Array 1 275715-272266 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACHHO010000001.1 Inhella inkyongensis strain DSM 23958 Ga0415247_01, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ==================================== ================== 275714 37 100.0 33 ..................................... GGCGTGGGCCTATGGCACGGTCCCGCAATCTGG 275644 37 100.0 33 ..................................... GCCCTGGCCGGCGCGACGATCCCGCCCGGCCTT 275574 37 100.0 34 ..................................... TTGGCTTGACGCTTACAGTTTGTCGCGAGTTGCG 275503 37 100.0 34 ..................................... ATGTGCGGCCTTTCATGCCACGGGAACGCCGCCC 275432 37 100.0 35 ..................................... GTCAGTCTCACGCAGCCAATCGACACCACCAATGC 275360 37 100.0 35 ..................................... ATCGAATGGGATTTGAGGCATGGCCGCGCGTGGCG 275288 37 100.0 34 ..................................... CTGTTGAGCCGCGCTCAGGGTCGGGGGCTGTGGT 275217 37 100.0 33 ..................................... GTTGAAGTGGTGAACAACGCCGCCAGCGGCACG 275147 37 100.0 34 ..................................... CGCGTGGCCGAGCCGCATCACGATGGGACGCCGC 275076 37 100.0 33 ..................................... TGGCTAGGATTGAGGCGGTAGGCGCTAGCTTCG 275006 37 100.0 33 ..................................... ATCGAAAAGCCGAATCAATTGAGCCATAGCCCA 274936 37 100.0 35 ..................................... CACCATCAAAGGCTCTGCGGGCCGGCTGATCGGAT 274864 37 100.0 34 ..................................... CTCATGGCGCCCAGGCCTCCGACAGATCCGGCAC 274793 37 100.0 35 ..................................... CCGGCGCTCTTCGACGGTCTGCACGCCCACAACCT 274721 37 100.0 36 ..................................... AAGATCCCCCCGGTGATGTTGTCCACGAACTGGAAC 274648 37 100.0 35 ..................................... GCCTGCTCGATGCCGAGCACTTGAGCGCCGCCGAC 274576 37 100.0 34 ..................................... GTTTGATGTGGTGGACAACAGCAACCGCAGCAGC 274505 37 100.0 34 ..................................... AGCGCAGGCAAGCGCATGCACCGGATCACCCGCA 274434 37 100.0 35 ..................................... TCGATCTGGGCATCGGTGAGCTTTTGACGTCCTGA 274362 37 100.0 33 ..................................... CGCACGCCCTCCGGCGTCTGGCTGCACAGCACG 274292 37 100.0 34 ..................................... GTCTGCGTCGACGACTGTTTGTAATGGCGGCTGC 274221 37 100.0 34 ..................................... GGCCAGATGCTGGCCGATCTCGGGGGGCCAACGG 274150 37 100.0 35 ..................................... TTCGCGTTCCGTGTCGCCATCGATAACTGAGGCCC 274078 37 100.0 34 ..................................... ACGGAGTGCGGGCGCGCTCAAACGCCACCTCCAC 274007 37 100.0 33 ..................................... ATTGTGCCAACACGCGCCGGCATCCTGGGCGGC 273937 37 100.0 35 ..................................... AACGGCACCGCCATTGCCAACCTGGCCGACAACGC 273865 37 100.0 34 ..................................... CAGCCCATCTAGTGCCTCACTTTCGGGCCAGCAG 273794 37 100.0 34 ..................................... ATGCCTTCGGGCGTGCGCGCCGCGCTCGAAAAAG 273723 37 100.0 34 ..................................... TGTGATGCTGGCGCGGGACAAGGCGATCCGGGCC 273652 37 100.0 34 ..................................... AAGGACGCCCGCGACAAGCTCAAAAGCGGCCTGC 273581 37 100.0 34 ..................................... CTGCAGGGGCGCCGCAAAGCGCTCGGCCAGCTCA 273510 37 100.0 34 ..................................... GGGTGGCCGGGAATCCGTACTGGCTGACCCTGGA 273439 37 100.0 36 ..................................... TGACATGGTGAAAGCCCGCCAACTGATCGCCAAGAC 273366 37 100.0 35 ..................................... TGCCAGCAGCTGGAGCACGTGGCTTTGCCGTGCGA 273294 37 100.0 33 ..................................... TTCATTGCCGGAGCGGGGATGTACTCAGCCCCG 273224 37 100.0 35 ..................................... TGGGAGGGAGCCATGCCGCACATCACCGCAGCCTT 273152 37 100.0 33 ..................................... GGCGGTGATGCTGGCCAGCCGTGCGGTGGCCAA 273082 37 100.0 33 ..................................... GGCCTGCCCCCGGGCACCGTCGAAATCGTCGGC 273012 37 100.0 34 ..................................... ATCCGCTGGTCTTGGCGCCGCTACTCCTGCGGCG 272941 37 100.0 35 ..................................... TGATCGCTCAATGCGCTTGCGCTCGGCTTCAGTAG 272869 37 100.0 34 ..................................... TTCCATCAAGGCCTCGCTCTTGCTGATCCAGCTC 272798 37 100.0 33 ..................................... GCTGGGTCGCTCGCTTGAGGACTTGAAGCGCAA 272728 37 100.0 34 ..................................... CAGTGGTGAGGGCCGGGCAATGATCATCTTTCAC 272657 37 100.0 33 ..................................... ACGCACGAGCTGCAGGCGGTGCAGTGGATCGAA 272587 37 100.0 35 ..................................... TTCGTTCAGCAGGCCAGCGCGGCCGGCGATGACGC 272515 37 100.0 34 ..................................... TTTGGGTAACTGCCCTACGGGGTTGCCTGATCAG 272444 37 100.0 34 ..................................... CTGGAGGCCGGCAGCATGAGCGGCATTCGGCCCG 272373 37 100.0 35 ..................................... TTGGCATCGGTGGGCGGCAGGCCCACCAAGCCGCC 272301 36 97.3 0 ...............................-..... | ========== ====== ====== ====== ===================================== ==================================== ================== 49 37 99.9 34 GCACCGCCCGCCTTCACCGGCGGGCGCGGATTGAAAC # Left flank : ATGTTCCCTATCTGATTCGCTGAGCGAGCATGTTGGTCATCGTTTGCTATGACGTGAACACCGAGACCCGCGAGGGGCGGCGGCGCCTGCGGCGCGTCGCCAAGCTGTGCGAGGCCACTGGGCAACGCGTGCAGAAGTCGGTCTTCGAGTGCCAGATCGACCTGGCCCATATGGAAGAACTGGAGCGCAAGCTGCGGGCCGCCATGGACGAGACGCAGGACTGTCTGCGGCTCTACCGCCTGCCCGAGACCCGCGGGGCCGAAGTGCGCGAGTACGGGCGCTTCAAGGCGGTGGACTTTGAGGCCCCCTTGGTGCTCTGAAGCCAGGCCTGCGCGAACCCCCAGTGATGGCTTCTCACGCCATGGGTTCGCGTTCCGCTGCCGGCGCCGTGCTGATGCAGTGTTGCCGGCATTTCCGGGCGTTCGCACCGGGCACTTCCATCGGGGGTTCGCGCGGCACGGCAGAATTCCGCCGCTCCCACAAGCACTTGCAATGACGGA # Right flank : GGATCTTGGCCACTGACGCCAAGAGCCCCAGCCTCGCAACTCCATCTCGTATTCGACGAGCTCCCACCTTCACGGCCGCACTCCCCGCACCGCCGTCGCCCGCGCTCGCACGGTGATGGCGCCGCCGCTGTCCTGCAGCCGCTGCCGCACCCGGGCCTGCAACTCGCCGCGTGTGGCCTCACTCATGGCGTCGAACATCGGCCGCAGGGTGTTGCTGGCGGCGGCGCTGTGCCAGTAGTCGTCGAAGTGCGCAAATTGGCGCTGGACCTCGATGGTGCGGACCTGCACTTGCTGCAATCCGGCCTGCTGCCACAGCGCGGCCGAGGCCTCGGGGCGGCTGATGGCGGCGCTCGGCGGCAGGCGCGGGGGCAGCCCCATCTGCTTCATCTCGGCGCCGATGTCGGCCAAGGGAAAGCCACCGTTCAAAAGGTCCCAGTGGTAGGCGGCCAGGGTGCCGCCCGGGCGCACTGCGCGCACCATCTCGGCCAAGCCGGCAGCAG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCACCGCCCGCCTTCACCGGCGGGCGCGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [4,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GCACCGCCCGCCTTCACCGGCGGGCGTGGGTTGAAAC with 95% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-17.10,-16.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [40.0-35.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //