Array 1 977235-974585 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP029582.1 Klebsiella pneumoniae strain DA33140 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 977234 29 100.0 32 ............................. GAGCAGGCACCCGCCGCAACGACGAAGAGCGC 977173 29 100.0 32 ............................. AAATCAGCCAGCACCACGATTCTGGGAAATTT 977112 29 100.0 32 ............................. ACAGGCTTACCCGTATTGAGACGGTTGCTGAA 977051 29 100.0 33 ............................. GAAACCCCATCAGATGACCCTCCCCATGTTGGC 976989 29 100.0 32 ............................. TTGCCTGGTCTGCTTGGTGATGATCCGTGGTA 976928 29 100.0 32 ............................. TACAGAACGACTGAGGCGGCGTGTATTGCATA 976867 29 100.0 32 ............................. GATCTTAACTCTATTGCCAATGGCGCAATTCA 976806 29 100.0 32 ............................. GGCGATGCGCGCTCTGCTGGCTATCGGTAAAA 976745 29 100.0 32 ............................. AATGCAGCAACCGGCAAATATATCGCCGGTAA 976684 29 100.0 32 ............................. GGGCTGCCGCACGCCTGGGACGAGTCGAGCCC 976623 29 100.0 32 ............................. CCGCAATAACAAAAATAAATGAGGGTTAAAGT 976562 29 100.0 32 ............................. GTAAATGGGAATGAGTAGAAGAGCGTCATTGG 976501 29 100.0 32 ............................. CCCCCGCGCACATGCTTAAACGCGCTATCACG 976440 29 100.0 32 ............................. GGCATCTGTTGTGTAATGTTGAGTTTTTTTCA 976379 29 100.0 32 ............................. CAGGTTAAACATGTAAAAAATGACCGTCGCCG 976318 29 100.0 32 ............................. CACATTGCCCGGTCTGAAAAGTATTTGAAAAT 976257 29 100.0 32 ............................. TCCGCACAGTCAAACGCTCCAGACACCAACCC 976196 29 100.0 32 ............................. CCGGAACACCACCAGTAACAGCTACTGTAGGC 976135 29 100.0 32 ............................. TGACCCTGTTGATTTTGTTCCAGGTAATACGT 976074 29 100.0 32 ............................. TTAACCTCGTCGTTCTGGTTTCCGCCCAGGAT 976013 29 100.0 32 ............................. GAACCTGAATTCGAAGGGTGGGTCATCCTTCC 975952 29 100.0 32 ............................. GGACCCCGAGCGACCCGGTCACCCTCCGACCT 975891 29 100.0 32 ............................. CCGTCGAACGGCGGTTATATCCATCTTGAGTC 975830 29 100.0 32 ............................. ACCGATCCCACAATTGCGGCGGTTGAGATTGA 975769 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 975708 29 100.0 32 ............................. CCGATTGTCTGGCGGTCGAGCGCCATTTGCTC 975647 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 975586 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 975525 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 975464 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 975403 29 100.0 32 ............................. CCCTCCGCTTTCAGGGTGTGGCTGATATCACC 975342 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 975281 29 96.6 32 .............A............... TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 975220 29 100.0 32 ............................. ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 975159 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 975098 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 975037 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 974976 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 974915 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 974854 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 974793 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 974732 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 974671 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 974613 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 44 29 99.4 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCCTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : GTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //