Array 1 64217-60264 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJBQT010000001.1 Flavonifractor plautii strain MSK.23.74 GKBJMFKP_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ====================================== ================== 64216 33 100.0 35 ................................. AGGTTTGAAATAAATGGGTCAGCGGCATCACGCAG 64148 33 100.0 33 ................................. TTATCCTCTGGGTTGGAGGTCACGCGGTACGTC 64082 33 100.0 34 ................................. TGCTTGAGGAGCTTTGCCAGCTCTCCAACCAGTA 64015 33 100.0 33 ................................. GAGCAACTCTCCATCAATCGCCCTTGCCATCGT 63949 33 100.0 34 ................................. TCCCCCGCAGAACGGGCACGGAACCAGCACCCCC 63882 33 100.0 33 ................................. TTTGTCCAGCTTTAAGCCGTGCCCGATGTTGTA 63816 33 100.0 37 ................................. CACCAATGGAGTCGAGCCGTGGTCAAATCTATCTCGT 63746 33 100.0 35 ................................. CGCACATGGGCTTTGCGCTCCTGATCACCGGCATA 63678 33 100.0 33 ................................. GGAACTACTATGACTACGTGGACACGCTGCGGG 63612 33 100.0 34 ................................. CATGCGTCGTAGAGTGCGGCCCAAGTGGGCGCCT 63545 33 100.0 36 ................................. ACGTCCACCATGACCCAGTGCTTACAGGTAGCGCAG 63476 33 100.0 36 ................................. CTTTATATGGGTGAGGATGGCTGCCCGCGGGCGGTG 63407 33 100.0 35 ................................. AGGCGGTGTTCAGTTTTCCTTGTGCCACGCGGTAT 63339 33 100.0 35 ................................. GCATAGGCTCAAGCACATTCCGCTCAATGGTGGAC 63271 33 100.0 37 ................................. TGCTACTGCACTCGGCATATGTGCGCTTCCCGCTTAG 63201 33 100.0 34 ................................. TCATGTGGCAGCGGTGAGTTCCAGCATACACAGC 63134 33 100.0 33 ................................. CGCCCTGCTGGTTGTGTCTACAAATTGTGAGAG 63068 33 100.0 34 ................................. TCCCGGTTGATCTGCGCCAGGCAGAGCAGCGGGA 63001 33 100.0 34 ................................. AAAAATAGAGGGCGGAGGCTATTGCCCCCGCCCT 62934 33 100.0 34 ................................. TGCTACTCGCCCATGCACCACAATGTCGCCTACC 62867 33 100.0 34 ................................. TGCTACTCGCCCATGCACCACAATGTCGCCTACC 62800 33 100.0 35 ................................. GTCCAGGTTGTCCTCCTTTCGCTGGCCGTAGGAGC 62732 33 100.0 35 ................................. GCCTCCAGCACGAAATCTGCCTCTGTCAAATGCTC 62664 33 100.0 33 ................................. TGGAATACAGTAGGGGCGGAGGTACGGTTGAAC 62598 33 100.0 33 ................................. GAGCAACTCTCCATCAATCGCCCTTGCCATCGT 62532 33 100.0 37 ................................. ATAGAAACTCTCCTTCGTCAGCGTGCGGATGTCCCGC 62462 33 100.0 34 ................................. GATCTGCCGGACGGCCGGATCGCGGTAAAAATGC 62395 33 100.0 35 ................................. AAAAGCACAGAGATACAGGTCTATGATGTGGTGCG 62327 33 100.0 34 ................................. TGGTGGAATCGATATCAACTGACAGGAGGAAAAG 62260 33 100.0 36 ................................. TTTAAGGCTGGGCCATGTGAACGATGCTCATCCAAG 62191 33 100.0 36 ................................. TTTAAGGCTGGGCCATGTGAACGATGCTCATCCAAG 62122 33 100.0 34 ................................. TTTCGCCTGTTGAAATACTAAATCCACCTTGCTT 62055 33 100.0 33 ................................. CGCATGCTGGGGCATCCCTGCTGCTCTCCCAGT 61989 33 100.0 37 ................................. CGGCGTGGGAGACTGTTTTGGAGGCAGGAGAGGAGCT 61919 33 100.0 34 ................................. TCTGTTTGTCATCAGCAACCGACCTCCTTGAAAT 61852 33 100.0 34 ................................. CTCCTTCACATGGCGGGGGTAGCGGCGGTGCAGC 61785 33 100.0 33 ................................. TCCTGGGCCTCCGCGTCAAGCTCCGCCCAGCTC 61719 33 100.0 35 ................................. TCAGTGAAGTAGGCCGCCCTGCGGGCCTTGACCCA 61651 33 100.0 34 ................................. CAGGAGAAGATGGACGTCTATCTGGCCGCCGACC 61584 33 100.0 36 ................................. CCTTCTTTGTGCGGCAGACCAGGTTACAGGACACGC 61515 33 100.0 33 ................................. CCAGGTCAGGCGGCGGAGGCCGCTTCGTGCCAT 61449 33 100.0 34 ................................. ACGGGCGGCCTCGTCAATATCATCTGTGGGCCAA 61382 33 100.0 37 ................................. GGAGAAGGGGATCATGGCCGGCCGGGACGCCGATGCC 61312 33 100.0 35 ................................. TGGCATTTGGTGATGTAGTCGGCCAGCTCCCGGCC 61244 33 100.0 34 ................................. CGGTCAGTAATCCAGTGCAGGCCCTTCCGCCGGG 61177 33 97.0 36 .............................G... TACCGTGGACGACCACGCCATTGTCCAGCACCTCCC 61108 33 100.0 34 ................................. CTCGTTCCAGCGATCGACGGAACTTGGTGATGAC 61041 33 100.0 36 ................................. CGTAATCGTACTGGTCAAACGCCGACACAAACAAAG 60972 33 100.0 35 ................................. TGGACCGGGTGTCCAAACATCCACGGCTGCACCTC 60904 33 100.0 33 ................................. GTACATGTCACGCAACAGTGGGTGGATATCCTG 60838 33 100.0 35 ................................. TGTGTTTTGGGGAGCTCTGGCTGTGGGCAGCGTGA 60770 33 100.0 35 ................................. AAAGAATCCGCCTAGCATGATCCCTTTTGTGGGCG 60702 33 100.0 33 ................................. CTGACATTGGCTTGAGCCGTTGAGGTTCTGGTC 60636 33 100.0 35 ................................. TCCGCCGTCTTGGTGAGCACCACACCCACCCCCTG 60568 33 100.0 34 ................................. ATGCTTGCTCCTCCTTACTTCCGGTCCGCCAGCG 60501 33 100.0 35 ................................. GGAACGCAGGCCGAGCGAGTACACACCAATAAGGA 60433 33 100.0 38 ................................. AGTGAGAAATACGACATCACCAAGCATCCCCGGTATAA 60362 33 93.9 34 ............A............G....... CAGCGGCTGGACCGCGGCCACATGGAGTATGTCT 60295 32 93.9 0 .................-.............C. | ========== ====== ====== ====== ================================= ====================================== ================== 59 33 99.7 35 GTCGCACCCCTCGCGGGGTGCGTGGATTGAAAT # Left flank : GGACGCCTATCCGCCCTTTTTGTGGAAGTGAGGCCATTATGCTGGTTTTGATTACCTACGATGTCAATACAGCGGATGCCGCCGGGCGCAAACGCCTGCGGCAGATCGCCAGGCAGTGCGTCAACTACGGCCAGCGGGTTCAGAACTCCGTCTTTGAGTGCAAGCTGGATCCGGCCCAGTACAAGCTGCTTCAAGCCAAGCTGTGTGCGATCATGGATCCCGAACGGGACAGCCTCCGCTTTTATTCCCTGGGAAATCGCTATGAGCAGAAGATCGAGCACTTTGGCTTTAAGCAGACCTACCTTCCAGACGAACCTTTGATTTTGTAGCGTGCGAAGTCCAAGATGACACGCCTTCTCCGGCCGGTTCGCACCCAAAAAGCATAAAGGAAAGCTTAATGGAGCATAGGCGCGTTTGTTTTTGTATGCTCAGCCTTCTTCCCCTTGTGCAAATAAGCAAATTGAGCCAAGCAAACTCTCTGCTCTTTGGTAAAGTTTGCT # Right flank : GTCTTACAGGGGCGCCTGGTCAGTTTGCAGGAGACGCCGCATAGGGGCGCGGGTCGATTCAAATTTTCACCCCGCGCCCCTGCTGTTTGCGGGCAAATGTCAATAGGTAAGCGTAACAAAAAGTAAAAAAATTTTCAAACGCCCCCAAAAATCTGGTTGAACAGGTCTGCGCTGCTATACCACCCCAGGATCTTGCGGGGGTATCTGTTCAGCCAGTCCTCCACCATGCGGACCTCTTTGGGGGAAACTCTGTCGAAGTTGGTTCCTTTTGGGAACTTCCGCCGGATCATCTGGTTTTGCTTTTCGTTGCTCCCCCTTTCGCTGCTGCAATAGGGATGACAGTAATACACTTTGGTGCGCTGGCCGCCTGCCTTAAATATGGAGGTTTCCATGCCCTCGCAGTTGGAAAACTCCGTGCCATTGTCCACGGTAATGGTCTTGAACACTTCCGGGAACATTTTTCCGTATTTCCGCTCCAGCGTATTCATGGCCCGTACCAC # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCCCTCGCGGGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [7,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACCTCTCGCGGGGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.90,-8.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [35.0-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,9.68 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //