Array 1 311847-309595 **** Predicted by CRISPRDetect 2.4 *** >NZ_SNVZ01000001.1 Halothiobacillus neapolitanus strain DSM 15147 Ga0215693_101, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ==================================== ================== 311846 37 100.0 34 ..................................... AGCGCCTCGCGTAGCAGCGCAACATGCTCAGGCG 311775 37 100.0 35 ..................................... AGCGACTTGCCGCTTAAAAACGCAACCCAGGGGCT 311703 37 100.0 34 ..................................... GATCAGCTCGGTGGCGGCATCGGCGGCATCAGAC 311632 37 100.0 34 ..................................... CAGCTATCGATCGACAAGGCCCAGGCCAGCCAAG 311561 37 100.0 35 ..................................... GATATAAGCATCATAGTCGGGCAGGATTTGCTGGA 311489 37 100.0 35 ..................................... AGCAGTCGGTAGATGCAACCACTGTGCAGCAAGCG 311417 37 100.0 33 ..................................... CGGATTCACACAGTGCCACTTCTTTGCCGGAAT 311347 37 100.0 36 ..................................... AAAGAGCTTGGCGATGCCTATGCGGATGCAGCCGAA 311274 37 100.0 34 ..................................... TGCGTACTTGTTATCATCTTTGCAAATTGATTCA 311203 37 100.0 34 ..................................... AGTTCATGCCCAGCAACCGCAAGGAAGCTGGCGG 311132 37 100.0 35 ..................................... TTGTATTGGTTGGGGTCATGCCTCCACCCCCGCAA 311060 37 100.0 35 ..................................... CAGATCCAGCCAACCGTCCACGGTCAGGCCTTCTG 310988 37 100.0 34 ..................................... CGCCCAGTCCGTCATCGATGCGCTGAATGCTATC 310917 37 100.0 35 ..................................... CGGTGATGGCTGCCAGCGCAAAATCAGTGCTGTTC 310845 37 100.0 35 ..................................... TGGTAGTACTTGACCGATCCGCCGACATCAGCAAA 310773 37 100.0 33 ..................................... TTTTTCGGCCATTGGCCTTGATTGCACAGCATG 310703 37 100.0 35 ..................................... CCGTTGCGCCTGATCGGATGTTCGATGAGACAAAC 310631 37 100.0 34 ..................................... AGTCGCAGAATGACAAGCGTTTGAGTTTGCTTGA 310560 37 100.0 34 ..................................... TGACGTGATTGGGAACGCGCTGGTCTGGATTGGC 310489 37 100.0 34 ..................................... GGCCCCCGCGCGAGGTAACTTTCCATCCGCGAAA 310418 37 100.0 35 ..................................... AACATGCAATCATGGGAAGCGTGCTCGGACACCAC 310346 37 100.0 34 ..................................... GATTACAGCCTGCACCGGGTGACATTGGACGATG 310275 37 100.0 34 ..................................... TATATCCGGCATAGTTTAAGTCACCATTCCAATC 310204 37 100.0 34 ..................................... TGTTCTGGGGCTTTATACCAATTCACAACTTGCC 310133 37 100.0 34 ..................................... AATTTTTGCATCAAATGCAGTAATGGTGATGGAT 310062 37 100.0 34 ..................................... ATCGATGGGTTACCTCATGACCAGCCCAATTCTC 309991 37 100.0 34 ..................................... AAAGCCGTGGGCATCGGTTGCCACCACCGGCAGC 309920 37 100.0 36 ..................................... CTTATTAAAACGATGTGGGCAGGTGGTATGGCAGGC 309847 37 100.0 34 ..................................... TGTGGCTCTGGAATGGCCAGCTGCTCATGCACCC 309776 37 100.0 34 ..................................... CCCAAGATCAGCCGACTGGATGCGGTATATGGGA 309705 37 100.0 33 ..................................... AACTTGTGTGGATCGTATCGTAAATAAGTTCGA 309635 36 91.9 0 .............................-...TC.. | CG,C,C,A [309601,309607,309612,309615] ========== ====== ====== ====== ===================================== ==================================== ================== 32 37 99.7 34 GAATCGCCCGGCCTAACCGCCGGGCGCGGATTGAAAC # Left flank : CTATCTACCCTATCAGTCAAAGTGAGATAATCCATGCTCATCATCGTTGCCTACGATGTCTCCACCGAAACTGCCGCCGGACGCAAACGATTGCGTCGTGTTGCAAAAGTTTGTGAGCGCATGGGACAACGCGTTCAAAAATCTCTGTTTGAATGTACCATCAATGAAATGCAATATGAACAACTGGAGCGAGACCTGCTTAATGAAATCGAAGAGACAGAAGACAACTTACGCTTCTATCGCATCATCGAACCGGTAGAAATGCGCGTCAAACAATATGGCTGCTTCCGATCAGTAGATTTTGAAGGCACGCTCATTGTATAAGCGCGAATGGTTATCAAAGGCGCAACCCCCGCACCTTCGCGAAAGAATCAACATCATGATTCATATATCAAATTTTCGAAATAAAAAACTAACAACGCTGAATTACTGGCTTCCCGAGTGCATTTCGCGGGAAAATGCCAAAATCCGCTTGTGTAACGTACCGTTACAAGAGTGGA # Right flank : CACTTTTTTCGAAGGGCTTCCTTCGTCACTTCGCTCTCCAGCAGCGCCTCGCCAAGCAGCTTCATCAGTCAAGCGTTTTCCGACTCCAGCGCCTTAAGCCGCTTCGCGTCAAACACGACCATGCCGCCAAACTTGCTGCACCAGAGGTAGTAGCTGGCCTCTGATAAACCGTGCCGTCGGCACAACTCCTTGATCGGGACACCGGCGCCCGTTATTTGTCGCAGAACAATCATCCTGTACCTGAGTGGAGACAATCAAAGAGGAGATATTTTAGAGCCAGCACTCAACAATTGGAGGGTAGCGGCCAGAAAAGCATGATTAGCAGTGCCCGTTGGTCGTCACGAGGCGAAATCCAATGAGGATATGGAAAATTCGACAATCAATAACGCTAAGCAGAGTGAACACAACCGCAATTTTCTGCCTGTACCACTCATGGAAAAGTGGCAACAAATTGGCAACGGAAGTGGGTTTTCGAGAAGCGAAGCTGAGATATAAAACCC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAATCGCCCGGCCTAACCGCCGGGCGCGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [4,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTATCGCCCGGCCCAACGGCCGGGCGCGGATTGAAAC with 95% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-17.20,-16.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [46.7-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //