Array 1 5657-2649 **** Predicted by CRISPRDetect 2.4 *** >NZ_KI912148.1 Fischerella sp. PCC 9605 FIS9605DRAFT_scaffold1.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================================== ================== 5656 37 100.0 34 ..................................... CAAGAACGTGAGGGATTGTAGCCAAGTTTAGATA 5585 37 100.0 34 ..................................... ATGCTGGGTGATGTCGAGGATGCTTTCAAGATGG 5514 37 100.0 34 ..................................... GGCGGGGATTGCTGGAGCGAGGCAGAACAGAAGG 5443 37 100.0 36 ..................................... AAGCTAGGTTGTGGGGGCATCCAAAAGCCTTAGATG 5370 37 100.0 34 ..................................... AACACGCACTTTCTCCTGAGTGGCACGAACGGCA 5299 37 100.0 34 ..................................... AAAATCCTGGCTAACCGCTATCCTGCCAAGGAAA 5228 37 100.0 33 ..................................... CCCAAATAACCGCAGACATGCGCGAGGGGACAA 5158 37 100.0 36 ..................................... TGCCCTTTAGGGCTAGTAAAGGTATTACGTTCCGCT 5085 37 100.0 35 ..................................... CGATTTAGTAGTCATGGGGGTGGACTGGGGGGATC 5013 37 100.0 34 ..................................... CTTGGCAAGTCTGGCAACCCAAGACTCAGAAGTG 4942 37 100.0 37 ..................................... AGCTTTTTTACTATACTGCCCTTTACTATCCTGCCGT 4868 37 100.0 34 ..................................... AACCTGGATTTCTCACGGGCGGGGAACGGGGTTG 4797 37 100.0 39 ..................................... CCAATCCATTGTTAACAGCGGCGAGAATTCCAAAGCCCC 4721 37 100.0 35 ..................................... TATCGTACAGAAATAACAAATATAATTATAGAAAA 4649 37 100.0 35 ..................................... TGCTATTCATCCTAGTGGGGATTCCTGGATGAAAG 4577 37 100.0 35 ..................................... TCCATCTATTACTTTTATCACTATTGCACTATACT 4505 37 100.0 36 ..................................... AAATGTGGTGTAATAGGTGAACCATATACTACTACT 4432 37 100.0 34 ..................................... ACTTAACTTCGTATATATCTTGATCTACACCTGT 4361 37 100.0 33 ..................................... CCACTCCAGCCTTAATACTCCATTAGTGCAATT 4291 37 100.0 35 ..................................... ACGCTGAGTACACTGAATTAAGAAAAAGCATTAAT 4219 37 100.0 35 ..................................... CAGGCCCCCCTCCATTCCCGCTTCACGTCAGGCCT 4147 37 100.0 38 ..................................... CCGGGGGCTTCAAAACCGAACCCGGCAAGATGGGCAAG 4072 37 100.0 39 ..................................... TCTGAGCAAGCCGGCGCGCTAACAATAAAAGCTAGGGAT 3996 37 100.0 34 ..................................... TATGGACTACCACGGAGAACCTAGTCTACGAGGC 3925 37 100.0 35 ..................................... ATGGACAGGGCAGCTGACCATAAATCCCCCCTAGC 3853 37 100.0 35 ..................................... CTACGTGTACTACACTAATGGGGTTTCCTATGGGA 3781 37 100.0 36 ..................................... TACTGGATATCCTTAAGGGGAGGTAAGGTGAATAGA 3708 37 100.0 34 ..................................... TCATCCTAGCCCTATGCGTAGACATGATGGCATC 3637 37 100.0 32 ..................................... CCGTCACTGGACGATGTGCAGATAATCTTTGG 3568 37 100.0 34 ..................................... AAAACATTATTGGATAAATGAAAGCAAATATAGA 3497 37 100.0 39 ..................................... GGCGCAATTTGCGGACAATACAGCGATGCAGCCGAAGGG 3421 37 100.0 46 ..................................... GCCTAACAGATTCCAGAGCACCCTTGGGTGCCGCAGGAGGGGTTGA 3338 37 100.0 35 ..................................... TTATCCTCATAAAGAATAGTTAATGTAATTCCATA 3266 37 100.0 35 ..................................... ATACTATTAACTCCTCCATCAGGAAACTTAAATAT 3194 37 100.0 39 ..................................... GGCTACAGTAGCCAAGACCTCTAGAGGGGATGTAGCAGA 3118 37 100.0 35 ..................................... CCTTCTTCTACCCAGTAGGCACCGTAGACCCTAAT 3046 37 100.0 34 ..................................... AAATGCCTTAGTGGTCGAGGCACTAACAACACGG 2975 37 100.0 38 ..................................... TTTTGGTTGACATCCTCACTGGGCTAAAGCCACGGTGA 2900 37 100.0 34 ..................................... ATTAGTCTTGCTTGACTAATGACCGATGACGCTT 2829 37 100.0 36 ..................................... TATTCTTAAGCACTTAGCAGCAAAAAACCCGAATGT 2756 37 100.0 34 ..................................... ACGCAATCCCAATTTAGTACTAATGTCAAGGTAA 2685 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ============================================== ================== 42 37 100.0 35 GTTGAAATTTCACTTAATCCCTATTAGGGATTGAAAC # Left flank : ATGAATGTTGTTGTATCCTATGATATCTCTGAGGATAAACGCCGTACAAAGATTCATAACATCCTCAAGTCCTACGGGCAATGGGTGCAGTACAGTGTGTTTGAGTGCCAGCTTAGCGACACGCAGTATGCAAAATTGCGATCGCGCTTGAACAAGTTGATTCAACCTGATACTGATAGCATCCGCTTTTACTTTCTCTGCGCTTGCTGTTTTGGTAAAGTTGAACGTATCGGTGGTGAACAGCCTCGCGACAACACAATTTTCTTTGCTGAATGCGCGGATGGGTAGGTGTTGGCAAACAAGCTTTGGGAAAAATGGCTGAATTGTTTTTGGTACAAGGGTTGAGGGCGATCGCACTACCTCACCCATCCGCGCACCTTGTCTGGACTGGGTTTCAGCCATTTTCACCCTAGACAATCCTAATTTCTCATGCTATGATTGACCCATCCGCGCTAACGAACCTTGAAAATCGAATATGTGTTGGCTTTCGGGCTACCGCA # Right flank : TTTTGATTCAGACTTTTGAACGCGATCGCCCCTAAGTACAAAATTTCGTAAGTTCATAGCGAAATGTTTGCACAAAGACTCTGCGCCCCTCTGCGTCTACTCCGCGTCCCTCTGCGTTTCAAATCGCTACTTTTTCATACCTGGCGGTGAAACTTGTTTCATAGGGACTGCCTCCTCCCTTTTGCCTTATTTTCTCAAAAATAGCGATTAAGCTAGAAATTAGGAATATAAATCAGGAGGCAAAATTGAACGGCGCGGTTCACTGGCAACAACGAGTAGGCAATCAACGAGACTGGGTTTGGCGGGGTTGGCAAACTCGCTACACTTACATTCGTCCGATCCAAAATCACCAACAGACAACACCCCTGATTTTGCTACACGGGTTTGGTGCTTCTATTGGACATTGGCGACACAATTTAGAAGTATTGGGGGAACAGCACACAGTCTACGCCCTTGATATGTTGGGTTTTGGGGCTTCAGAAAAAGCTTGCGTTAATTAC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAAATTTCACTTAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.50,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [61.7-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,4.5 Confidence: HIGH] # Array family : NA // Array 1 215555-218281 **** Predicted by CRISPRDetect 2.4 *** >NZ_KI912149.1 Fischerella sp. PCC 9605 FIS9605DRAFT_scaffold2.2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================== ================== 215555 37 100.0 35 ..................................... AAATCGTTGGGTTTACGAAGCTAGGTGCTTTGATT 215627 37 100.0 41 ..................................... CTTTGAGCTGACAGAATAAAAATTGTTTTTTGGTGAATCAG 215705 37 100.0 34 ..................................... CTATTACCGCTAACTATCCATGTGGTAATTTGAT 215776 37 100.0 42 ..................................... AGCTAGTAGAGGCACAAAACCAGATTGCAAAACTAGAAGAAA 215855 37 100.0 34 ..................................... ACTCTAGGGGAATCTTACCGGGGCGTGGTGGAAC 215926 37 100.0 33 ..................................... TGGCTCTATCAGGTTATGCTCAGGGATGCCCGC 215996 37 100.0 34 ..................................... TGCTCATCCGTGTATTTGCGCTGATTCAGTTTTT 216067 37 100.0 36 ..................................... CTTCAAAGTCACAGAGAAGATACAGTCCCAACTAAA 216140 37 100.0 33 ..................................... ACAACAGAGACCATGTAGTAGTCAGGGTCGGCA 216210 37 100.0 34 ..................................... AAGATGGGACTCCGGGGAGTACCCAGTGCTAATA 216281 37 100.0 35 ..................................... GCAAGTAGCCACTAGGGGTTCCCAGATGACTTTGC 216353 37 100.0 34 ..................................... GAGGGTACCAACAAGCAGGTAGGTCGGACCTGAT 216424 37 100.0 39 ..................................... ACCTTTACCAGCAAGAGAATCACTTAGAGACTTACTAAG 216500 37 100.0 37 ..................................... AATACCAATAACAGATATTAAAATACCTAAAATACAA 216574 37 100.0 40 ..................................... CTAAAATATATTGCCATTGATTGGAAGAAACAAACATGGG 216651 37 100.0 35 ..................................... TATTGAATGACAGTATTGTAAATAATAAAGGTAGT 216723 37 100.0 35 ..................................... CTTTAGCTGGAGATTGGGGAGGTGCAGCAGTAACT 216795 37 100.0 36 ..................................... GCTCCTTCATCAGAACTAGCATCAAACACCGCTAAA 216868 37 100.0 33 ..................................... GAAAAAATCAGTATGTCAACTGAAACAGTTGCG 216938 37 100.0 35 ..................................... TAATAAAGAGAAATAACTTATTTATTTAATGAATG 217010 37 100.0 33 ..................................... TATCAGCTTATTTGGCAAAGATACGGTTTATTG 217080 37 100.0 38 ..................................... GTCGCCGGGCTAATCCCGGCATATGCAACTCCATTATT 217155 37 100.0 34 ..................................... ACTGTGACCTTAGGGCAGAATGAGAAATCCAGTA 217226 37 100.0 35 ..................................... AAAAAAAGATGCAATGTTAGACAAACAAATTGAAG 217298 37 100.0 38 ..................................... AATAAGAAAACCCCTAGGTAGCCCTAGGGGTTCCTAAC 217373 37 100.0 37 ..................................... GCAGGGATAGAAGATTGTAATATCCAATCCTCGGATA 217447 37 100.0 33 ..................................... CATGTTTACCGGCACGCCTAACAAGCTACTCAT 217517 37 100.0 35 ..................................... CCTGGGTATGATAAAACGGGTACCTGGATGGACTG 217589 37 100.0 38 ..................................... CCCTGATAACCCTAGTTATCAAACAGAGGGTCGCCTAA 217664 37 100.0 33 ..................................... TCGCGCCACCATTTATCCGCATTGATGAAACTC 217734 37 100.0 34 ..................................... TTCGTAGATAGTACTTAACCAGACTAAATCATCC 217805 37 100.0 36 ..................................... TAGTTTCTCCCATTGCCAAGAGTATCCCTGCTGCAC 217878 37 100.0 36 ..................................... AAATCCAACAAACCTGTAAGAGGTAGTGGAGGTGGT 217951 37 100.0 35 ..................................... AACGGCTGAACCATTGCAGGAAGAACTTAACTCGG 218023 37 97.3 39 .................C................... GGAAGTCTTGCAACAGCGTAGTTGCGCCGACCGAGGCAT 218099 37 100.0 34 ..................................... TTGTAGCCGGATGGATAAGCCAACAGCGGCGAGG 218170 37 100.0 38 ..................................... CTCTGGCAAGACTTCATCAGGTTATGACATCTACCCAG 218245 37 89.2 0 ...................T...C...A.....G... | ========== ====== ====== ====== ===================================== ========================================== ================== 38 37 99.6 36 GTTGAAACTTCTATTAATCCCTATTAGGGATTGAAAC # Left flank : GGGTGATGGGGAGTAGGAGAGGGGAGGAAAAGCAATGAGTATTTTTACTATGGAGGAGTATTTTTCTGAGATGGGGTGATGGGGAAGCAATGAGTATTTTTACTATGGAGGAGTATTTTTTTAGTTTTATTAGTTAATACGGTAAAGACCAGAAAAATCTGAGACTATAAATAAATGATTAGTACAGTGTTGCGATCGCACTTATAAATAAATGTTGATTCAATTTCAGATCGCATCTGCTTTGACTTTATATACGGCTTTTTGTTTACCGGATGCGCGAATGGGTAGGTGTTGGAAAAGAAGTTTCGGGAAAAATGGCTGAATTGTTTTTGGTACAAGGGTTAGGAGCGATCGCATTACCTCACCCATCCGCGCTCCTTATCTGGGCTGGATTACAGCCATTTTCACCCTACTCAATTCAAATTTTTCATGCTATGATTAACCCATCCGCGCTAATGAACCTTGAAAACCGAATACAGACTAGTTTTCGGGCTACCGCA # Right flank : CCTTGATTTTCTATCCTTTCCCCCCTGTAAAAGTCACACCTTGAATAAAATACCGATTGAAAAAGGCGTAAATCGCCAAAGCTGGCAAGGTGAACACCATCGAAGCTGCCATGATGTAATTCCAATAACTGATATATTGACCTTTGAAGCTGTTCAGTCCTAAAGGCAGGGTAAACATTTCTGGATCAAACAAAATAACCACGGGTAGCAAGAAATTATTCCAACTACCCATGAACACAAAAACCGCCTGTGCTGCTAATGCTGGTTTCGCCAAAGGTAAGACAATACGCCAGAAAATGCCGAAGGGTGTTAAGCCATCTAGTGCAGCAGCTTCCTCTAATTCCTTGGGAAAGTTGACAAAAAACTGCCGCATCATAAAGATGAAAGTGGCATTAACCATACTAGGGACAATCATGCCTTGGTAAGAATTCAGCCAGCCAAAGGCTTTCAATATCAAAAATGTCGGGATTAGCGTTATTTGTGCTGGTACTGCTAGTACT # Questionable array : NO Score: 9.24 # Score Detail : 1:0, 2:3, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAAACTTCTATTAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.20,-7.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.64 Confidence: HIGH] # Array family : NA // Array 1 222720-224635 **** Predicted by CRISPRDetect 2.4 *** >NZ_KI912150.1 Fischerella sp. PCC 9605 FIS9605DRAFT_scaffold3.3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================== ================== 222720 37 100.0 35 ..................................... AAATGTACCTGCATTCACCAAATTAAATCGGAAGT 222792 37 100.0 35 ..................................... AGCGAAAAAGAAAAATCTTGCCCCGTTCCAGCGTA 222864 37 100.0 33 ..................................... CCCTAATTCCCGAATCATTCCCCCAACGAGGTT 222934 37 100.0 35 ..................................... ACCCATCGGAAAATCCCGTAATCGTTCGTTTCAGG 223006 37 100.0 34 ..................................... TGCAAGCGAAAAGCATAACAGCGGAGAAAAGGAA 223077 37 100.0 35 ..................................... CATTCAGTACCTTGATGGTAGAACTCGTAGGATAC 223149 37 100.0 35 ..................................... GAGTCGCTCGCTGCCTTCCTGAGTGCCTTTAAGAA 223221 37 100.0 34 ..................................... ATAAAATCCATGATCTGCAAAATCTCCATCAATT 223292 37 100.0 34 ..................................... ATTCCGTACAAGCCACTTTAACCACCATCCAGGA 223363 37 100.0 34 ..................................... AGCCCAGAGACTACCGAGACCTTCAGACCATTAG 223434 37 100.0 35 ..................................... TCCTGAGGATGCCTCCCGATAGATATATTGGTATC 223506 37 100.0 36 ..................................... GTGAGAAAGGAATACGGCAAAGATGCCTTCAATCCG 223579 37 100.0 35 ..................................... GCACTAACCTATACGACCCCTCACATTATATTGGG 223651 37 100.0 34 ..................................... CAGGAACAAAAAGCCATTAGGGTAGCGAAAGCAG 223722 37 100.0 39 ..................................... CAGCTTAAGAGAGTATGGTATCCCCCTTAGAGGTAGAGC 223798 37 100.0 36 ..................................... ATTTCTCCTTCGAGATGAAGGAGAATTTCATTCAGT 223871 37 100.0 33 ..................................... ATATACTTCTAGGAAGAAGCCTACCTCCTCAAA 223941 37 100.0 33 ..................................... ATCAACTTTTAAAAAGCTCTCTCAATCATCAGA 224011 37 100.0 34 ..................................... CCTGATGACTGGCCGCATTGAGGATCTGATAGTT 224082 37 100.0 42 ..................................... ACAGCGCAAAATCAATAGTATTTTTGTTGGCAAGCGAGGCAA 224161 37 100.0 33 ..................................... TTCCAAATGCCATGCCTGGATAAGCGGTTCTAA 224231 37 100.0 36 ..................................... AATAGGTCTGTAGTCTGTCTGCAGACTACAGCAATG 224304 37 100.0 39 ..................................... AGCGGCTTTTATCGGGGTATCGGGAACGGGGTAGAAAAA 224380 37 100.0 37 ..................................... CGAGGAAAGAAAGGCTTCTTCCTCGGCTTCTGGGGTA 224454 37 100.0 36 ..................................... GAATGATTTATTTCTCTAAAGTGCTGAACATACGAG 224527 37 100.0 35 ..................................... CGTCGCTCTCTTTATTAAGTGCTTTAGTAGCACTT 224599 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ========================================== ================== 27 37 100.0 35 GTTGAAACTTTATCTAATCCCTATTAGGGATTGAAAC # Left flank : CTCGCCTATGGCTATTTTTCGGTTTTAGGAAACCATAAATAACCTATAAACGAATATTCATAGATGAAGTTGCACCCTGAGTCTGTTGAATCTGATAAGCAATACTCTGTAATTTAAAATCAAGTTTATTGAGAATTAGTACTAATAAGCAAGCATATTTACAAAACGTAATATTTTCTAGGCAACTTGGCGTGCGATCGCACTTGCAGTACTTGCGATTCAGCCTGATGGTAAATTTGTATGTATCACTAATGAAATGCTTGCAAAGCCAAATGCGCAGATGGGTAGGTGTTGGAAAAGAGGTTAAGGCAAAAATGGCTGAATTGTTTTTGGTATAAGAATTGAGAGCAATAGCACTACTTCACCCATCCGCGCACCTTGCCTAGACAGAGTTTTAGCCATTTTCACTCTATGCGATCCCAATTTTTAGTGCTATGATTAAACCATCCGCGCTAATGAACCTTGAAAACAGAATACAGATTGGCTTTCGGGCTACCGCA # Right flank : CTTCGGGACGAAGAAGCCAATAATTGTTGTTTTTAATTGCATCTGCAAGTCTCATAATCTTTGTTTAGTACAGACTTGCAGACTTTTTTAGCCTATTTTCTCGCATGTAGCGATCGCTTAAGTAAGTGCCATTCCACCATATAAGGGTAGTAGTGTACATAATTACTACAGCTACTTTTTGTTTACACGTACAGAAATAGCCGTATCAGGATTATCGCTAAATACACCATCAATTCCTAAATTAAAAAACAATTCATACTCCCCTTGAGGGTTTCCTTGCAAGTCCGGTGGCAAAAAGAAATCTTCATTTCGTAAAGTCCAAACATGAACCAATAAATTAGCCTTATGAGCATTGCTGATTAAAGATGTCGGCGACAGCAATTTACCCTCACTATCTTTAGGTAAAAGCAGGTTTTTATGAATACCGATCGCTTGAGCATATCTAGAAATTTCCCTTAACCCTTCCGCAGTTGCTAAATCCACATAAGTACGCTCATCAC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAAACTTTATCTAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.20,-7.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [53.3-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.64 Confidence: HIGH] # Array family : NA // Array 1 626118-627968 **** Predicted by CRISPRDetect 2.4 *** >NZ_KI912151.1 Fischerella sp. PCC 9605 FIS9605DRAFT_scaffold4.4, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================== =========================================== ================== 626118 34 100.0 35 .................................. ATTGTGGTGTTAAATTACCCGTTAGAGATCGAATA 626187 34 100.0 38 .................................. TCTAAAGCCTCGCAGAGCTTCAAAATTGTCTCATGGTG 626259 34 100.0 36 .................................. TGGGTTAGTTCAATCTCAAAAAATTAAACTTCGACA 626329 34 100.0 34 .................................. AAAGAGTGAAAAGAAGGAAAAGAAAGAAGAAAGA 626397 34 100.0 35 .................................. TGGGATTACAAAACATGTAATCTTGCATCTCTATT 626466 34 100.0 42 .................................. TCTATTGCGTTGATGATTAAACTCAGACGCCCCAAAAATACG 626542 34 100.0 40 .................................. AACGCCAGAACCTTCAGGGTACTGATGATCCTCGTGAACA 626616 34 100.0 39 .................................. TTGACAATTGATGACATGCCGCTCTTTTCCCAAAACAAC 626689 34 100.0 43 .................................. TTTACTATTTCAGTTGGCATAACAGACTCCAATCCCTGTCCAC 626766 34 100.0 42 .................................. TAATTGCGCCGAAAATCATTAAGTATCCTGTAAACTTGGATC 626842 34 100.0 42 .................................. TACAACCTGTTGGTCAAGCTGACTGCACTCATTCAACAAATC 626918 34 100.0 42 .................................. GAACGTTTAACAAAAGAGTACATTCCACCTTCCAAAACGATC 626994 34 100.0 37 .................................. CCCTTAAACCTTCCTAAAATTCTATGAGTTAATGTCC 627065 34 100.0 39 .................................. CAAAATCTTTTTCAGGTAAAACATAGGGAGCTACTGTAC 627138 34 100.0 40 .................................. AGTTTCCTGATTGTTATCAAGCGATAGATAAGCAGAAAGC 627212 34 100.0 42 .................................. TTTATGATTACAATCTGACCCGCTTTGCCCTGGTTTAGTGGC 627288 34 100.0 39 .................................. TGTACTGATCGGTATGTTTTTGTAACCCCCATTTTTTGC 627361 34 100.0 40 .................................. GCCAAACTCCAGCGGTGGGTCTAGCACAAAAAGTGAAAAC 627435 34 100.0 37 .................................. GGTCTCTGTACATAAGGAGGCTTTCTCGGATTACAGC 627506 34 100.0 38 .................................. TTCTGGGTTAGTTTTGGTTTTCGAGAAAGGGTTAAAAC 627578 34 100.0 36 .................................. CAATTTGTTGAAAATTTCCGGATCAGTATTTACGTC 627648 34 97.1 38 .................................T CTTTACCATCTAGAAAACTCAAATCAATTCCATAATCC 627720 34 100.0 38 .................................. AAGATGCTGTTCTCCATTTTTCGTTTGTACATGAACGC 627792 34 100.0 39 .................................. ATACCACTATAGGATTACGGCTAACGATTGTTTGAGAAC 627865 34 100.0 36 .................................. TGCCTGCCATCAAGCCCAACCACGCCACATCTAATC 627935 34 94.1 0 .............A...................T | ========== ====== ====== ====== ================================== =========================================== ================== 26 34 99.7 39 TTTAAACTTCTTCGGAAGTTGAATTAATGGAAAC # Left flank : GGAAGAATGGAGAGCCCAATTAGTTGATTCTCTGGTTGCTTATCTAGTGAACTCTCAAATTTTTACGATTGATGATTTCACTCCACCAGACGAACGCGGAGGAGTATACTTTCAGCCTCATGCACTTAAGAAATTTCTCAAGCAATGGGAGGAAAAGTTACAATCAGAACTAACCCACTCTCATACTGGTCAAAAAGTGCCATACCGTCGCTGTATCGAGTTGCAAGTAAGAGAATACATTGCTTGTTTGATGGGTGAGGTGAAAGTGTATCGTCCCATGATTTGGAAAATGTAAAGAAATGTAAATTTGCGGGGGGTGGGTAATGGCTGAAATACTGATTTTTCGGTTACCCCCCGCAAATCCCAGTCTGGATAAGCGTTTGAAGTGTGTTAGCCCACTGTCTTTTCTCAATAAACCATGCTTTTTGACAGCTAGTATTGACCCCCCGCAAATTTGGGTGTATACAGTTAAGTCAGGGTAAGGTTTTCAATAGCCAAGC # Right flank : TCTTTGAATAGACATTCTTCAAAGATTTTGACATTACAAAAATCTCTAGTAAATTGAGTCGGAGTTATATTCTCCGACTTTTTTATTCCCTAACTTATATACTCGGCAAAATTTATATACAAACTTATATGCAAAAACTTCTTAGTTATACACGAGGTTATATACCCCTTTGAGAAGATGGAATTAAGTCAAAAGTGAAAAGTTAAAAGGCACTCATCAAGCCTTTCTCTTTTGACTTTTTACTTGTAACCTTTTACTTTATTTAATCTATGTCCACAATCTACATCACCGAGCAAGATGTATCGTTCAAAATCCAACACCATTACTTAAAGGTGTTTCATCAACAAAAGCAATGCATCTGTATTCGGATTAGCAACATCAGTCAAATCATCCTCTTTGGTAACATACCTCTACCAAAAGAAGTCGTTAAAACCGTGATTTCTCATCAAATTCCTGTCTTATATTTAACCCAAGATAGTGAATATATAGGCAGGTTAGAA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTTAAACTTCTTCGGAAGTTGAATTAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.59%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.90,-3.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.27 Confidence: MEDIUM] # Array family : NA // Array 2 635366-638375 **** Predicted by CRISPRDetect 2.4 *** >NZ_KI912151.1 Fischerella sp. PCC 9605 FIS9605DRAFT_scaffold4.4, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== =============================================== ================== 635366 37 100.0 36 ..................................... TTGGCTCTATCTGCTGCTAGTATCGGATTGCGGCAA 635439 37 100.0 34 ..................................... TCCAAAGAGGGAACTCTTACACTGCTTGTAATTT 635510 37 100.0 35 ..................................... CATGACCGAATGCAAACCTTAGCCTCAGGCTTCGG 635582 37 100.0 35 ..................................... TTCATTAGCTAGTAGTGTAGAACTACCCGACAGTA 635654 37 100.0 35 ..................................... GTCTTGTAAGAAGGTTGCACGCACTTCTTACTCTT 635726 37 100.0 35 ..................................... GGCAGTTTAGTGAGTTTCCGGTGACGGCTCCTAAC 635798 37 100.0 38 ..................................... GATACGCGCTATTTATCTAACGCAATTAAAAAACTACC 635873 37 100.0 36 ..................................... ATTTCTTTCTGAAGAAGATAAAAATAATATTAGATT 635946 37 100.0 36 ..................................... GCTTAAGAAGAATATATATATATATGTAATGAAGAT 636019 37 100.0 36 ..................................... AATCCGGAAAATCAGAATGAAGCGAATAATAGAGCA 636092 37 100.0 33 ..................................... GCTTTATGTTTAAATACAATTTCCTTACAGTTT 636162 37 100.0 35 ..................................... AGTAATTGTTAATACAGTGATTAAACTACTGGATT 636234 37 100.0 40 ..................................... CTCCCAGGCGGTGACGCATCCGGATTTTGACAAAATCAAT 636311 37 100.0 36 ..................................... TTGGCTGAGGTTCAATCCTCCGGAAACCCTAACAGC 636384 37 100.0 34 ..................................... TTCAACTTTCATCTGAGGGATGACAAACATCTGG 636455 37 100.0 35 ..................................... CTAATAGAACAGGGATTAGCCCGAGAGGATTTCCC 636527 37 100.0 34 ..................................... ATTGCGCTGCAAGCCACCTCCCATAGCCTCGCCC 636598 37 100.0 34 ..................................... TGCTAGAATCATCAAGAAAGGTGACAACGAATAT 636669 37 100.0 34 ..................................... TAGATTTAGATGCCCACCATTTAGGATTAAATAG 636740 37 100.0 33 ..................................... CTCCCCCGCAAGCCTCCGCTCCTCTTTCCTCCC 636810 37 100.0 34 ..................................... CTAATAGCCGCGCTTCACACTTGGCTATGTGGAA 636881 37 100.0 36 ..................................... CATAGTTCAATCTCTAATAGGGATTTGTGTTTTTCG 636954 37 100.0 32 ..................................... ATCTGTATCGACATCTGCATTTGCTGTTATGG 637023 37 100.0 34 ..................................... ATTGTGCTTCCTTGGTCTTCCAAGGGAATGGGAA 637094 37 100.0 41 ..................................... CCTTGATCGCTTGCTAATATTCGTTTTTTACCATCGTTGAA 637172 37 100.0 39 ..................................... CAACAAGAATTTCGAGTCTGAAAAAAGACTGCGTGCATT 637248 37 100.0 37 ..................................... AGCGCTGGATGCATCCCCACTACCGCCACCCCCACCA 637322 37 100.0 35 ..................................... TATCACAAAACATAGCAGCCTCATCCATTTTACTG 637394 37 100.0 34 ..................................... ACGCTTTACAAAGAAAGAAAGAGAAGAGATAAAA 637465 37 100.0 33 ..................................... AAGAATAACCTAATTTAATTAATCGTCCATTAT 637535 37 100.0 34 ..................................... TTCAAACCCCATCTTAATCACCACTCGCTCTGCT 637606 37 100.0 47 ..................................... CTGGTGTTCGCCGCGCCAGATTAAATAGCATGAGGGCATCGCTGAGG 637690 37 100.0 34 ..................................... GGTTCAGGCGATAGATAGGCTAAACTAAGTTACA 637761 37 100.0 35 ..................................... ACGCCAGGAGTTAATTACAACTCATTCCAGATAGA 637833 37 100.0 37 ..................................... CTCGATAAGCTTTGCTAATACTGTAGCTGGTGCGTAG 637907 37 100.0 35 ..................................... CCAGTTCTCTAATGCGATCGCTTTGAGCAGGAATA 637979 37 100.0 34 ..................................... CTGATACCGCTTCGCTTCGCTGAACAATCCGATA 638050 37 100.0 36 ..................................... ATGTAATCCCCACTTCGTGCCGTGGAGCGCGGTGAG 638123 37 100.0 37 ..................................... CCTTTAAGTTGTTCACTGGCGTTAATAGGATATTCAA 638197 37 100.0 34 ..................................... GTTTGTATCCAGCCCAAGGGTCAAACTTATTGCC 638268 36 97.3 35 .........-........................... CATCAACGTAAACCATGCCTCGTCCGCAATACGAA 638339 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== =============================================== ================== 42 37 99.9 36 GTCTCCACTAACAATGTGGAGGCGAATTAATGGAAAC # Left flank : TTGAGGATTTTTACCCACCTTGAAAGGGCTAGGTTGTTTCATTTTAAAGAAAAGAAGTCAACTACCGACTATTTCAAAAGGGCGATCGCATTTCCAAAAAACCTAGTTTCAATATCTTCTGGAGACTAAGGTTGATTCTCACTTTTCAAAAGGGCGATCGCATTTCCAAAAAACCTAGTACTGTATCATTCAGCAAACAGAATAAAATATGTATCAGATCAAAAGTGAATTCCACCAGACACTACATTTTTGCGCGAACCCCTAGCTGTTTTTATCGAACGCTTGTTATATAAGTTTCAAAAGCTTATCTGTACTAGCTTTGAGCGATTTTCTCTCAAAACGAGGTTCGCGAAAACGCTGAAATCCTTACCACAAATGATTTCTGGGCAATTTTACACATCAAGGCATTTGACAGGCGATGGCTGAAACGGTACTTTTGGATCTGGTTCGCGAAATTAGGTACTGTAAGTCTTTTATTTCAAGGCTTTCAAACCCCAGCA # Right flank : CAGAAATTCGCTGGTATCATCTCTTGATACTACAGAGTCTCCACTAATACCGATTTGAAAAAAGAATGCGACAAATAGATATTGTAGAGACGCTTCAAACAGCGCGTCTGGTCATCAGAATCTGTTGCAAACATTTATTGATATCAAATCCGTTTGATTAGTTATCGTATCTGCCCTCACCCCCTTCCCCTCTCCCAACTTGGGAGAGGGGTGTCCGACAAAGGTGAGGGTTTTTAATGAACATGAATTAGCCGGACTTGATATGAATCGGTATAAAAATGTAGAGGCGAATTAATGAAATCCTAGCAGTACCGCCCCAACCAGTACCTCACAATCAACGATTAAGTACAAATTGTTACTATTCCACAGTAACACTCTTAGCAAGATTACGAGGTTGATCCACATCCAAGCCGCGACGGGCAGCAATGTGATAAGCCAGTAATTGCAAAGGAATCACACTTAGGATGGGGGAAAGTAATTCATCCACAAAAGAAAGGGGA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCCACTAACAATGTGGAGGCGAATTAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.76%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.80,-2.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA // Array 3 858149-860512 **** Predicted by CRISPRDetect 2.4 *** >NZ_KI912151.1 Fischerella sp. PCC 9605 FIS9605DRAFT_scaffold4.4, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================================== ================== 858149 37 100.0 34 ..................................... TTTAAATTTGTTCGATCAACCCACGCATTGTCCT 858220 37 100.0 32 ..................................... TGAGGAAGATCTAAAGACTGCTAAAGAATATA 858289 37 100.0 36 ..................................... TGGAAGGCATACCTTCAGAAAAGGTAAGTAATAGAG 858362 37 100.0 37 ..................................... CCGCTATCGCTGCATTAAGGGCACCACCTCCAGTAGC 858436 37 100.0 34 ..................................... AGCATGTAGGGCGTAAAGCCAATCTGCTTCACTG 858507 37 100.0 35 ..................................... GAGATACAAGGGATGACTGGTTTATCCCTAGGGGC 858579 37 100.0 46 ..................................... AGCTTACCCGACTTGTAGTCATCCACGATAGCCTTGAGGCTACCTT 858662 37 100.0 36 ..................................... GCTTCATAAGAATCTGAGTGACTTTTTCTAAGTATA 858735 37 100.0 35 ..................................... CTTAGAGGGTGAACTAGGAATACCGGAGGCTGACT 858807 37 100.0 35 ..................................... AAGTATATGGCGGCTCTAGGGGTAGACTTATGTAT 858879 37 100.0 34 ..................................... CTGAGCGATTCAGAGTATGTGTCAACGGTCGCCG 858950 37 100.0 33 ..................................... TTCCAACGCTTACACCAATGCAAATCTTGATTA 859020 37 100.0 36 ..................................... AATAGGAACGTGGGAGCATGGGAGCGTGGTTAGGGC 859093 37 100.0 33 ..................................... ACTAGACGAATCACTAGCCCAGTATCGCTTCTC 859163 37 100.0 31 ..................................... ACATTTGGGGCAATGTGGCTCACTCGCCGAA 859231 37 100.0 41 ..................................... ATCCACAGATAGTGTTACAGTGCCTGTAGTGCCCGCCCAGG 859309 37 100.0 38 ..................................... CATCCAAGCCAGCAGCATAATTGAAATTATCGACAAGA 859384 37 100.0 35 ..................................... GCGTGAATGGGCAATAGGAAATCATTAAATACTTT 859456 37 100.0 35 ..................................... AACCCCTGGGATGGGCGGAATAGCCCAGTCCAAGA 859528 37 100.0 37 ..................................... AAGAGTTTCTTCTTGAAGCCATTAAGCGTGTAATCGG 859602 37 100.0 35 ..................................... TTATCATTCAGGCTACCTATAGGTAGCCCATATAC 859674 37 100.0 37 ..................................... ACACAAGAGACTGTACCCCGAATACCTTAATCATCGC 859748 37 100.0 34 ..................................... CTAAATCCACTTTGAGACGATATTTTATAATCTT 859819 37 100.0 38 ..................................... TGTTCAAGGATGTTGAAGAATTGACCAAATCCGGCATC 859894 37 100.0 33 ..................................... CAGAGTTAACTCTGAACTCTGAATTCCGAATTC 859964 37 100.0 35 ..................................... AGAAAATCAAAAACAACCAATAATAAATGTAAATC 860036 37 100.0 36 ..................................... AGTAGTACACTTAGGTTTCTATCTAGTGCTTCTCTG 860109 37 100.0 36 ..................................... TTACTACATCTAATTTACGTTCTAAATTATTAAATA 860182 37 100.0 39 ..................................... AAAACGTGGTTAGAAAGTAAAGAGAAAGCAGAAGTTGTT 860258 37 100.0 33 ..................................... AGTACCTACTGGGCGAAAGTAGAAAACCTCCTC 860328 37 100.0 40 ..................................... TTGAGAACACAACATCCTGGGAATTCTTGATTTGTTCTAT 860405 37 100.0 34 ..................................... ATTTAGTGTTGAAATAAAGCTTGATTCTGACCAA 860476 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ============================================== ================== 33 37 100.0 36 GTTGAAACTTTTACTAATCCCTATTAGGGATTGAAAC # Left flank : CTCAGTCAGATTTTGGAAATCTCCCGGCAAATTGATGCCTTAGTTCAGTCGATATCTACTGCTACCGTGTATGGAGTCCAAACATCGCAAACTGTCAGCGAATTAATGAAACAAATCGCCGCCACCTCTAAGCACACCAGCGATTCATCAGTGCAAGTTTCCAAATCTTTGCAACAAACCGTGAAAATTTCCCAGCAGTTAAAGGAAACTGTCGAGATATTTAAGGTGAATTAGGGTAAACAGCCTTTTGACAGCCCCATTTTCTTTGTCTAATGCGCGGATGGGTAGGTGTTGGAAAAGAAGTCTCAGAAAAAATGGCTGAATTGTTTTTGGTACAAGATTTGAGGGCGATCGCACCACCTCAACCATCCGCGCTCCTTACCCAGACTGAGTTTCAGCCATTTTCACCCTAGACAATCCCAATTTCTCATGCTATGATTCACCCATCCGCGCTAACGAACCTTGAAAATCGAATACAGACTTGCTTTCAGGTTGCTGCT # Right flank : CTTTCCTGGTAGCCAAATCCTTGACCAGACGTAGCATTGCTACGTCTCTACATACCCGTGAATTGTAAATTCATCCGCATGATTCAGCAACGCCCAAAATAATATTAACTCCGTTGCCAAATTTTAATCGTCTTATCCAAACTTCCACTCACCAAAATTTCCCCAGAAGCAGTAAATGCTACTGCCGTAACAGTGTGAGTATGACCTGTAAATGTAGCCAGCAATTCACCTGTTTGTAGATGCCATAATTTAATAGTTTTATCTGCGCTGCCACTAGCGACAGTTTGCCCATCGGGAGAAAGGGCGATCGCATATACTCCATCTCTGTGTCCTTTCAGGGTATGCAGCAATTCCCCTGTTTCTAATTGCCAAATTTTGATAGTCTTATCCCGACTGCCACTGACAAGAATTTTGCCATCAACACTCATCGCTAGCGATCGCACAATATGAGCATGGCCTGTGAGAGTATGCAATAACTCAGCATGTGGAGGTTTACCTCC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAAACTTTTACTAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.20,-7.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [51.7-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.37 Confidence: HIGH] # Array family : NA // Array 1 4923-5272 **** Predicted by CRISPRDetect 2.4 *** >NZ_KI912152.1 Fischerella sp. PCC 9605 FIS9605DRAFT_scaffold5.5, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================================== ================== 4923 36 100.0 46 .................................... GCCGTTGTTTCCTTTCCTGGTGAAACGCGTAGGTCAGGATTGTGTG 5005 36 97.2 35 ...................................G TCTTCGTTTCCCTCGTTATTTACGAGTGCTTCAAA 5076 36 100.0 46 .................................... CCGATGAGTACTCTCCTTTGTGTTCAAACCCTAAACTTCAGGTGAA 5158 36 100.0 43 .................................... CAGTTGGTACGTGTTGAGCGATAATGCGACCGCTTCAAGATAA 5237 36 97.2 0 ................................A... | ========== ====== ====== ====== ==================================== ============================================== ================== 5 36 98.9 43 GTCGTAGACTACCCTTTCCCCTCACGGGGACGGAAA # Left flank : ATTGCCAGGGCTAGACTGAGGGTGTTCATTTGGGCACAAACGGGCTACTGTACTGAACTGAGGGCGTTGCTTGCGGCTATTCCACCTCATGCAACAGGCGATCACAACAATCACTCATCAGTTATCAACAAGAAAATAATGAGGCTACCTCATTATTTAATTTTGTAAAGGGCACAGTTGAAGCATGGACTGATATATAAACGCTGAAACTAGCCCTGTATAAGCTTACGCTAGATTGTAACGAAATATAAAAAGGAGTTTAAAAATGACGCAGCAAGCTATATCAACTTAAGCTAAGCAATATTTAGCTAACCGGAGATAATCAGATTTTTTTGACTTGACTTGTTCGTGTTTTCTGGTTAAATTCATTATAGAAACAATATTTGGCGCAAAATGTTTTTGAAGAACAGTACGGAGCAATTAAATTACATTATAACTTCCGTAGCATGGCGCAACTGCACCTTGAAAACCAAATATAGTAAGAGTTTCTACAGGGTAGG # Right flank : ACTTGAGTAAAGCACAACAACCGAATTGGTGACATGCGTTGATAGCATGATGTCTAAGAAAAAGAGAAAATCTCGCAAAAGCTTATTCCCCTGGGAAATAGAGGATACTCTCAAGGCAGCGATCGCGCTCCGAACAAGAAATGGTGGGAGCTTTTGTAGAGGAATGGACTCTTATATTGGGGCTTAGTCCCAAGGCAGCGATCACGCTCCGAAAAAGGGGTCGAAAAAGGGGTCGTTAAGAAGCCTTCACCCCTTGCAGTGGATGTGCACGCTTGTGGTGCGGCGGTTTCTGATGAAGGAGTAAGGAGGGCTTACGCTCACACCTAACGCAGTGAAGCGCAAACGTTCTGCTTCTTCCCCCTGCTCCCTGCTCCCTGCACCCTTGCCTCTTCAACTGTCCTGCATCAGAAAATCCACAGTCCGCATCAGTGCGCCATCGCTTTTGGGATGACTGCACACGCTAAACCGAAGCTAAACAAATCGCCATCAACAATTACCGG # Questionable array : NO Score: 3.01 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTAGACTACCCTTTCCCCTCACGGGGACGGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.30,-9.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA //