Array 1 3112248-3111555 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_KK316792.1 Mycobacterium tuberculosis TKK_03_0090 adYHG-supercont1.1, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                 	Spacer_Sequence                             	Insertion/Deletion
==========	======	======	======	================================	============================================	==================
   3112247	    32	 100.0	    39	................................	GCCCCGTGGATGGCGGATGCGTTGTGCGCGCAAGTGTCG     	
   3112176	    32	 100.0	    44	................................	CCGACGATGGCCAGTAAATCGGCGTGGGTAACCGATCCGGGTCG	
   3112100	    32	 100.0	    42	................................	TAGTACGCCATCTGTGCCTCATACAGGTCCAGTGCCCTGTCG  	
   3112026	    32	 100.0	    39	................................	CTGACGGCACGGAGCTTTCCGGCTTCTATCAGGTAGTCG     	
   3111955	    32	 100.0	    40	................................	CCTCATGGTGGGACATGGACGAGCGCGACTATCGGGGTCG    	
   3111883	    32	  96.9	    44	..G.............................	GCATATCGCCCGCCACACCACAGCCACGCTACTGCTCCATGTCC	
   3111807	    32	 100.0	    39	................................	CTGACGGCACGGAGCTTTCCGGCTTCTATCAGGTAGTCC     	
   3111736	    32	 100.0	    44	................................	ACACCGCCGATGACAGCTATGTCCGAGTGACATCCTCCCAGTCG	
   3111660	    32	  96.9	    42	..............A.................	TTGAACCGCCCTTCGCGCGGTGTTTCGGCCGTGCCCGAGTCG  	
   3111586	    32	 100.0	     0	................................	|                                           	
==========	======	======	======	================================	============================================	==================
        10	    32	  99.4	    42	TCAGACCCAAAACCCCGAGAGGGGACGGAAAC	                                            	       

# Left flank :   NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGAGGGGACGGAAACATTTTGAGCGCGAACTCGTCCACAGTCCCCCTTTCAGGTCG
# Right flank :  TACGACGACTGGGTCGCCACCGCGTCTGTTGACCGGCATTCAGGATGAGCATGATGGCGGCGTTGACGGTGAGGACGTTTGGTCATGAAATGACCCCGCCGGGAGATGTCCGGCGGGGTCGGTGGTGTTCGGGGTGTCGGTGTGGTGTTCAGTCTGCCGTGACTTCGGCGATGGCGGTGCGGGTGGTGGATTCGTCGACGATGGCCTTGTCGGCGGCGAAGGCGGCGACGAGGGCTTGCAGGGCGAGGTTGTTGACCGCGCGGGGGTAGCCCCGGCTGGTCTGGTGGATCAACCCGATGGCGTCGTCGGAGAACAGGGCATCGTCGCGTCCGGCTAGCTTGAGGTGGTGGCGTAGGTAGCTGCCGGTGTTGGTGTCGGTCATGGGCGGCATGGCATATCGGAGTCCGATGCGCTGGTCAAGCGCGGCGAGCACGCCGAGTTTCATCCGCCGCCGCAGGGTGGGTTGGCCGATGAGCAGGCAGGCGAACGGGCTTGACGAG

# Questionable array : NO	 Score: 6.23
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     TCAGACCCAAAACCCCGAGAGGGGACGGAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [1,12] Score: 0.37/0.37
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  R [-6.40,-7.70] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [1-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [38.3-40.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,1.15   Confidence: HIGH] 

# Array family : NA
//