Array 1 481-1 **** Predicted by CRISPRDetect 2.4 *** >NZ_CACSGN010000062.1 Tenacibaculum maritimum strain P1-39, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================================================================================================================================================== ================== 480 36 58.3 159 A..A.A....T.G....C......TGC..GACC.GA CGAAGCCGCAAAAAAAGAATATATTCGTATTACTAGTTTAGGAGAAGGAAAAAAAGGATGGAAAACAATGAACCCTATTAAGGTAAAACTAAATAGCATAGGAAAAATAGTAAAAGCATAGTGCTTATAGCATTAACGTTCTTTGAAATATATAAACAT C [459] 284 35 83.3 30 C..T..AAC.-......................... TTCAAATATTTAATTGCGTTACACCAAGTA 219 36 100.0 30 .................................... GTTACAACTGAGAGTTTTAAGGAGAACTTA 153 36 100.0 29 .................................... AAAGAATTGCCAGAGAAAAAGCAGAGAAG 88 36 100.0 29 .................................... TAAATCCTCCAATTGAAGTTGGGGAAACA 23 23 63.9 0 .......................------------- | ========== ====== ====== ====== ==================================== =============================================================================================================================================================== ================== 6 36 84.2 56 GTTGTGGTTTGATAAAAGATTAGAGATAACGATATT # Left flank : AGATCCAACAATTAAAAATCTAATTTTTAAAAGAATACAAAAATTAGGAGGCTTTGTAAAAGGAAAAATACCATCAGAAACCTTTTACAAACTAGCAGAAAACGGACAAAGAGTTCCTCAAATTTTCTTACCCAATAAAAACGGAGCTCCTGTTCCTATTAAAAAAGTAAGAATAAGAGAGGTAATAGGAAAGGCAGTACCGTTAAAAAATACTGTCAACCAATATGTAAACCCCAAAAACAATCACCATATATTAATTTATAAAAATGCCAAAGGAATCATGGAAGAAGAAGTAGTTAGCTTTTGGGAAGCGGTAGAACGCAAAAAGCAAGAAATAGACGTGTTTAAAATGCCAAAAAAGGGGAAAGAAAAACTAGCAATACTCCAAAAAAATGATATGTTTGTACTTGGCTTAGACATAGAAACAGTTGAGGAAGCATGGCAAGATAACAGCCTGCTAAAAGAGCATTTATACAAAGTGCAAAAAATATCTAGCAAAG # Right flank : G # Questionable array : NO Score: 2.69 # Score Detail : 1:0, 2:3, 3:0, 4:0.21, 5:0, 6:0.25, 7:-2.77, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGGTTTGATAAAAGATTAGAGATAACGATATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.91%AT] # Reference repeat match prediction: R [matched GTTGTGGTTTGATTAAAGATTAGAGAACACGATATT with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,4.5 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], // Array 1 53-1334 **** Predicted by CRISPRDetect 2.4 *** >NZ_CACSGN010000071.1 Tenacibaculum maritimum strain P1-39, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 53 36 100.0 30 .................................... AATAGAACAAAAAAAAGAAACCTCTCGATT 119 36 100.0 29 .................................... CTAAAGGTATTTTAAAAGAAGGAAACGCA 184 36 100.0 30 .................................... TGGCGTTTAATAATGAAGGCCACTGGCGTC 250 36 100.0 29 .................................... AACCAGCAGCAGCAGAAAGAGCAGCTAAA 315 36 100.0 29 .................................... CTGTTTTTTTACTTCAGAGAGTTTTAAGC 380 36 100.0 29 .................................... AAAATAAACAAATAGATGAAACTAACACT 445 36 100.0 30 .................................... CAAAATGCCGAAGCAAAAAAGGCTGCTGGT 511 36 100.0 30 .................................... TCGCAAGTTAATCCTAGGAAGCGCGGAATC 577 36 100.0 29 .................................... GAAGAGGGAAACGGAAGAACTGCGTAACT 642 36 100.0 30 .................................... AGGATTTAAAATTAAATGGAGGACTTTATT 708 36 100.0 30 .................................... TAGGTCATCTTTAAGGTCAACACCCTCTAC 774 36 100.0 30 .................................... TTAAGTTAATAATTAATATGATACAAAAGT 840 36 100.0 30 .................................... TGGAAGTTTAATGTCTAAATCAGGGAGATT 906 36 100.0 29 .................................... CGATAAAGGTTTAGATATAACTGCTTTTC 971 36 100.0 29 .................................... AAACAGAAGAAAGTACAGAAACAGTACAC 1036 36 100.0 29 .................................... CAATCAGGAATTATTACATACCTTACATA 1101 36 100.0 30 .................................... CACACCTCCCTTGAAATAAAGCAAAGTCGA 1167 36 100.0 30 .................................... AAGTGGTTATTAAACCAAAAAAGAAGTCTA 1233 36 100.0 30 .................................... TTTTAACTTGTTTTTTTAAATTTTCCCATT 1299 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 20 36 100.0 30 GTTGTGGTTTGATAAAAGATTAGAGATAACGATATT # Left flank : AAAAGATTAGAGATAACGATATTTAAATCCTCCAATTGAAGTTGGGGAAACAG # Right flank : TCGTTAGCGGCTTAGCGCTTGGTAACTATGTAGTTAAGGTATTGTATCGTATTGTAAAAATGCTTCTTATAAAGATAGAAAGGCTTTATTTGAAGCATTTTTTTATTCCTATTGTATATTTTTCTTTTTATCAATAAAGTGGTGGCAACTTTTTGTTTGGAAGCAAAAAAATAGTTTTTTTAACTAACATAGGCTTCGTTATGTTGTGATAAAAAGTTAAAATTAGCGTGTAATAAGACCAATTTGCAGGCATCAGAAAAAGTTGAAACCACTTTAATAAATTAAGGTATTAAAACAATTCTAGTTGTAAAACAGGAGGAGGAGACGCTTCTTGGGCGTTACCCCAAAAATTCATCATATTTCCGTACTGCTTGTCTGTAATTCTTAAAATACTTATTCTTCCATAAGGAGGCAATACAGATTGTATTCTTTTTTCATGTACATCAGTACGTTCACTGCTAGCACAATGCCTAATATATATAGAAAATTGCATCATGGTA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGGTTTGATAAAAGATTAGAGATAACGATATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: F [matched GTTGTGGTTTGATTAAAGATTAGAGAACACGATATT with 92% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.40,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [60.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //