Array 1 178932-175061 **** Predicted by CRISPRDetect 2.4 *** >NZ_SHKX01000014.1 Fluviicoccus keumensis strain DSM 105135 Ga0310546_105, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== =================================== ================== 178931 31 100.0 32 ............................... TCCTTGGAATGTTTTAAGACGTATCTGAAGTC 178868 31 100.0 35 ............................... ACGTCACGGTCTTCGTGCTCATCCCAGACCTTGTA 178802 31 100.0 33 ............................... CGCATCGCCTACGTTCCGCAAAGCCTGGACGAG 178738 31 100.0 34 ............................... TGCAAGTGGGCATGGTTCGCGCTGGAATGCGGCC 178673 31 100.0 32 ............................... TGACCCGGCTGACGTGCGAGCTGGCCCGCTTC 178610 31 100.0 33 ............................... ATTACCTGCTGAAGAGGTCGGTGGAAGTACAGG 178546 31 100.0 33 ............................... ATAGGTGGTGCGCGGATTGGCCTCGACAAGCAG 178482 31 100.0 33 ............................... TACGCCGAATCCCACGATCTGGAAACCGGCCGC 178418 31 100.0 33 ............................... GCAGCATGTTGAACTGTTGGAAATCCTGCTGTC 178354 31 100.0 33 ............................... ACGGCGTACATGGTGGCCAGAACGATAGCTGCG 178290 31 100.0 34 ............................... ATCATGAACATGATGACTTCATCCAGCGCCAGAG 178225 31 100.0 33 ............................... CTGTCAAACCCGAAGACAGGCGGCCCGATGATG 178161 31 100.0 33 ............................... TTCTGGGTCGGGTAGACGAACATCATGCGCTCG 178097 31 100.0 33 ............................... ATCCGCACCCAGCCGGATACCCCTTACAGTTAC 178033 31 100.0 33 ............................... ACAAGTACGTCAGCGACGAACTGTTGGCCGATG 177969 31 100.0 33 ............................... ACCAGCGAAACGGATCAGCGGATCAAGATCGGT 177905 31 100.0 34 ............................... AGGTCGGTAAAGGTGGTGGTGGTGCCAGCAGCCT 177840 31 100.0 32 ............................... ACACCCTTAACAGTCATGGTCGTCTTCCGGGT 177777 31 100.0 33 ............................... TGCTGCCGACCTGCAACAAATGCTGATCGGTCA 177713 31 100.0 33 ............................... AACCAGACCGTGCTGCTGTGGATCGACGACCAG 177649 31 100.0 34 ............................... GCCGCTATCTACGTTTCCAACAACGTCGACATGG 177584 31 100.0 33 ............................... GTCCGGCGTGCATGACGTTGAATTGCAGTTCGG 177520 31 100.0 33 ............................... CTCTCCAACGAGATCCAGCCGCTGCCGGTAGAG 177456 31 100.0 33 ............................... AATCACCTGCAGGACATCGGTGAAGCTCATCGG 177392 31 100.0 35 ............................... CGGCGCGCGGGGTGAAGAACTCCCATGCTGCGCCG 177326 31 100.0 33 ............................... AAACTCCAGCACAAATGCAGTCAAGTCCTGCGT 177262 31 100.0 33 ............................... AGGACAGACCGGCAGTTGCGCAGAGGCACAGCC 177198 31 100.0 33 ............................... TCTCTCGCCTTCGTCGAACAGCAACTTATCCGC 177134 31 100.0 32 ............................... TCGATGAAGGGGCTTAAACCCGCCACCGGAGC 177071 31 100.0 32 ............................... CAGTCGCTGTACTGACCCTCAAGCTGCAGCTG 177008 31 100.0 32 ............................... ATCGATGGGGCCCGGCGGCGGAAAGTCGCCAT 176945 31 100.0 34 ............................... TTCACGGTCACGGTCTGGGTGGTGTCGATCGGGT 176880 31 100.0 33 ............................... CCACCGGCAGCCGGATCATGTCATTGGTGCCGG 176816 31 100.0 32 ............................... AGGGTGACAAGCCATTGCCCCCGGTTGCTGAT 176753 31 100.0 32 ............................... CCACACCGCACAGGTGAAGAAAAATGACCGAT 176690 31 100.0 32 ............................... CGGCAGTCGCGGAACGTTTCCAACAACAAGCG 176627 31 100.0 32 ............................... CTGAACCGCTTTCTTGCCGCTCCACACGATGT 176564 31 100.0 33 ............................... TGGCTTCATGTTATTTGGCCTGTATGCAGTAGA 176500 31 100.0 34 ............................... TACAAGTTCAATCTGCGGCCATACCTGGAAAAGC 176435 31 100.0 33 ............................... ACCGGATACTTCAGATTCCCCGCCCGCAGCTTG 176371 31 100.0 32 ............................... CTCGGCGGTTGGGAACTGGAAATCGCCCAGGC 176308 31 100.0 33 ............................... AGCCGTCCTGCCGTGCGTCACCTGATGTCAACC 176244 31 100.0 35 ............................... GGAAGACGGAGTTGGCGAGCCTGACGCCGCCTACA 176178 31 100.0 33 ............................... GTAAAAGTCAGGTTTGCCGGGTTGTAATAGCAT 176114 31 100.0 33 ............................... ATGGTCTACACCGAATCCGCCGAATCGGAAAAC 176050 31 100.0 32 ............................... CTGTCTTTGCACTGATTTTCTTGTAGCTATAC 175987 31 100.0 35 ............................... TGCTTGATCGCCTGAACGCCAGCATTGAAAAGCGC 175921 31 100.0 33 ............................... ATGATGAACGGTTCCGGCACCGTCGCCACACAA 175857 31 100.0 33 ............................... TTGGCGTATCTCCGAATGCCATAGCACACCTGA 175793 31 100.0 33 ............................... CTTCGCCGTCTTGATCCGCCGCGCCCACCATTC 175729 31 100.0 33 ............................... TGGAATGGAGTTCCGGCATATTTCCTCGATAAA 175665 31 100.0 32 ............................... AGTCATATAGGCGGAACCACAAGATCGGAAAG 175602 31 100.0 34 ............................... ACAGCATCTTGAGCCAGGAACACGCGCCCATCGG 175537 31 100.0 33 ............................... ATGATGTTTTCCTCTCTCAGGATTTGCGCTGAA 175473 31 100.0 32 ............................... CAGCCCTCGCCCTTGTTGCGGTGATAGGTTGA 175410 31 100.0 32 ............................... TCGTCGTTGATGTGTTCAAGGCGCTGCATGAG 175347 31 100.0 32 ............................... CACGCATCGGCGCGTACCAAGCCCCCGCGAAA 175284 31 100.0 33 ............................... ATGTCGGCTATGGCGTCGGCCAGAATGACGGGG 175220 31 100.0 34 ............................... ACCTCTAACCCGAACATGGACCACCCGGAGCTGA 175155 31 100.0 33 ............................... TGGCGGCATCGCATGACGGAAAGCGGTTGCTGC 175091 31 93.5 0 ...........G....T.............. | ========== ====== ====== ====== =============================== =================================== ================== 61 31 99.9 33 GTCGCGCCTTCACGGGCGCGTGGATTGAAAC # Left flank : TAGCATGGAGGCTTCAGCATGATGGTTCTGGTGACTTATGATGTAAGCCTGCAGGATGAGGCGGGTGCCAGGCGCTTGCGACGTATTGCCAAGATATGTCGGGATTATGGACAGCGAGTGCAGTTTTCAGTTTTTGAGATTGAGGTTGACCCTGCCCAGTGGGTCATGATTCGGAATAAGTTGGTGGGTGAGATGCGGTTGGAAACGGACAGTTTACGTTTCTACTTCATGGGCAGTAACTGGGAGCGTCGGGTTGAGCATGTGGGGGCAAAACCGGCGTTGGATCTTAAAGGGCCGCTTATCTTTTAGCGCGCTTGTCACTTTGCGAACCTGTAGCGGACAGTGAAATCCTGTCATGTTCGCAGTCAGTATTTTTCCGTTAATGATTAGTCATGTGTCTAGAAAGCATCCGCATTAACCTGGCGAAAGGTCTTTTGCCGGTAATGGTTCTTCAAAACCTTGCAAATGATCTAGGGAAAACAGTGTGTTATAAGTAGGTG # Right flank : ACCACGCTGGCGGGCGGGCTGTTCAATTGGGCGGTCGCGCCTTCACAGGCAAACTTTTAATTTAAACTCCGGAATACTTATGTCCCTTTTCATCGCCGGTAAACCCCTACCCAATCCCGCCCCCACCCTCGACCTCCCCCGTCCCGACCGCTTGGTCGACGGCAACCCAGCCCGCCAGACCTGGGACTGCTATAACCACGGCCCCATGAGCGCCGGGTTCTGGGAATGCGAGCCTGGCGCCTGGCGTATCGCCTTCGCCCCGGACAAGCAGGAATTCTTCCAGATCATCCATGGCCGCGTCCGCCTGCACGCCGATCATGGCCCCAGCCACACCATCGGCCCCGGCGAAGCCGCGATCATTCCGCCGGGATTTACCGGCGTATTTGAAGTGCTGGAAGCCGTGCGCAAGTATTACGTGATCGTGGAAGGCTGACGAAGCCGGGGGACAACCCGCTATAATCACCGGCTGCATTCACCCGGATACTTTCATGAAACGCAAC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCTTCACGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCGCCCTCACGGGCGCGTGGATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.40,-6.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [40.0-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,10.05 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //