Array 1 97-3252 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJCEX010000043.1 Flavobacterium psychrophilum strain 8888 contig00043, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================== =============================== ================== 97 45 87.0 30 TG...T..C...-C................................ GCTTTTGCCACGAAGCTAGATATTGCAATA T [102] 173 46 100.0 30 .............................................. ACACCCCATTTGCTGTAACGCAAGTTTTCG 249 46 100.0 30 .............................................. TGCCGAATCAATATTTAAAATAGCTGTTAT 325 46 100.0 30 .............................................. ACAAGGCATAACAGTCGTTTCGCTCAATGT 401 46 100.0 29 .............................................. TATTACGCTATCTAATCCCGAACGTGTCG 476 46 100.0 30 .............................................. TTACAATTTTAGATTTTACCTCCGAAACAT 552 46 100.0 30 .............................................. CCTAATCTTTAAATTTAAAACAATGAATAC 628 46 100.0 29 .............................................. CAGATGTTTGCCAGCAGTTCGGCTTCCGT 703 46 100.0 30 .............................................. ATCTCGTATGCGAACCTGTTACCTTACATT 779 46 100.0 29 .............................................. ACACTCTCTATTTTCGCTCGCATACGAGC 854 46 100.0 30 .............................................. ACAGCGGTCTATTCGTGGTGTTTGGTTTAA 930 46 100.0 30 .............................................. TGCATCAGCCATCTGTCCGAGTTCCAAATC 1006 46 100.0 30 .............................................. TTTGACATTATGTTTCAAGAACACATTTTG 1082 46 100.0 30 .............................................. CATATAAAGCCCCGCAACAATATAAACATA 1158 46 100.0 30 .............................................. TTTTCGGATAAATGGAACGATACAGCTATT 1234 46 100.0 30 .............................................. TTTGCAATTACAAAGAGCCTCTATGATGGC 1310 46 100.0 31 .............................................. TATGCTGGGTGTTGATTTAAGAACGGATAAG 1387 46 100.0 30 .............................................. GATGTCTTGCGACTATCTCCACTAGCATCA 1463 46 100.0 30 .............................................. AAAAACGAAATACATACAGCGCACGCATTC 1539 46 100.0 29 .............................................. TCCATTTCTTAATACATTTTTTAATTTAT 1614 46 100.0 30 .............................................. AAAAAACACCTGCTTTTTTCTTCTAATTCT 1690 46 100.0 30 .............................................. TATACGTAAAAGCACTTTAATATGGGACTT 1766 46 100.0 30 .............................................. CTACCTGCGTGTTTGAATATACATTACCAC 1842 46 100.0 30 .............................................. TTCGATTTACAAATTCTTATGATGGCTCTT 1918 46 100.0 29 .............................................. GAGATAGTAGATGCTTTTCTCGATAGAGT 1993 46 100.0 29 .............................................. GTAGATGACGCAACTATGTCAAGGTTTTT 2068 46 100.0 30 .............................................. TTAGAACTGAATATGCAAAATACAGAACTT 2144 46 100.0 30 .............................................. ATTATTGTCACGCTTCACGTCTAATGTTTC 2220 46 100.0 30 .............................................. TCCGTTGTAGTCTTCAACAAATATCGTCCA 2296 46 100.0 30 .............................................. ATAAAATGGTAACAATTACAACAACAACAG 2372 46 100.0 30 .............................................. TTATCATAACAAAAATATGAAAAAACAAGA 2448 46 100.0 30 .............................................. AAGACGTAAATACAAGCATGACATCGCAGT 2524 46 100.0 30 .............................................. CTCGTTTTTAGATCATGCGAATTTCTTTCT 2600 46 100.0 30 .............................................. TACTATGAGCTTGTAACTCCAAGATTTTAC 2676 46 100.0 30 .............................................. CGCAGGCGTTTGTTAAGATTCAAGCGGGGC 2752 46 100.0 30 .............................................. AATGTGTTTTTTTTTAGTACGTTCATCGTT 2828 46 100.0 30 .............................................. TTTAATTATGCAATTTTCCTTAAACAACCT 2904 46 100.0 29 .............................................. ACGGTAATTTTAAAAAGTGTTGTGATGTA 2979 46 100.0 30 .............................................. TATTTGGAGATACTTATATTCTGGGAACTA 3055 46 100.0 30 .............................................. AATAAACTCCGTACGTTTGCATCATTAATC 3131 46 100.0 30 .............................................. GTATTACGCAACGACTTAATAACTTAGTCG 3207 46 100.0 0 .............................................. | ========== ====== ====== ====== ============================================== =============================== ================== 42 46 99.7 30 GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC # Left flank : TGTAAATATATAAAATGTTAAAAAGTTATTTCCGAAAATTTTTGAGCTTTTTGAATTAGCTCAAATTTTCAGAATAACTTTTTAACTTACACACTTT # Right flank : ACGCTTGCCGATAACGTCCCGCAGCTTGGCGATGTGGCGGATTAAGGAAGCCTAAACTTTCGGTTAAACACTGACTTTGCAAGTACAAAACCAACTTCAAATTAAGCCTAAACCCGCCATATTGCCAAACTGCTGTTATATGACGCCCTTTTTTTTTTCATTCCATTTGGCGATTGCTATTATTCTATTTGCGGAAGCTATATTTCTAATTGCGGTTGTCATATTTCTTTCTGCGGATTGAATAATTCTAAATGCGGTTGAAATAAATCTAAACGCAAATAAGATAAAACTTATTGCGGTAGCAATAAGTTTGTTTGCGAAACAAACAATTCTTTTTGCGTTTAGTATATTTCTTTCTGCGGTTTGCATATTCTTAAATGTGGGGTGTACTTTTCTGTTTTGGGTTATGTTATTTTTTCGCTTTCTTAAATTCTATTCCTTTTACTTGTGCAAATTCTGGGCTTGATGC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.91%AT] # Reference repeat match prediction: F [matched GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.00,-0.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.41 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], // Array 1 381-11502 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJCEX010000025.1 Flavobacterium psychrophilum strain 8888 contig00025, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================== =============================== ================== 381 46 100.0 30 .............................................. ATTATAATCACATAGGAGTTATGTCGGTTA 457 46 100.0 30 .............................................. AAGAAAGAGTGAAAAGATGTGTGAGAACAT 533 46 100.0 30 .............................................. ATGACGGATAGTGGTGCATTTACGTTCTTC 609 46 100.0 30 .............................................. ATAACGCCATCTTGCTACGATGGTCTTTAC 685 46 100.0 29 .............................................. ATTGAGAGATTTGGGAACATAGTCAAAGC 760 46 100.0 30 .............................................. ATTCGAAGACTACAACGAAACTATAACAAT 836 46 100.0 31 .............................................. GACTTACCTGCAGAACGAAACATCTCACCCA 913 46 100.0 30 .............................................. CAATAAATTGGCGGGTGTAATGCTATGAAT 989 46 100.0 30 .............................................. AATGAATAGAGATGCACCCAACGAGATTAT 1065 46 100.0 30 .............................................. TTGATAATATAGATAGTAAACTTACCAGCA 1141 46 100.0 30 .............................................. TTTGACGTAAACCTTGTGGCATCTGAATCT 1217 46 100.0 30 .............................................. TTTTGCCTAAAAAACCAGTCAAGTACGAGA 1293 46 100.0 30 .............................................. CTTCTGTTGTTTAAGATGTTTTCAAACACA 1369 46 100.0 30 .............................................. TACGGTGGCAACTGAAGCTAACACGGTTGC 1445 46 100.0 30 .............................................. ATACCTGCAATAACATTAAACCACCTATTC 1521 46 100.0 30 .............................................. TCGTTGTTGGTTTGCGACTCTTGTGGGTTT 1597 46 100.0 30 .............................................. TAGGGTAGATGAAGAAAAAAGAGATTTCTC 1673 46 100.0 30 .............................................. AGAAAGAAATGAGTTCATGTTCAATCAGTA 1749 46 100.0 30 .............................................. AGCAAGCACAACGCCAACGACAACCGAAGA 1825 46 100.0 30 .............................................. GTTTAATAGAGGTTTAATTTAGATGGCAGA 1901 46 100.0 30 .............................................. TTGATGGTGGATATTCTGGAACATCAAATA 1977 46 100.0 30 .............................................. TTCGAGGCTATTTTATAAGAAGATATTTCA 2053 46 100.0 29 .............................................. CTCACAAGTATAATCTAACGCAACAGCTT 2128 46 100.0 30 .............................................. AACTTTAAATTTATCACTATGAAAACTGAT 2204 46 100.0 30 .............................................. TTTGTTTGTTTATTCCGACCGTTGGATTGT 2280 46 100.0 30 .............................................. GAATGGTTTAGAACGATAAATATTGCAGGC 2356 46 100.0 30 .............................................. GCTACCCACAGAATTAAAAGTGTTCAAAGA 2432 46 100.0 30 .............................................. ACAACAGACGGCGAACTCGGTACGCTAATC 2508 46 100.0 30 .............................................. CTTTCAATGAATTACTGCACGGGAAAATAA 2584 46 100.0 30 .............................................. CGACTTATATTTGTCAAAGAAATAACAATT 2660 46 100.0 30 .............................................. GAAGTATTAAATTTGATTTAATATGGACAG 2736 46 100.0 30 .............................................. TGGGTCAGAATTAGTACTAGGCACAAGTGC 2812 46 100.0 30 .............................................. TTTAACCGTATCTTTGTTCGTGTTTATTCG 2888 46 100.0 30 .............................................. AATAGTATGTTTGATCATACCACTTTAATA 2964 46 100.0 30 .............................................. CTACTTGCGTGTTTGAATAGACGTTGCCAC 3040 46 100.0 30 .............................................. TGTTGTTCGTGAAGGATTCTCAATTGACAC 3116 46 100.0 30 .............................................. CAATAGAGATGTTTTTTTAAGGCTATCGGA 3192 46 100.0 30 .............................................. AATTTATCAATCCAACAGGACAAGGATTTC 3268 46 100.0 30 .............................................. TTATGGGGTAACTTCTATATGGAATGCTAC 3344 46 100.0 30 .............................................. TTTGTTTGTTTATTCCGACCGTTGCATTGT 3420 46 100.0 30 .............................................. TGGAAACGTTGTCAATACCTGAATGGGTAG 3496 46 100.0 29 .............................................. ATAATTTTACCATACCTTTACAGAGTAAT 3571 46 100.0 30 .............................................. CCGTTCGGTGGCAGTTTCAAGACCGAAGTT 3647 46 100.0 29 .............................................. TAGATTTTAATCATATATCTTTGTTCTAA 3722 46 100.0 30 .............................................. ACATCAAAACTGTCGTCTATCGACAATTGA 3798 46 100.0 30 .............................................. ACAGCGAACCTAAACTTCATTTCGGTCGCA 3874 46 100.0 30 .............................................. AGCAAAAATAAAGGCATTAATAACAAGTTT 3950 46 100.0 29 .............................................. AAAGACCTATCCGAGCAGTTCAATCCAGA 4025 46 100.0 30 .............................................. TTTTTGGGCGTGGCTTGTCGTTGTCGCCAA 4101 46 100.0 29 .............................................. CTTAACCGCATAATGAAAATGGGGACAAC 4176 46 100.0 30 .............................................. TGCTTTCTAACAAATAAAAACAAAACATTA 4252 46 100.0 30 .............................................. CTTTTAGCGTGGTTGAATCTTTAACCACGC 4328 46 100.0 29 .............................................. GGTTCTAAAAGTGCCACGCCAGAATCTTC 4403 46 100.0 30 .............................................. TACATTTTAATCATATATCTTTGTACTCAA 4479 46 100.0 30 .............................................. ATAAAATGATAGAAATTACAACAACAACAA 4555 46 100.0 30 .............................................. ATTGGACGGAGAACGATTGGAAACAATTTT 4631 46 100.0 30 .............................................. TATTGTATTACGTGATTTTGCGGTTACCTA 4707 46 100.0 30 .............................................. ATATGGAAATTAATATTACATTTGCTTCAT 4783 46 100.0 30 .............................................. CTCGACGACTTATTTATTTGGGGGAGTGCT 4859 46 100.0 30 .............................................. GTTTAGGTACTTAACATTGTTGTCGCCACG 4935 46 100.0 31 .............................................. CAATTGGATTTGCCTTATACTGCTTTCTTGT 5012 46 100.0 30 .............................................. AAATTATTTTAATGAACTTAAACGAGTTTC 5088 46 100.0 29 .............................................. GCGTATCAAATCGGTTTTTCGCAATATTA 5163 46 100.0 30 .............................................. GCGGGGTTAAAGCCAGTCGATAGTGGGGTA 5239 46 100.0 30 .............................................. CATTGAGAGATTTGGGAACATAGTTAAAGC 5315 46 100.0 30 .............................................. GTTTCTAAAATTGCTTTATCCGATTTAAAG 5391 46 100.0 29 .............................................. CCAAAGCAAACTAATTGCGCTTGAACAGA 5466 46 100.0 30 .............................................. TCGGGAAGTAATGCAGGTTCGCCAATGATA 5542 46 100.0 30 .............................................. TTTTAATCAAAAAGTTCTTTTTCAGTTACC 5618 46 100.0 30 .............................................. TGTTCGTTATGGTTATGCCATATTCCTATG 5694 46 100.0 30 .............................................. AAGCGCAGTCTAGATGAAGAAGCTGCATAC 5770 46 100.0 29 .............................................. GCGTTATTTTTAATCATGTTGAATGGATT 5845 46 100.0 30 .............................................. TCCTGAATTATGAAGAACTGGCGAAAGGGA 5921 46 100.0 31 .............................................. ACAACGTTACGGAAGCTAGCGATAAGCACAA 5998 46 100.0 30 .............................................. CTGAATATATTTGGTATTTAGACGAACCTT 6074 46 100.0 30 .............................................. AAAACTAGAGTTTCAACGTTCAATTGACAG 6150 46 100.0 30 .............................................. GTGCTTTGCGAAGGTGGGGATTTCAAAGCA 6226 46 100.0 30 .............................................. ACGAAGAGGTTTACATCGAAGAACTTTTAG 6302 46 100.0 30 .............................................. ATAAAATCCTATTTGGTTTCTTTGGGAATG 6378 46 100.0 29 .............................................. CGGAATTTTGCGTGAAGCTGGCAAAAACA 6453 46 100.0 30 .............................................. CTATCTCGCACTCGATAGATGAGAGGCAAG 6529 46 100.0 29 .............................................. TTCCTGAATGGGTAGTAAAAACAAAAGCT 6604 46 100.0 30 .............................................. TGCTGGTTTGGTTATTCCTGTTTCGTACGC 6680 46 100.0 30 .............................................. AGAAGACGGTTCTATGTATTGGCTAACGCA 6756 46 100.0 30 .............................................. AAACCGCATTATTAAACCAAGAGATAGCGG 6832 46 100.0 30 .............................................. TGTACCCTCGTAATACTTTGATTTCACATG 6908 46 100.0 29 .............................................. CATTTGAAGCAATACTTTCCACCCTGTCA 6983 46 100.0 30 .............................................. AACTGGTGGCAACCAATCAAAGGCAACCGC 7059 46 100.0 29 .............................................. ATGTTCCGCTTGCAGAAGTAAAAGATTAG 7134 46 100.0 30 .............................................. TCCTGCCAACTGATGAACTTTGCGATTTTT 7210 46 100.0 30 .............................................. TTGCTTCCAACACCTACGCCTGCTGTAATT 7286 46 100.0 30 .............................................. CCCTAGGTCTATATGAATGAAGTTCTGTTT 7362 46 100.0 30 .............................................. ACTCAACATTCACTTTGTTTGTCAATGATA 7438 46 100.0 29 .............................................. CTTGAAAGATGAGGTCTTTTCGTCCCTTT 7513 46 100.0 30 .............................................. ATAACACTTATATTTTCAAAAAAGTATCAG 7589 46 100.0 29 .............................................. ACAATAAAGGAGAACTCATCATCAATTAA 7664 46 100.0 30 .............................................. ACTAGCCGATTATATTAGGTCGTATGCTAG 7740 46 100.0 29 .............................................. ACAAAGGATTGATTGTTAATGAAGCAAGC 7815 46 100.0 30 .............................................. ACATCTAAAAAAAGAGATAATGAACTTATT 7891 46 100.0 30 .............................................. TCATGTTGTTTTTTTGTTTAATTATTACTG 7967 46 100.0 30 .............................................. TCTTGCCGAAAACGAATTTACGCATGAAAT 8043 46 100.0 30 .............................................. CGTTTTGGCTTTTTTCAACAAGCCCGACAA 8119 46 100.0 29 .............................................. TTTAGATACAAATATACAATTAATATTTC 8194 46 100.0 30 .............................................. CCACAAAAAGTACTCACGTTTGAAACCGTT 8270 46 100.0 30 .............................................. AAAAATAGTTTTTGCAGTAATAATTAAACA 8346 46 100.0 30 .............................................. TAATAAATAATTTAAGATTAATATTTTTTA 8422 46 100.0 31 .............................................. AATATGTAACTTGCGGATTGTTTCTTCATCG 8499 46 100.0 30 .............................................. TCAAAATCATTTTTTAAAACTTCAATACTG 8575 46 100.0 30 .............................................. ATTATTTTACAATTAAAATTCAAAAAAGTA 8651 46 100.0 30 .............................................. TTCGTAAAATTTATTAAAGGCACTTCAATG 8727 46 100.0 30 .............................................. TTGAGTTGATACGTTTTGCACCGTGCCATC 8803 46 100.0 30 .............................................. TTTTTTTATTAAATTATTACTGCAAAAACT 8879 46 100.0 30 .............................................. CGTTTTGGCTTTTTTCAACAAGCCCGACAA 8955 46 100.0 30 .............................................. TGAAACTATTGAGGTAACAAATGAAATGTA 9031 46 100.0 30 .............................................. GGTGTGTAGTCCGTTACTGCATACTTCACG 9107 46 100.0 30 .............................................. AAAACATTCAAGAAATTGAAGCGGAAGAAG 9183 46 100.0 30 .............................................. TGATAGTCGCCAAAACGGTTGTTAAGTCAG 9259 46 100.0 30 .............................................. AAGCAATAACATTACCTTTAGCATGGGGCT 9335 46 100.0 30 .............................................. TGTGCGTTGTCTATGCTTTTGTATGTAACG 9411 46 100.0 30 .............................................. TTATTTTCTTGAAAATAGCATTTAACACAT 9487 46 100.0 30 .............................................. CATATACGACCATCAAACACTTAGAAGAGT 9563 46 100.0 30 .............................................. TGTTCGTTATGGTTGTGCCATATTCCTATG 9639 46 100.0 30 .............................................. GCTTAATAATCTTTCAAACTGCTTTGATGG 9715 46 100.0 30 .............................................. AATAGCGTTAACATTCCTCCTGATCCTAAA 9791 46 100.0 29 .............................................. AGTTAAAACTTCGCTTTCTGCTTCTGTCA 9866 46 100.0 30 .............................................. TTTCCCGCAATAACATTTAACCACCTATTA 9942 46 100.0 30 .............................................. ACGAGTTCCATCTTGTCGAACTCGTTAATT 10018 46 100.0 29 .............................................. CTTTGTTTTTTTTGTTTCGTGGAGCAACT 10093 46 100.0 29 .............................................. AAACCAACAACGAGTTATAAACAATCCAC 10168 46 100.0 30 .............................................. TGAAGCAATTATCTGACCGTGCCAATGTTC 10244 46 100.0 29 .............................................. GCATCTAATTTTACGCACCAAGGAAATCC 10319 46 100.0 30 .............................................. TTACATTGATTTAATTGCGGAAGATATTGT 10395 46 100.0 30 .............................................. TTTCACTTGGTCTGTCGTGTAACCACGGCT 10471 46 100.0 30 .............................................. TCATCTAACGCTTTTTGCGAACCAAAATTA 10547 46 100.0 30 .............................................. TTCGCTGCTATATTTCAGTAGCGGAAAAAA 10623 46 100.0 30 .............................................. TTGTTTAATAGAGGTTTAATTTAGATGGCA 10699 46 100.0 31 .............................................. GTGTGTTTAATTCTCTCTATTTTCTTAGACA 10776 46 100.0 30 .............................................. CTTATTGGACTAGCAGGACGTGATGTTTCT 10852 46 100.0 30 .............................................. GTTAGATAATGGTACGCAATGGATAGCATA 10928 46 100.0 30 .............................................. AAAAGCGTTTATCGTTTCTTCTAACCTGAA 11004 46 100.0 30 .............................................. TGGGAGCAGAAAATAAAGTTTTGATTACTT 11080 46 100.0 30 .............................................. AATGATTACAACGCTTATTCGTTTTCTCAT 11156 46 100.0 30 .............................................. TAAAATCGGCTTCAATTACATTAAAATTAG 11232 46 100.0 29 .............................................. TCGATGAACAAAGAGACTGTTTTGTTTCG 11307 46 100.0 29 .............................................. TACCCAATTTGTAAAGAGAAATCAACCCG 11382 46 100.0 29 .............................................. AGCGTAGTCTCGACGAAGAAGCCGCTTAC 11457 46 100.0 0 .............................................. | ========== ====== ====== ====== ============================================== =============================== ================== 147 46 100.0 30 GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC # Left flank : AATTATTTTTGAAGTCAATTTCGTAATATGAAATTATACTAAAATTTACTGATTTTGAAGAAGTGCAATTTGAGTGTCCGCATTTTCCGCCACAACTATTGTCTTTGTCTTGTGAGTCTTTCTTTTTGCAACAGTTTTTCTTTTCAGTTTTGGAAGTTTTTTCTTTTTTGCAACACGATTTCTCGGTTTTAGTTCCACACGCATAACTCAAAGTTGGCGACAAAAAGAAGCCAAGTGTTAGAATTATAATTAGTATGTGTAACTGTTTTTTCATTTTGCAAATATAAGATGTAATTCTGAAAATATATGTTAATTTTTAGTAGTATTTTTTCTTCGGTTCGTGTAGCTCAAGGGTGTCATATAACTAATAGATTTGTCCCG # Right flank : CATACCGCGAGTTAATCGTTTGATATGTTGGTGGTTATATGCTTATTTTGAAATTAAAAAACAGTTCTGTTTGTGTGTTGATATTCTGGTAGGTCTAATATTTCTAAATCCTATTTTTCAAAAAAGTTCTAATTGTTGAGAAGGTTTGTCTGTTTCTACAGGTTTTTTTCCATAAAAAAGCTCCATCATACCAAATTGTTTATCGGTTATTTGCATCACACCAATTTTGCCGTGTTCGGGCAAACTATTTCTTATTCTTTTGGTGTGTACTTCGGCATTTTCTCTGCTGGCACAAAACCGCATATAGATCGAAAATTGAAACATAGAAAAACCATCGTCCAATAATTTCTTGCGAAATTCACTGGCAATTTTACGCTCTTTCCGCGTTTCGGTGGGCAGGTCAAAAAATACTAATATCCACAAACTTCTATACTGGTTTAAACGGGTGTAATGTTCGTCATACATAAATAGGGTATAAAATTTTTCTTGCGGCTCCCGCA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.91%AT] # Reference repeat match prediction: F [matched GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.00,-0.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [63.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //