Array 1 6376-6543 **** Predicted by CRISPRDetect 2.4 *** >NZ_QSPK01000027.1 Eubacterium sp. TM05-53 TM05-53.Scaf27, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ======================================= ================== 6376 31 100.0 39 ............................... TTTACCTCATCCGATGCTGTGTTGACGTTTTTCCATTTT 6446 31 96.8 36 ..A............................ TTGGCATATTCTGCCATACGGGCAGAGTGTTCCTCT 6513 31 96.8 0 .........................T..... | ========== ====== ====== ====== =============================== ======================================= ================== 3 31 97.9 38 GGGAAATATGATACTTATAAAGGATCGACAC # Left flank : AGGTGTTAAATACTTCAATATAACATATAACTTAGGATATGATTTATGCGACTGGGATCCAGATCATCTGCATGACTTAATCACTCCAGAAACAACGGAAGAGGAGTGGCAAGCGTTACTTCCAGGTATGATGGAAAACCAGCCATGTGTAGGTACCAAATTGAGTGATCACTGTTATGCAAATGTCACTTGTAGAACAGGAGTTCTACATTGTACAAGTTATGATCCTTACGAAGATGCACTACATGTTTGCGAGTGGCTTTGATTGCTTTATTTCTAGATGATTATTATAATACTTTTAAAACACGTGTTTGAATCAACTGAAAAGTACCGTATGTTATAGAAAATACACTTAAATTTTCGACCATCTCCCTAAAACGAGCCGATTTTAGCACTAAAAATAGTCAAAAAAAATTGAGATGGTCGAAAAATAAGGGCTAAAAACATCAAAAATCACAATGTTTTGACACTCGACAGTCAAAATGTGCTATATTTACTAG # Right flank : CCAGTGTCGTTATCGTCATCGTCGTAATCGATGCAGCCTCTTGAAAAATATGATGTTAATGGCTTGTGATTGTATGCTGCTTAATATATTTAGGTACTGTTGGATTATCTGATACCTCTTTATTGAAAGTGTCTGGAAAGATTGTGCAGTTAATTGGAATTGGGCGTTTTCAACACGAAGTTCGATTCATGCTAGATAGTCAAAGTAAAAAAGTCCTGAAGAAAATTTTAGGACTTCTTTTTTTTAGGATGTTAAATGCTTCAAAGTAATATGTCATTTAGAGTGTGAACAGTGCGACTGAGATTTGGATTATCGGTATCTGTTGTTTTGCTTTAAGATTGTTCGGCAATAATTGGTTGTAGAACAGGGGATTACATTGTTACATTTCATGTTGCTGAGTGGCTATAATTGAATTTATGAAAACTGACTCTTATCGGTCTATATAGACTGATGGGAGTTTTTTAATGTTTAGGTTAATATTCCTTCTTTTTGATACATAT # Questionable array : NO Score: 2.57 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGGAAATATGATACTTATAAAGGATCGACAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.50,-0.80] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0 Confidence: HIGH] # Array family : NA // Array 2 20138-21145 **** Predicted by CRISPRDetect 2.4 *** >NZ_QSPK01000027.1 Eubacterium sp. TM05-53 TM05-53.Scaf27, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== =========================================== ================== 20138 31 100.0 39 ............................... TGTATTTGAACACAACCTTTTCTTCTAGATTGAAGAATA 20208 31 100.0 35 ............................... TATTCTTTGACATCTTGCTCGGCGTCAGTTTTTTT 20274 31 100.0 37 ............................... TGATCTACTATACGACCATTATAAGTTGCTTTTTTTG 20342 31 100.0 37 ............................... CAGAATTCTCCAGCAGACACTGACTTTAGTTCCGTCA 20410 31 100.0 38 ............................... GATGGAAGAAGTCGCATTATCTAATGATATTTACAATA 20479 31 100.0 40 ............................... TCAAGTTCATCGTAAGGCATTACGTAATAAATCTTTTTTT 20550 31 100.0 40 ............................... TCGTCTACGGTTAAACGAAGTACGCGTGTTCGTGCGTCGT 20621 31 100.0 39 ............................... TTACGACCATACTGCGTGTGAACAAGCCTTTTTGGCTTT 20691 31 100.0 39 ............................... TAATCCACTGCATCACGAGCAGCACACCCATTATCACAA 20761 31 100.0 43 ............................... ATACCTTTTACAGCCTCACGTAAGTCAATAGTTAACAACGACT 20835 31 100.0 39 ............................... TAACCATTATAGTTATACGCCTGACTTTGCGGTTGCTGA 20905 31 100.0 41 ............................... GTTTCTAGTTCCATAATGGAACCTCCTTTCCGACCCTCTGT 20977 31 96.8 42 ...G........................... TGTTAAACATATATATTTGAAATTACCGTCTGTATATACATC 21050 31 100.0 35 ............................... AAGCGTTGCATAGCTGTTTTTAAGCCAGGCTGATG 21116 30 77.4 0 ..................-...A..TT.ATT | ========== ====== ====== ====== =============================== =========================================== ================== 15 31 98.3 39 GGGAAATATGATACTTATAAAGGATCGACAC # Left flank : TAGGACTCCATTTTTGAATTCATATTTGTATTCAATAAGAAACAACATGCTCTAAATCAAGCACATAATGGAACTATAGAATTACGGAACCTACAATGATATTAATTGGGTAAAATTTGAATGTATATTAGCACGAATGATTCCGTATATACAGACATATAAGAATGGAGGGAAAATAAAATATGAATGATGCGATTGTATATTACAAAGTTGTGAATACACTTTTATTAATTATTAATTTCATGATGTGTCTAACACTACGACATTATTATAAACGCTTAGAGACTATGACCAATCTTGATAAATAATGGATGTAATTATTCAACCTAGGTAATCGTAAGTCAAAAAGTAGCTAAAATTTTCGACCATCTACCTAAAATGAGCACTTTTTTCTTAGAAAATCAGACCAAAAAAGCGAGATGGTCGAAAAAATAGGCCAAAAATCACCCGATTTACACCATTTTATTTAATAAAAGCCAAAAATGTGCTATATTTACTAG # Right flank : TGATTGAATACTAGAAATAGTATTCTTTTTTTGTTTTCTTTGTTTTCTTTAAATTTATTTATGCTTAGGTTAATTAATTCCTGTTCCTTTACATATAGAAATGAAGGAGGGGATAAGATGTTTGTTAATGTATCAAACCATCCAAGTGAGTTATGGTTGGATGATCAAAAAAAGAGTGCAATGCAATATGGTGAGGTAGTAGATCTTGCATTTCCTATGATATATAAGGGGTATGACAGTATTAAATATGATGAATTGGTTGAATCGTATTATGAAAGAATAATGGATCTTTGTCCTGATGTTGTGATGGTTCAAGGAGAATTTGTCTTTACACATAGATTGGTGAATAAATTAAAGAATAGCGGTGTAAAAGTGGTGGCTGCTCGTAGTGAACGTAGCAGTTCAGAGTATAAGGATGAGAATGGTGTAATTCATAAGCAGAGTACTTTTGAATTTATAGATTTTGTAGAATATTAATTTTTATATTTAGAAACATGGTT # Questionable array : NO Score: 3.17 # Score Detail : 1:0, 2:0, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGGAAATATGATACTTATAAAGGATCGACAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.50,-0.80] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [73.3-83.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA // Array 3 31394-31913 **** Predicted by CRISPRDetect 2.4 *** >NZ_QSPK01000027.1 Eubacterium sp. TM05-53 TM05-53.Scaf27, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ========================================= ================== 31394 31 100.0 40 ............................... CCGCAAGCTTTATCTCTTCGTTTTTCAATCTTTTCAATCT 31465 31 100.0 39 ............................... GATGATAACCTTTTTTTTAAGGTTGATTTGGTTGGCATA 31535 31 100.0 41 ............................... CTGTGCTCCAGCATAAGTTGTTTCGAATGCCATATATATTT 31607 31 100.0 40 ............................... CCGATGAAGAACACTTCCTTTAAATTAGATTTTTCCATAT 31678 31 100.0 38 ............................... GATTCAACTGGACGATAATAGTCCACAAACGCCACCTG 31747 31 100.0 38 ............................... ACATCTTTTGTACACATTCATGTACGGGTCGATATACG 31816 31 96.8 36 ............................G.. GGACATTTTTTCATATATCTTTCTCCTTTTCTCGTG 31883 31 83.9 0 .........................TT.TTG | ========== ====== ====== ====== =============================== ========================================= ================== 8 31 97.6 39 GGGAAATATGATACTTATAAAGGATCGACAC # Left flank : GAATTGGATGATTTAGTCTTGGAATATTTTAATAAAATACAAGAGTATTCTGATGCTGTTGTAATGGTACAAGGAGAATTTGTTTTTACATATCGTATGATTGTGTTATTAAAAAAACAAGGCATTCGAGTGGTGGCTGCACAAAGTGAAAGAAAATCAGTTGAATTTGTAGATGAGAATAAGAATACGTGTCGTGAAAGTGTATTTGAGTTTATTAGATTTATGGAGTATTAGATAGTAACTGTAGCAATGTACACTTTTAGGCTCGCAGGCCCGGTCTATTTGTCAAAGAGATAAAGAAAAAAAGTAGTTTAATTCAATCAGCTTAGTTATTTGATTGATAACCAAAAGTCTTGATTTTTCGACCATCTACCTAAAATGAGCTGTTTTGAGCACCGAAAATAGTCAAAAAACACGAGATGGTCGAAAAAAACAGGCAAAAAACCTCTGATTTACGTCATTTTGTTTAATGAAAGTCAAAAATGTGCTATATTTACAGG # Right flank : ATATTGAATACTAGAGATAGTATTCTTTTTATGTAAGCGTCAAATAGGACCCATATTAAAAGAACGATCTCTTTGTGAAATAATAGAGCC # Questionable array : NO Score: 3.14 # Score Detail : 1:0, 2:0, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGGAAATATGATACTTATAAAGGATCGACAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.50,-0.80] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //