Array 1 24587-23608 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JAJBOD010000001.1 Flavonifractor plautii strain MSK.9.16 JOFEBFHC_1, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                  	Spacer_Sequence                       	Insertion/Deletion
==========	======	======	======	=================================	======================================	==================
     24586	    33	 100.0	    35	.................................	AAAACTGGGGTATATGTGGCTGATACCAAAAAACG   	
     24518	    33	 100.0	    35	.................................	ACGTGGGATATGGCACAGCGTGTCAAGCCGCTGCT   	
     24450	    33	 100.0	    34	.................................	TTTGCTATATTGTCTCCCCTGGATATGCCGGTGA    	
     24383	    33	 100.0	    35	.................................	TTTTTCTATGGCTTCCAGGTCTGCCCCCGCGTACT   	
     24315	    33	 100.0	    33	.................................	CGCCACCCCTCATTGGTGCAGACATACCGTCGC     	
     24249	    33	 100.0	    35	.................................	GGAACGCAGGCCGAGCGAGTACACACCAATAAGGA   	
     24181	    33	 100.0	    35	.................................	CTCGAAGTCATGGAGCAGATCCACATGTCTGATGA   	
     24113	    33	 100.0	    34	.................................	AGCTTATCGTTTATGTTCAAGCAGTCACCCCCAT    	
     24046	    33	 100.0	    36	.................................	TCCGATTGCCCATAGATATTGTGCATACACGCTGTC  	
     23977	    33	 100.0	    34	.................................	AGGTGCTTGTAGTAGCCGGAGCGGAGGGCAAGCT    	
     23910	    33	 100.0	    34	.................................	AATCCATGCGCGACGAGCTACCTTGATTCTGGCA    	
     23843	    33	 100.0	    33	.................................	GATGTCGACAACCCCGAGCTGATGGCTGCTATC     	
     23777	    33	 100.0	    38	.................................	AGTGAGAAATACGACATCACCAAGCATCCCCGGTATAA	
     23706	    33	  93.9	    34	............A............G.......	CAGCGGCTGGACCGCGGCCACATGGAGTATGTCT    	
     23639	    32	  93.9	     0	.................-.............C.	|                                     	
==========	======	======	======	=================================	======================================	==================
        15	    33	  99.2	    35	GTCGCACCCCTCGCGGGGTGCGTGGATTGAAAT	                                      	       

# Left flank :   GGACGCCTATCCGCCCTTTTTGTGGAAGTGAGGCCATTATGCTGGTTTTGATTACCTACGATGTCAATACAGCGGATGCCGCCGGGCGCAAACGCCTGCGGCAGATCGCCAGGCAGTGCGTCAACTACGGCCAGCGGGTTCAGAACTCCGTCTTTGAGTGTAAGCTGGAGCCAGCCCAGTATAAACTCCTTCAGGCCAAGCTGTGCGCAATCATGGATCCCGAACGGGACAGCCTCCGCTTTTATTCCCTGGGAAATCGCTATGAGCAGAAGATCGAACACTTTGGCTGTAAGCAGACCTACCTTCCAGACGAACCTTTGATTTTGTAGCGTGCGAAGTCCAAGAGGACACGCCTTCTCCGGCCGGTTCGCACCCAAAAAGCATAAAGGAAAGCTTCATGGAGCATAGGCGCGTTTGTTTTCGTATGCTCAGCCTTCTTCCCCTTGTGCAAATAAGCAAATTGAGCCAAGCAAACTCTCTGCTCTTTGGTAAAGTTTGCT
# Right flank :  GTCTTACAGGGGCGCCTGGTCAGTTTGCAGGAGACGCCGCATAGGGGCGCGGGTCGATTCAAATTTTCACCCCGCGCCCCTGCTGTTTGCGTTTCTTTTCGTTGACTGGTATAGTAGGGAATGATATAATAGGATGATTATGACAAAAACTATGGTGGGAAGATCATATTATGTGGATTTCAAGTGACTGGAAGGACTATGAGCTGCTGGACTGCGGCGGCGGCGAGCGTCTGGAGCGCTGGGGCAAGTATCTGTTGGTGCGGCCCGATCCTCAGGCCATCTGGCGTCCGGAGGGGCGGCATCCCGGATGGCGGAGGCACGACGCCCGGTACCAGCGCGCCTCCACCGGAGGGGGCCAGTGGGTCAAGAAGGAACTGCCCCAGCGCTGGACATTGGGTTACAAGGGGCTGACCCTCAACATCAAGCCTATGAACTTCAAGCACACCGGCGTCTTTCCGGAGCAGGCGGCCAACTGGGATTTCGCCATGGAGCGCATCCGT

# Questionable array : NO	 Score: 9.22
# 	Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCGCACCCCTCGCGGGGTGCGTGGATTGAAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         R Score: 4.5/4.5
# 	A,T distribution in repeat prediction:     F [7,5] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTCGCACCTCTCGCGGGGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-8.90,-8.20] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [4-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [35.0-58.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.74,9.68   Confidence: HIGH] 

# Array family : I-C [Matched known repeat from this family],   
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