Array 1 51089-46117 **** Predicted by CRISPRDetect 2.4 *** >NZ_FRBU01000020.1 Flavobacterium xanthum strain DSM 3661, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================== =============================== ================== 51088 46 100.0 30 .............................................. AGTAGCCAGAAGTTCAAATGTAGATATTGA 51012 46 100.0 30 .............................................. TATGAGGCATTGCTAGAACTTGGCTTTGAA 50936 46 100.0 30 .............................................. GGCAACGATCAACTTCTACAAGTTGCCCGG 50860 46 100.0 30 .............................................. GCTTTACACAAGTGGATTAACGACATGAAT 50784 46 100.0 30 .............................................. GATACAACTATTGCCATGTGGACGTTCTTT 50708 46 100.0 30 .............................................. TTAAATTTGATTTAACCGCTTGCGAACTTG 50632 46 100.0 30 .............................................. AAACGGCGCAAGAAAAAAGAAATTCAGAAG 50556 46 100.0 30 .............................................. GCTGAAGCTGTGTAAATGAAGCCCGACTCA 50480 46 100.0 30 .............................................. CCCACCAGCGCGGTCAGGCGCTTGAGTTCG 50404 46 100.0 30 .............................................. TTTTGAGTAATTTTTGTTCCGCATAAACTA 50328 46 100.0 30 .............................................. TGTTGCAAGATTTTAAAGAAAAAGGATATG 50252 46 100.0 30 .............................................. TTAACATAGCAACAGGCTTAGGCGCGCGTT 50176 46 100.0 30 .............................................. ATAGAATTATAGCGGAAAACACTAACCTCA 50100 46 100.0 30 .............................................. GAAAGAAATATATGTTTCTTACTGCATTTG 50024 46 100.0 30 .............................................. CTCCGTTAACCGCCTCAGGCTGCGCAACTA 49948 46 100.0 29 .............................................. GGCTTCTACGTCTTGCTTGCAATATTCTT 49873 46 100.0 29 .............................................. AAGTACTATTTTCGTTCGGGAAATCTACG 49798 46 100.0 30 .............................................. AGGTAGAACGGAATACATGAGTAACCCGCA 49722 46 100.0 30 .............................................. CGTCAAGTGTCAAGGCTGTCATAAGCTTCA 49646 46 100.0 29 .............................................. AAGTCATACGCTTCGAGAGCTCCTGCGCC 49571 46 100.0 30 .............................................. GCGGTTTACCGTTAAGTCTTGACGGCGCTA 49495 46 100.0 30 .............................................. CGACAAGATAAAAGAAGGCTACAAAACTAA 49419 46 100.0 30 .............................................. CGCAGGCCAAAGAGGCGCAAGACAAGAGTA 49343 46 100.0 30 .............................................. CGACAAGATAAAAGAAGGCTACAAAACTAA 49267 46 100.0 30 .............................................. AAGAAACTTATTATGTTACAGAAATGTTTT 49191 46 100.0 29 .............................................. AAGATGTTGTAAAGGCCATTGCTGAAATA 49116 46 100.0 30 .............................................. TATTGGAAAACATTGCCAAAGGCACTAGAG 49040 46 100.0 29 .............................................. CCCGCCATAGTTCAAATGTGGGGCGATAT 48965 46 100.0 29 .............................................. CTTTTACCCGTACAACTTTGAAAATATGA 48890 46 100.0 30 .............................................. TTTGCAAAGGCACGGAAGACGAGCGCGTGA 48814 46 100.0 30 .............................................. ACTATATTTTTTATGGTAGTACCTACACTT 48738 46 100.0 30 .............................................. TTTTAAAGGAAGAAGAAGATGATCTTAAAA 48662 46 100.0 29 .............................................. GTTCCGATCAACTAATACTTCGCCTTTAA 48587 46 100.0 31 .............................................. TTAACGATGTATTATTAGGATCAGTAAATTA 48510 46 100.0 30 .............................................. GATAAAAGTATGTGCCGTCTGGATAGCTGC 48434 46 100.0 29 .............................................. AGCGCAAGGGAATGATAGAGGAGTTCTTG 48359 46 100.0 30 .............................................. TTATCGAAATGGCTGAGCTGGCAGGCTTGC 48283 46 100.0 29 .............................................. AGATGAGCGCGTGATAAGAGCCCTTGACA 48208 46 100.0 29 .............................................. TGGATAGCAGAAATAAATCTAGCTCCTTT 48133 46 100.0 29 .............................................. AGATGAGCGCGTGATAAGAGCCCTTGACA 48058 46 100.0 29 .............................................. TGGATAGCAGAAATAAATCTAGCTCCTTT 47983 46 100.0 29 .............................................. AGATGAGCGCGTGATAAGAGCCCTTGACA 47908 46 100.0 30 .............................................. TTAGGTAAGATTGCGTCTTCGTGTTTTTTT 47832 46 100.0 29 .............................................. GATAGCAGGTGGTAAAGTTGTGAGCGTTG 47757 46 100.0 30 .............................................. ATGATAGACTTACAAAAAATAATAGACGCT 47681 46 100.0 30 .............................................. GAGTATCTAAATACACTGGAGTGCGTCAGG 47605 46 100.0 30 .............................................. TCAAACTCCTGATTTATCATTTGATAATGT 47529 46 100.0 30 .............................................. TTGTCCTGCATAGCAAATTCTTGCATTTCT 47453 46 100.0 30 .............................................. TTTACGCTTTGCGATCCACGCTAACCGCCA 47377 46 100.0 30 .............................................. CTGATTTAGATTGACTATTTGATGACGTAT 47301 46 100.0 30 .............................................. TGAAGTCAACTTTTTCAATATACTCCTCAG 47225 46 100.0 30 .............................................. TGTTATTATATTCGAATATTGCTTTGGCGG 47149 46 100.0 30 .............................................. CAACAAATGGGGTAAGACTTCGATACGATA 47073 46 100.0 29 .............................................. AAAATAATGGGAGACACCGATCCGATTTA 46998 46 100.0 30 .............................................. TCAAAGTTTACTATCCCGTCCAGTATAACG 46922 46 100.0 30 .............................................. TCAACAAATGGGGCAAGACTTCGATACGAT 46846 46 100.0 30 .............................................. TTCTTCTTCCCGACTCTGGGTCAGGCCTTA 46770 46 100.0 30 .............................................. GCGGATGAATCAGACGTTAATTTTGCGACA 46694 46 100.0 30 .............................................. CTAATCTATTCATCGATAGGGGTTTACGCT 46618 46 100.0 30 .............................................. CAAGAAGGGATTACAGCTACTGAGCTATTT 46542 46 100.0 30 .............................................. AGTACGCCGATGCGCAAAAAGCGAGAGCTG 46466 46 100.0 30 .............................................. TTGCGGGGCTACCGGATAGGTTAGTACTTT 46390 46 100.0 30 .............................................. CAATTTTATTGACAGCTCAAACTCCGTTTG 46314 46 100.0 30 .............................................. CGTTCAATCAGTCTATTAAATTCGTTAGTT 46238 46 100.0 30 .............................................. AGCGTCTTAAAGTAGCCCGCCCATTTCTTA 46162 46 100.0 0 .............................................. | ========== ====== ====== ====== ============================================== =============================== ================== 66 46 100.0 30 GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTCCCAAC # Left flank : TCAGCAATGGCGTCCAGAGCCATCTGGTTTTTAGTGTCCATAGCAGTATCAGTGGGGGAGGCCTCAGCAGGAACAACTACGTTATCTTCGGCTGGCATATCACTTGGTTCTGTTTCAGGTGTTGCTTCAAGGTGTTCCTTTTGGAATTGATCGGATGCCGTAGCATTGTTTTCTAAGTTTCCATCTGCTTCGTTTTCCTGACGAGACAGGTTATCATTCTTTTCTTCTAACATTTTTTCAATGTATAAGGTTTGTATTTATATCTATTGCGAAAGATACTAAAGCAGTATCAAAGTACAAAATAAAACCATTATTAATAGTCGTTTTATATTTAAAAATGTTTTCATTTGGAGCCATTTCCTGCTGTTCGCTGTATCTTTTTGTTAGCAAAAAAGCAAACTAAAAAGGATGCCGCTGCCATCAGGGCTAGGGTTTAACGGTGTGATGAAGGTTTTGTTTAAAATTATCAAAACAAATTATGTATCGTGAGACGGGATCTA # Right flank : ATACCGCGATTCAAGTGTTTGATATGTTGAGAGTTATGAGTTTATTTTGAAATCGAAAAGGAGTGCTGCTTCTTTCTTGCAGTACAGGGAGTTAGTCATTTTTCTAATCCTGATGCTTTAAAACAACTCTAATTGTTGGGATGGTTTGTCAGTTTCGACTTGTTTTTTACCATAAAAAAGTTCCATCATCCCAAATTGTTTATCAGTTATTTGCATGACACCAATTTTTCCGTGTTCGGGGAGATTCTTTTTTATTCTTTTGGTATGGACTTCAGCATTTTCTCTACTGGCACAAAAACGCATATAGATTGAAAATTGAAACATAGAGAAGCCATCGTCTAATAATTTCTTGCGAAATGAACTAGCAATTTTACGCTCTTTGCGTGTTTCAGTTGGCAAATCAAAAAATACTAATATCCACAAACTTCTATATTGATTTAAACGGGTGTAATGTTCGTCATACATAAATAGGGTATAAAATTTTCCTTGCGGTTCCTTCA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTCCCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:71.74%AT] # Reference repeat match prediction: R [matched GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTCCCAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-1.40,-2.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [68.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //