Array 1 2282807-2281100 **** Predicted by CRISPRDetect 2.4 *** >NC_019703.1 Geitlerinema sp. PCC 7407, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================== ================== 2282806 36 100.0 42 .................................... ACGGATAGCCATCAGTGCAGGTAGAGGGAAGAACCCTGGTAG 2282728 36 100.0 36 .................................... AACAGACTTGCCTAAAATTAGGCCTAAAATCAGCAC 2282656 36 100.0 35 .................................... ACCAGTACGACGATGACAACGACATCGGCTATGCG 2282585 36 100.0 40 .................................... AGGAGCAGACCGCTTTGCGAGCGGGAACACAGCAACCGTT 2282509 36 100.0 35 .................................... ACCTGGAGACGGCGCAGGGAGCCGATTTCGACCAC 2282438 36 97.2 36 .......T............................ ACACTTGATATAGATTGGGGTCTATCGGACTTGGGC 2282366 36 100.0 36 .................................... AGATGAGTGGGTGGTGCCGTGAAGCTGAGCGCTGAG 2282294 36 100.0 35 .................................... ATTCGAGGACGACGGCTCAGGCCGCCCGACGGCTT 2282223 36 100.0 35 .................................... AGAGCGTGCACGACTTTTGGACGGCAACTGGAAGG 2282152 36 100.0 36 .................................... AAATCAAATCGATCGCCCGCTGACGCGATTGATTGC 2282080 36 100.0 40 .................................... AGGGGCACCAACCTTGGTGCGTCGAGCCGAGCAGCCAGCA 2282004 36 100.0 34 .................................... CACGGTCCTCAACTCCTTCCTCCCCTCTTATGAG 2281934 36 100.0 36 .................................... CTTCTAGCCATTTGCTCCAGATCCCATATTCAAGCT 2281862 36 97.2 37 ...........A........................ CATCCCAAATCGGGAGATCCCCGAAGAGCGGATCATT 2281789 36 97.2 36 ...........A........................ CAGCGGCCAAACTGGCTAATGGCACCCTAAAATGCT 2281717 36 97.2 37 ...........A........................ CCATGGCACCTTCGCCGTCTTCATTAGCAGCTCCGAT 2281644 36 94.4 36 ........T....T...................... CGTGGCACCCGAAGCCGCAGCTGCGGAGCCCCAACC 2281572 36 94.4 36 ...........A......A................. CATCAACACGGTGGACTATGCCACCTACACCCTAGG 2281500 36 94.4 35 ...........A......A................. CAAGGATCAGATCAAGGGCATCTTTCAAAGCTACC 2281429 36 94.4 37 ...........A......A................. CCGAGAGAGTGCTTTCGGACAGCAAAAAATGCTTGGA 2281356 36 94.4 38 ...........A......A................. CTGCCCCTCGGCAACGATCACCTCGCCCACTTTTGCGT 2281282 36 94.4 35 C..........C........................ CGAGCAACTCAAAAACTTTGACTGGAACGCCAGCG 2281211 36 100.0 39 .................................... CGCTACTGGCGGCGATACCTCCCAGACCGTAACGTTCAA 2281136 36 91.7 0 ...........A......A...............C. | A [2281104] ========== ====== ====== ====== ==================================== ========================================== ================== 24 36 97.8 37 GTCTCACCGCATTCTCAAGATGCGGCCCCTTTGAAG # Left flank : AAATGCCCAAGGGAAGGAGCTGGTCAAGGTACGCTGTCTCTCTGATGATGAGAAGAAGGCTTGCAGCGACGATCCTTCCAAGCATTTGCATTGGAAGCAGTTTCGGCGGCGGCGCTACTCGGGTGAGGGGAGTCGATCGTCGGAGTGCGGATACTGGCTAGAGCTGGAGTTTGCGGAGCCTCGCCAGGGGCCGATCGCTCTGGGCTATGGGGCTCACTTTGGGCTGGGGGTCTTTTTGCCGGTCGATGGGGGCGCGGATCGGGGGATGTAGGAGGAAGAGGAGTGAGGCTGGTGGCCCAAAGCCTGACGGGAAGGGCGATCGCGCTCTGTGGCGATCCAAAAGGTCCGCGCCCTTTCTCAAAGGTTTGTTGCCTGGAAGTTTTTTGGGGTCTTTCGGGCTCTATGCTAGGCCCACCAGTCTGCTCGATCGCTCTTTTTGAGACCGATTCGCGCATCAGAACCTTGAAAACTAAATCCTCTCTGCTTTTCAGCCGCTCGCT # Right flank : CCAGCCTATAGACTGACCTGATCCTGGAGATGTCGGATTGTCCATAGATCAAAAGCGCCTGCATAGAGGAGATCCCAGATCGACTGGAGAGGCCCCTGGGTCTGGCGATAGCGAAGCAGGTGATCGATTCGCCAGTCATTCATGAGAGATAGCTTCGCTAGCTCCTCCGCAGTGGCCGTATTGAGATTGATCTTGCCAGCGTGATGGATCTCCTGGGGTGGCTCTGCTGGCGGATTTTCCGAGACCTCCTGAGGCAGCGGCACCGCCATCACCGCCGCGTAGGCATTCACGATGCCGTGGCCCAGGGGGGCGGGCTCGGAGGCAGGCAGAGACTGGGCTGTGCGCTGGAGACAGGCGATCGCCTCCGGGGCAGAAAGCTGGGGATTGCGAGCAAACATTAGCCCCAGTAGACCCGCCACATGGGGAGCCGCAAAAGACGTCCCCCAAACGTAGGCATGCTGGCCCCGAGGACTCGCGACATAGATCGCCGAACCCGCCGA # Questionable array : NO Score: 6.03 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.88, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCACCGCATTCTCAAGATGCGGCCCCTTTGAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-9.20,-9.20] Score: 0/0.37 # Array degeneracy analysis prediction: R [8-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [50.0-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.41 Confidence: LOW] # Array family : NA //