Array 1 97889-93961 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAFCV010000004.1 Klebsiella pneumoniae strain 7-22 NODE_4_length_346848_cov_66.969464, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 97888 29 100.0 30 ............................. CTCACGCTGATACCTCGGAAAAAGACGGGC 97829 29 96.6 32 .G........................... GCGGGCTGGGTTTTGTCGACTCTGCCGATCCG 97768 29 100.0 32 ............................. TAATATTGATAAATTCGATGAAGTAACCGGAA 97707 29 96.6 32 ............................A TCGAAGTACCAGCGCCGCACCGTGTTTTTTGC 97646 29 100.0 32 ............................. GTGGCCGGTGCTGCCAGTACGGTTACCGAAGT 97585 29 100.0 32 ............................. CATCCACGCTTCTGGCCACCAGGCAGATAATC 97524 29 100.0 32 ............................. GTGCTCCTCTTCCAGATACTGGGCCAGGAGCT 97463 29 100.0 32 ............................. TACAGGACGACAGCATCCTGGAACATTTCGAC 97402 29 100.0 32 ............................. CTCTGCGTGTGCGCCTCCGCTACGAGGTGACG 97341 29 100.0 32 ............................. TGAATATTCATTTACTAAATTAGAGACAATTC 97280 29 100.0 32 ............................. CGGATTAAACGTAAGGCCGCGCGCTGGCGTAA 97219 29 100.0 32 ............................. GTGGTTTGTTACCGTGTTGTGTGGCAAAAAGC 97158 29 96.6 32 A............................ GAACGGAGGAATATAAGAACAAAAGCCCGCAG 97097 29 100.0 32 ............................. TAAACCGCTGGCGTGGTCAGTTGCGTGGCGGT 97036 29 100.0 32 ............................. GGCGCCGGCCTGATCACTATCGGGTAACGGTG 96975 29 100.0 32 ............................. GGCCTGAACCAGAGCATGATCTACACCTGGAA 96914 29 100.0 32 ............................. ATTGGGTAGAGCAGGCGAACGGATGTCTTTTT 96853 29 100.0 32 ............................. TTTTCACGGTCGAAGTTGTGCATGCTTTCTGC 96792 29 100.0 32 ............................. TCGACGCCCCGGTGTGGGAAGACTTTGGCACC 96731 29 100.0 32 ............................. CAGCGCATACGGGTTAAACCGGATCACCTCTT 96670 29 100.0 32 ............................. ACATAGCGCCCGATACGCAGCGCCAGCGGGTA 96609 29 100.0 32 ............................. GATCGATCGTTATTGTTGAACCGCACTATGGT 96548 29 100.0 32 ............................. CTTTTAATAATATCATCGGCAATGTCCTTATC 96487 29 100.0 32 ............................. CGGGACCGGATCCGCGTGGGCGACCAGGATTA 96426 29 100.0 32 ............................. CACCGATATTCAGTGCGCCAACGCCATAGCAA 96365 29 100.0 32 ............................. CCGAGGTTTTTCATACCTTCGGCAGTCGTAGA 96304 29 100.0 32 ............................. CGGAAATTTTGATTAGTTGAATCTGTGCCATT 96243 29 100.0 32 ............................. CCGACTTGGGACGAGGATCCGGCGGAATGTCG 96182 29 100.0 32 ............................. TAATGGCAAAACCATGACCTGATCCGGGCGTC 96121 29 100.0 32 ............................. CCTGAATCTTCACTTCGTCGATCATTCTGCGC 96060 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 95999 29 100.0 32 ............................. GTAACGCAGACGGCGAACGTCGGATCCATTGG 95938 29 100.0 32 ............................. GACCAGAAAGCCTGGGCATTGTTCCGCTCATT 95877 29 100.0 32 ............................. CCCCCGGCCGCGTGGCCGATTGCCATTACCGC 95816 29 100.0 32 ............................. TATACAGTATTATCATAGCGAATTCCCATCGG 95755 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 95694 29 100.0 32 ............................. GCACCAACGTTTACGGTGCGGTGGTGAAACAA 95633 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 95572 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 95511 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 95450 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 95389 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 95328 29 100.0 32 ............................. TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 95267 29 96.6 32 ........T.................... ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 95206 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 95145 29 100.0 32 ............................. CTGCAGGTAAATGACTGGATGGGGGAAGAGGT 95084 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 95023 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 94962 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 94901 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 94840 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 94779 29 100.0 32 ............................. TCCCCTACCACCCACTGAGCAAACTGGTAGCA 94718 29 100.0 32 ............................. CAGATACCAACGGTTACTACGGCAATCAGCAC 94657 29 100.0 32 ............................. AAGGTTGACCTGTTGTCGGCAACCATCGAGCC 94596 29 96.6 32 .........A................... GAGGCGCGCGTTGTCGTCGGTGAGATGCGCGA 94535 29 96.6 32 .....A....................... GCCATTCGTGCTTCTTCGCTTTGCTGCATCCA 94474 29 100.0 32 ............................. GAATATAAAACCAGATTCCATATAGCCCTGTG 94413 29 100.0 32 ............................. CCGGTTACGGGGATGACTGCAATTCGCTCCTG 94352 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 94291 29 100.0 32 ............................. GCGGCGTCAGGTGTGTGGCAGAAAATTATTGC 94230 29 100.0 32 ............................. TCGTCTGAGTTCCGGCTTACGCCGTGCCGACA 94169 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 94108 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 94047 29 96.6 29 ............T................ GGGTTCACTTGGGTGAAACTGAACTAACT 93989 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 65 29 99.3 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : AGGTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTA # Right flank : GTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGATTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [11-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //