTGTAGAATGGATATTGTCAAGGCCGG 236773 30 100.0 37 .............................. TTTTTTTAACACGAAGAATATAATCCGAAACTGATAA 236840 30 100.0 35 .............................. TCACCTGCCAGTAATTCCATTTTTTTAACACGAAG 236905 30 100.0 35 .............................. TATACAACGGATGAAATTACTGCACCTGAATACAT 236970 30 100.0 37 .............................. TTATTACGGATAATACTGTGGATTTTGGTGGGCACAA 237037 30 100.0 36 .............................. GGGAGTACGCTTCAGGCGCCGCGTATGAAGGCAGGA 237103 30 100.0 36 .............................. TGCTTTGCTATTCCTAAAAAGAGCAATACTTTTTTA 237169 30 100.0 34 .............................. TACAATGAATATCTGTTTTGGTTAGGCCTTTTTC 237233 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================= ================== 66 30 100.0 36 CTTTTAATCGCACCATAGAGGAATTGAAAT # Left flank : CGGAAAGGATTATTATCTTTAAAAAATGTATGTGATTTTGGTTTACGATGTGGATACAAAAAGAGTTGGTAAAATGCTGAAGCTCTGCCGGCGGTATTTAAACTGGATTCAGAACAGCGTGTTTGAGGGAGAGCTAACGGAAGTGAAATTGAAAGAACTTATCATTGAAGCAAAGGAAATTATGAAAATCGAATCGGACAGCCTGATTATCTTTAGCAGCCGCCAGGAAAAATGGTTAGAGAAACAAGTTATCGGAAAAGAGAAAAATGAGATTGATAACATGCTTTAAGTTGTCGAAGTCCTTGAGAAAAGGTCTTCAGAAGCAGAAAGTTCTTTGACATTATGGAGTAAAGACCTGAGCATCAGCGCAAATCTGTTATTGTCGAAGTGCGCTATCAGTAGTATGATTGTACTTCGACAATTTTTTGGGATAAAAAATTGGATTTTTTATTTTTGCAAAGCCTTGAAAAAGAGGCGTTTTTTTGTTGCCGTTTGGACGG # Right flank : TTGCAATGTATCCCACCGGCCAACCACCTCTTGCGCACAAATTTAATCGCATATAGTTTTGCATGATAAAAAAAGTCATGCGCAATAATCCTGAAGTGCG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTTAATCGCACCATAGAGGAATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,-0.40] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [61.7-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0 Confidence: HIGH] # Array family : NA //