Array 1 12653-15460 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAVSE010000013.1 Lactobacillus mulieris strain UMB9245 NODE_13_length_43952_cov_23.201301, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 12653 36 100.0 30 .................................... AAAATTGCAGAGTGAGTTGCCGAAATTAGT 12719 36 100.0 30 .................................... AAAATAAAGGGGAATAAAAGATGAGGAGTG 12785 36 100.0 30 .................................... ATAGAAAGTTCTATCAGTCTAAAGCTTGGA 12851 36 100.0 30 .................................... CACTTGCAAATTTTGTTTTCTTTGCTAAAG 12917 36 100.0 30 .................................... TTGTTCTGCTTCCATGTTTACCTCCTAGAA 12983 36 100.0 30 .................................... TTGACCTCCTTCACTAGTAGTACTTGCACC 13049 36 100.0 30 .................................... TACTTATGGGTTTCAAAATCCAGTTATGAT 13115 36 100.0 30 .................................... TCAAACTAAGCCATATACTAACGCATACAG 13181 36 100.0 30 .................................... ACGTCCAAATACTGTCCATGTGCTGCCTTT 13247 36 100.0 30 .................................... TTTATTTCAAATTTTTTCTAATAAGTTCGC 13313 36 100.0 30 .................................... CTTGCTTTTTAGTATTACGACCCGCGGCGA 13379 36 100.0 30 .................................... TAACGTTGCAAAATGTTTTTCGAACCAAGA 13445 36 100.0 30 .................................... TTATTGCCAAGCAACTAGCATTAGGAAAGG 13511 36 100.0 30 .................................... TAAAAATTCATTAGTTTTGACCTCCTTCAC 13577 36 100.0 30 .................................... TTTTGAAGCGGCAACTGAGTTGTCTGTTGG 13643 36 100.0 30 .................................... TATCTACTGCAGGTAAAGTTGCGACTGGTT 13709 36 100.0 30 .................................... AATCAGTAAATGGCGTAACTCCAGATGCTA 13775 36 100.0 30 .................................... AAAGATAATCTGCAGGAATTCCAAATGCTT 13841 36 100.0 30 .................................... CCAGACGCAAGCATTGCCCGCTAATGTAGC 13907 36 100.0 30 .................................... AAGCACGGAAGCTATAACAGAATTCTTGAA 13973 36 100.0 30 .................................... TAAAAACATGCTATCAGACTATAAAAAATA 14039 36 100.0 30 .................................... TGGACATATTGTTGCTTTTAAAGCTGATAT 14105 36 100.0 30 .................................... GCCTGCGCCTGTCCCATTGTCTAATTCACA 14171 36 100.0 30 .................................... ATTTCCCGTCGCAAGTGCTGACCCTTATGG 14237 36 100.0 30 .................................... CTTTCAAACCTCTTTTAGCCTGTGGAAGAT 14303 36 100.0 30 .................................... CTCAGATGAAGAAGACAAAGACAAGAATGC 14369 36 100.0 30 .................................... ATACCGTGGAGATTTGATTAACTGGTATAC 14435 36 100.0 30 .................................... TTCCTTTATTTAGCATCGAAGCCCTCAGAT 14501 36 100.0 30 .................................... ATCATACGTGAAATCAAGAAGTAGAGAGGC 14567 36 100.0 30 .................................... GAGTAGCCTGCTTAGTGCAATCACTGTATC 14633 36 100.0 30 .................................... CTTATTGTGCTTTTTGAAGTAGTCAGCATC 14699 36 100.0 30 .................................... AGGTGTTTTCCCAGAATTAGACCTTGATGA 14765 36 100.0 30 .................................... TGTCATGTAAGCACCGTGCTTTCTGATAGC 14831 36 100.0 30 .................................... TGGACATATTGTTGCTTTTAAAGCTGATAT 14897 36 100.0 30 .................................... AGACGGTGTAATTGCTAGTTGTGAAGAGGT 14963 36 100.0 30 .................................... TAGAATATCGTCCTTGTTGCTTTGGTTTAA 15029 36 100.0 30 .................................... TCGTTTTAGCTCTTTCAGGTAGTAACTCAT 15095 36 100.0 30 .................................... AGAATACATACGGCTCATCAATAATAGAAA 15161 36 100.0 30 .................................... ACTAGCAAAAGAATTTACTACTATCACTAT 15227 36 100.0 30 .................................... TAATAATGTAAGCTAATTAATAAGAAAACG 15293 36 100.0 30 .................................... AGCGCCTAAAAGAGCTGCAGTAATTTCAAT 15359 36 100.0 30 .................................... TAAAAGTTGCTTTTTCTTTGATAAAGCCTG 15425 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 43 36 100.0 30 GTTTTAGAAGGTTGTTAAATCAGTAAGTTGAAAAAC # Left flank : CACAAGATTGTCTTAATTCTTATCTAACTAAAATTATTTCAAATTTATTTGAGAATATAAGTGAAAAGCATCGGAATAGAATATTTGATAAATGGAGGCAACTTAGCACCGATATTCAAGATATAATCTTTATGACTGACTTACCAATTGAAGTCAATGAAAATGTAGATTTAAAAAAGTTATTTAAATTTGATGGAATTCATTTTGATGATTCTGTACTAAGTGATCCTTATGCTATAATTGAAACAGTTGTTAAAATTCATATTGAATGTAAATTGAATTCGGTTGTTACTTTTGCAAATGTAAGTCATTATCTTACAAAAGAACAACTGAATAACTTAATTACCTTTGTAAAAGAATTAAATGTACCTTTGATATTAATGGAATTTTCATCTCCGAATTTTAAGGTTGTTAGTGGGGATTCAAGAGTCTGTTATATTGATGAGGATTTTGTCGACTGGTACTGATTTACAATCTGAGAAGCTGATGATAAAACGTCG # Right flank : CTGTTAAATTTAAAACTACGTATAACAAAAAGTTTTAGAAGGTTGTAAAACACTATAACTTATAGGAGATAAAAATGGAAGGTTTAGTATATGTTATTCTATTTATAGGAGCTTTTATATATTACTATTGTAAAAATAACCGTAAAAAATAATATGTTTTTAAAAGTTAGGAATTATCAATTTAACTCTGTATTGACTATAATTATTTTGAATGATAGCATAGCAAGAAGGGAGCTAAGCCTAGCTCCTAAAAAATTATTATTTAGTCATTTTATAAATTACTAATAGTTGAGTGATTATAATCAGTAATTTAATAACAATGTCTAAGCAGTCTTTTATAACGGCTATTCTATAGCCGTTTTTATTTTTGTGCTTTTTGTTTTAAAAGACTAGCGAATCCATGATTTAACGAACTCCGCTATTTGTATAGCGGAGTTATTTTTTCCTCTCAATTTAATACAAGTACCAAAGAACTTTGAAAATAATAGCAATTGGTCTAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAAGGTTGTTAAATCAGTAAGTTGAAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: F [matched GTTTTAGAAGGTTGTTAAATCAGTAAGTTGAAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.20,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [60.0-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.27 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //