Array 1 182465-179937 **** Predicted by CRISPRDetect 2.4 ***
>NZ_CAJHQC010000005.1 Klebsiella pneumoniae isolate Kp5155, whole genome shotgun sequence Array_Orientation: Reverse
Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion
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182464 29 100.0 32 ............................. TTAACCATTCTCCCCGGCTCAGTACCTGCCCG
182403 29 100.0 32 ............................. GAGCAGGCACCCGCCGCAACGACGAAGAGCGC
182342 29 100.0 32 ............................. AAATCAGCCAGCACCACGATTCTGGGAAATTT
182281 29 100.0 32 ............................. ACAGGCTTACCCGTATTGAGACGGTTGCTGAA
182220 29 100.0 33 ............................. GAAACCCCATCAGATGACCCTCCCCATGTTGGC
182158 29 100.0 32 ............................. TTGCCTGGTCTGCTTGGTGATGATCCGTGGTA
182097 29 100.0 32 ............................. TACAGAACGACTGAGGCGGCGTGTATTGCATA
182036 29 100.0 32 ............................. GATCTTAACTCTATTGCCAATGGCGCAATTCA
181975 29 100.0 32 ............................. GGCGATGCGCGCTCTGCTGGCTATCGGTAAAA
181914 29 100.0 32 ............................. AATGCAGCAACCGGCAAATATATCGCCGGTAA
181853 29 100.0 32 ............................. GGGCTGCCGCACGCCTGGGACGAGTCGAGCCC
181792 29 100.0 32 ............................. CCGCAATAACAAAAATAAATGAGGGTTAAAGT
181731 29 100.0 32 ............................. GTAAATGGGAATGAGTAGAAGAGCGTCATTGG
181670 29 100.0 32 ............................. CCCCCGCGCACATGCTTAAACGCGCTATCACG
181609 29 100.0 32 ............................. GGCATCTGTTGTGTAATGTTGAGTTTTTTTCA
181548 29 100.0 32 ............................. CAGGTTAAACATGTAAAAAATGACCGTCGCCG
181487 29 100.0 32 ............................. CACATTGCCCGGTCTGAAAAGTATTTGAAAAT
181426 29 100.0 32 ............................. TCCGCACAGTCAAACGCTCCAGACACCAACCC
181365 29 100.0 32 ............................. CCGGAACACCACCAGTAACAGCTACTGTAGGC
181304 29 100.0 32 ............................. TGACCCTGTTGATTTTGTTCCAGGTAATACGT
181243 29 100.0 32 ............................. TTAACCTCGTCGTTCTGGTTTCCGCCCAGGAT
181182 29 100.0 32 ............................. GAACCTGAATTCGAAGGGTGGGTCATCCTTCC
181121 29 100.0 32 ............................. GGACCCCGAGCGACCCGGTCACCCTCCGACCT
181060 29 100.0 32 ............................. CCGTCGAACGGCGGTTATATCCATCTTGAGTC
180999 29 100.0 32 ............................. ACCGATCCCACAATTGCGGCGGTTGAGATTGA
180938 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC
180877 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC
180816 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC
180755 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA
180694 29 100.0 32 ............................. CCCTCCGCTTTCAGGGTGTGGCTGATATCACC
180633 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT
180572 29 96.6 32 .............A............... TGGGTAGAGGTTAACTGGTTATTGGTCATTGA
180511 29 100.0 32 ............................. ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG
180450 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG
180389 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT
180328 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG
180267 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC
180206 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG
180145 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC
180084 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC
180023 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT
179965 29 75.9 0 ...........ATTC...A......G..C |
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42 29 99.3 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG
# Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCCTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT
# Right flank : GTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC
# Questionable array : NO Score: 6.22
# Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG
# Alternate repeat : NA
# Directional analysis summary from each method:
# Motif ATTGAAA(N) match prediction: NA Score: 0/4.5
# A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37
# Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5
# Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37
# Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41
# AT richness analysis in flanks prediction: R [51.7-76.7]%AT Score: 0.27/0.27
# Longer leader analysis prediction: NA
# ----------------------------------------------------------------------------
# Final direction: R [0,5.92 Confidence: HIGH]
# Array family : I-E [Matched known repeat from this family],
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