Array 1 1419120-1415669 **** Predicted by CRISPRDetect 2.4 *** >NC_013158.1 Halorhabdus utahensis DSM 12940, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 1419119 30 100.0 36 .............................. ACGTTCAGGACGCGAGCATATATATTATATATCGCG 1419053 30 100.0 35 .............................. CGATCCGGAGAGGAGTCGGACTTTGATTTCAGTGG 1418988 30 100.0 36 .............................. TGGAGGCCTAACGATGTCGGAGTGCGTTCACTGCGG 1418922 30 100.0 35 .............................. TAATGAGCCGGACCCTCTCGAACATCTCCGACATC 1418857 30 100.0 36 .............................. AAGCAGACTGTCATGAATCTCGGGGGTGATTTCTAA 1418791 30 100.0 37 .............................. CAGGAGTTCCGACCACGTACAGGTCCCGTGCGTCGGA 1418724 30 100.0 35 .............................. CTGCACTCCAGGACACGCTCGCCCAGACGCCGGCC 1418659 30 100.0 34 .............................. GTCGGGTCGTCGACGGCGATCGGGGCGGTCGCGG 1418595 30 100.0 37 .............................. GAGATTCTCCGCGCGGTCGACCAGAAGGCGGGCGATG 1418528 30 100.0 36 .............................. GTCGCGAGGATGTGCTCGCGGTAGACGTCCTCGGGC 1418462 30 100.0 37 .............................. TGCGTCTCGACGTCGCCAGGGGCGAGGATCTCCAGCA 1418395 30 100.0 37 .............................. GAGGATTCGGGCGAACTCGTCATATGCGCCGTCGTCG 1418328 30 100.0 35 .............................. GCGACGTCCGGGATCGTCGACGGTGGCGAGTGCAT 1418263 30 100.0 35 .............................. TGGGAGCTGCAGCAGGACCAGCTCGACCTGGCGAT 1418198 30 100.0 35 .............................. CTCACGGGGATCGGCCCCTCCTCGGCGTGGAGGTC 1418133 30 100.0 36 .............................. CCAAGACAATCACAACCATGGCATCGTGTGGGATTT 1418067 30 100.0 37 .............................. TCGATCGGTTCGGTCTGGGCGACGATCGCGTCGACGG 1418000 30 100.0 35 .............................. AAGCGGCGGATCTGGGTCGATCCCGATCCCGGTAT 1417935 30 100.0 35 .............................. GAGGCACCGACCGACGACGGTCCGCAAGTCGTCTC 1417870 30 100.0 36 .............................. GCGGCGATCAGTGCGTGCGTCATGCGTCGTCGAGCC 1417804 30 100.0 37 .............................. TCGCGGACCTGGTCGACCTTCTCCTCGAGCTCGTCGA 1417737 30 100.0 35 .............................. TTGGTTTTGATCGAGGGCATAAAGACATCCGAATC 1417672 30 100.0 36 .............................. GATGCTCGACTCGCGAATGCTGGAACTTGCGGACTA 1417606 30 100.0 37 .............................. GAGGCCGAGGGCGACGGCTACCGAGTCTTCTTGCCCG 1417539 30 100.0 37 .............................. CGACTCTGTGACCTGGACCGAAGACGTTGACGTTCCA 1417472 30 100.0 35 .............................. TATTGCGATACCTGTAAGCGCGACGTGACTGGCTG 1417407 30 100.0 34 .............................. GTCGGGTAGTTCGACGGGCCGGCCTCCATGCTGG 1417343 30 100.0 35 .............................. GGTCGTCGGGCACACCGGCAAGGACCTCCACCCGG 1417278 30 100.0 33 .............................. CAGCGGAGAGGGCTTCGGCAAAGCCGACGTCGG 1417215 30 100.0 36 .............................. TCGCGGAGCTTCTCGACGGTGCCAGAGCCGATTCCG 1417149 30 100.0 35 .............................. GAGTTGCTCGCGGTACTCGTCGGCGTCGAGACCGA 1417084 30 100.0 36 .............................. GACGAGGATCTCGGCATCAAGACAGTCACCGAGCCG 1417018 30 100.0 36 .............................. GGCTGAATCGGCGGGCCATCGAGCATAGAACTCGGC 1416952 30 100.0 36 .............................. TGGATTCGAACCCAGAACTCCGTCTGTGAAAACAGG 1416886 30 100.0 35 .............................. CGGTGAGTTCGACGTTCACCACACCGACCTGACTG 1416821 30 100.0 36 .............................. GAGCGGGGCACGCTCCCCGATGAAGGTGATGCGATC 1416755 30 100.0 35 .............................. CTGGCTGCTCTGGCGATCACCCAGGCCCGCTTCGG 1416690 30 100.0 36 .............................. AGGACTGGGGTTTCGTGGATAGCGAACGTGAGGCAG 1416624 30 100.0 36 .............................. AGGACTGGGGTTTCGTGGATAGCGAACGTGAGGCAG 1416558 30 100.0 35 .............................. CCGGACGTGGAAGTCGAAAGCCTGGATCATGCCCA 1416493 30 100.0 37 .............................. ACGATCACGGCGATCGACGGGGCCGACAGCGCGACCA 1416426 30 100.0 36 .............................. ATCGCGTTTAGGGAGATGAGTAATAGCGTCATCACC 1416360 30 100.0 36 .............................. GGATGGTATTCAGCCCTGAAACGTCGTTTGAGTATT 1416294 30 100.0 36 .............................. TTGCAGTCATCGAGGGTCGATCCCGGACCGACGACA 1416228 30 100.0 37 .............................. GGATGGTATTCAGCCCTGAAACGTCGTTTGAGTATTC 1416161 30 100.0 36 .............................. GCTCTCAGTCGCGCCGTTCTTGATCGCGTCGAGCGC 1416095 30 100.0 34 .............................. TCCTGTCGACGGTGATGTTCGGCGGCATGGTCGC 1416031 30 100.0 36 .............................. CCGATTTTCAGGGCCGGCGTCCGGTTGGCGAAAAGG 1415965 30 100.0 34 .............................. TGGCAATTGTGATTGCTCCCCCAGGGGTCGGGGC 1415901 30 100.0 37 .............................. GGACAGTATTCAACCCTGAGACGTCGTTACTGTACTC 1415834 30 100.0 37 .............................. TCCAGATTCAGGACCGGGCCGAGCGCCTGCTCGACTG 1415767 30 93.3 37 ................T...........A. TCGGCGTGACTGTGGTCGTGGTCGTCGCCGTGATCGT 1415700 30 83.3 0 .......CA.......T..T........C. | G,T [1415673,1415683] ========== ====== ====== ====== ============================== ===================================== ================== 53 30 99.6 36 GTTTCAGACGGACCCTCGTGGGGTTGAAGC # Left flank : CGATCGGACGATCGAACACCCAAATCTCAACCGGAAGGTCAGTTATCAGTATCTCCTTCGGGTCGAGGCGTACAAACTCAAGAAGCACTTGTTGACTGGCGAGTCCTACGAGTCCTTCGAGCGGTGGTGGTAACATGGTGTATGTTGTCGCCGTCTACGACGTCGAAGCGGACCGAACCTACCTCTTTCTGAACTTCTTGCGTCGGTATCTCACACACGTACAGAACTCGGTGTTTGAGGGTGAAATCACAGAGGGCGATCTCGAAGAGGTCAAGGGAAAACTTGATTCGATGCTAGAGCCCGGCGAGTCGGTGATCGTCTACCGGATGAGTTCCGAACAGTATGTCTCGCGTACTGTCTACGGCGAGGATCCGACCGAGGACAGCCAATTTCTATAGTGTCGTCATCGACCCCCCGGGTTTCGTGGGCTATTGACGGTCGACGAAAACACTAACTCCCAGGCAGTGGTATCACGTGCTATATGGCCGGTTTCGGCCATG # Right flank : AGACGAGGGAGAAACATCGGCGCAGTCCACAAGTTCAGGGCGGACTTTCGTGGGGCGAATACCTCCAACACCAGCACTGTGACGGAATGGCGTTTCCGACCACCCGGGAATATCACTCTGATTGCAACCGAACCCTACACGTTCTCGATCTGTCCGTCCCGCGATTGCCAGTCTTCATGCTCGAGTAGTTCTTCAAGCATTGGCCGAAGATCCGAAGCGGCGACACCGAAGAACTTCTCGCGGCCGACAGGCGTCCGGAATCGGACGATACAGGTGTATTCAGTGGCTTCGAAGACCGAAAGCGTACTCCTGGTCGACGGATTGGCCGCCTCGAACAGCCGGGTCGCACCAGCACCCGTCACGCGCGTGCCGAGTGCCCAACTCAGCGATTCGATCGCAGCCCGGTCGATCGGCAGGATGTCCGCGAGATGCTTTCGGTTCCCCGAATCGGATCCCCCCTGCCGCCGCTCACGGGATGACATACCACTGCATACGCGAGC # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGACGGACCCTCGTGGGGTTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTTCAGACGAACCCTTGTGGGGTTGAAGC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.30,-6.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [41.7-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //