Array 1 410697-410302 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR732370.1 Micrococcus sp. 116 isolate Micrococcus sp. 116, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 410696 29 100.0 32 ............................. CAGCTGGTCAAGGACAAGCGCGAGCTTGACCA 410635 29 96.6 32 .....................G....... ATGTGCGCCTCGTCCACCAGCAGGTAGTCGAT 410574 29 100.0 32 ............................. TTCTGCGATGTGAACATCCCCGAGGGCAGTAC 410513 29 100.0 32 ............................. AAGCGTGACATCGTTGACCTGACACGCGGGCC 410452 29 100.0 32 ............................. ATCTCCAGCTCGCGCCGCTCACCGGTCTTCAT 410391 29 89.7 32 ...C..T.....................T GAGTGCATTTGGACAACGATGTCTCCGCAGCC 410330 29 96.6 0 ...C......................... | ========== ====== ====== ====== ============================= ================================ ================== 7 29 97.6 32 GGATGCCCCGCGCACGCAGGGATGAGCCC # Left flank : CGCGGCGAAGGCCGGCCTGAACCGGGCCATCCTGGACGCCGGCCTGGGCACGCTGCGAGCGCAGCTGCACTACAAGACCTCCTGGGCCGGATCCCAGGTGAAGATGATCGACCGATTCGCGCCGTCCTCGAAGACGTGCTCGCGCTGCGGGGCAGTCAAAGCCACGCTGTCCCTGCGCGAGCGCGTCTACGAATGCGAGGTTTGCGCCCTGGTGATCGACCGCGACGTGAACGCCGCGATCAACATCCGGGCGTGGGCCGTGCAGGAGGGCACGGGTCACCGGGTCGAGCTCGCCCAGGGCAATGGGGAGAGCCAAAACGGACGCCGAGCTGCTGGCCGGACCCCACCATCGGGTGGGCCCACCGGGTGGCAGCGCCGAAGCGTCAAGCCCGCACCGCGCGGTGCGGGCAGATCCAGCCGGGCAACTGGCTGGTCATCCCACACCCCTCACATCGAGCGGGAACACGCGGAAGCGGACGTATTCGGCCCAGTCAGGTAGA # Right flank : TTCCCCCACTGGTCGATGACACCCGGTGGCGGTGTCGTCTCAGAAGGTGTCGGGGGTGGGGCTCTCGTCGGTGTCGGCGGCGTAGAGGACGGCTTGGGTGCGCTCGAGCAGGTAGGTGAGCTGGAGTAGGTGCTTGGCCGGCTCGGGGACCGTCCAGGCGTGGGCGTCGGGGTGGTAGCTGCCGCCGATCTCGCGGACGCGCCGCTGCTCGTACTTGAACCGGTGCGAGGGCTTGCTGGCCTTGTAGCGCGGGGGTAGGCGGACCCACACGGTGAGATCGGAATCCAGGGCCGCGGCGGGTAGGTCGTCGGCAGTCAGCTCGTGCATGGCCGGCATCCTCCCAACTGGACGTGCCCGACATGGTGGGCGCACCAGGGGCCGCGCATGCTCGGGCGCCGATGGCTGGGGAGGCTTATCGCGTCGGGGGCCCGGTGTAGGGTCTGGGGCTGCTGGTCTGGTGGAGGAGGGGAAGCCTTCCACCAGGCCAGCACTGCTTTGCC # Questionable array : NO Score: 6.14 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGATGCCCCGCGCACGCAGGGATGAGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-9.90,-6.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [33.3-38.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA // Array 2 2096672-2095759 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR732370.1 Micrococcus sp. 116 isolate Micrococcus sp. 116, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================================= ================== 2096671 36 100.0 35 .................................... TGCAGCGCCGGGTCCACGCACTGCGCCCCATACGC 2096600 36 100.0 35 .................................... GTGTGAGCGCCGCGCGTGCCCCACCGATCCGCGAC 2096529 36 100.0 38 .................................... CCGGAGCCGCCTGTGGGTGTGCTCACGGCGGAGTGGCT 2096455 36 100.0 36 .................................... GCCAAACCCGTGGTGTGCCCCGCCGTCGAGCCGCTT 2096383 36 100.0 36 .................................... CCGCGTGGAGCCGTCGTCGCCCACCGTGGGCGCGTG 2096311 36 100.0 37 .................................... TGGCGGGACTACCAGGGCGTCTGGCATCTCGGCCCCC 2096238 36 100.0 37 .................................... AACCCCCACGCCGACCCGTGGTCCCCCCACTACGACG 2096165 36 100.0 34 .................................... CCGTCACGAGTGGAGGTTGACGGAAAGTTCACTG 2096095 36 100.0 36 .................................... ACGCCGATGACGACGAGGAGCCCGCCGGTGGGGCCG 2096023 36 100.0 38 .................................... GGGTCGCGGGTGCGGAGCATCACGACGGAGGACGTCCG 2095949 36 100.0 36 .................................... GTGTCCGTCCTCCGCTTCCACATCGACTCCGGGAAG 2095877 36 100.0 49 .................................... GGCGACGGCATGGGTGGCAAGGGGTCCAACGGCGTCAGTCTCAGCTCGG 2095792 34 88.9 0 .............-.................-..CG | ========== ====== ====== ====== ==================================== ================================================= ================== 13 36 99.1 37 GTCTCCGCTCCTTTGGGGAGCGGACTTCGTTGAGGC # Left flank : GTTGAGTGCCCGGGATCGTCTCCGGAGGCGGCTCATCGCCTATGACATTCCTGACGACCGCCGCAGATCCCGGGCGGCCCGCGTCCTCGAAGGGTACGGAGATCGAGTCCAATATTCGGTCTTCGTGGTGGATGCCTTGCCCGCCCAGTTCGTCTCCCTCCAGGCAGCCCTCGAAGCGGTGCTGGATCCGGGCGAGGACAGCGTGCTGGTCTGCGACCTCGGCCTGACGGCCACGCTTGGCGCAGAGCAGTTCAGCTTTCTGGGTCGATCACGCGAGATCACTGTGGATGGGCCCATCATCATCTGAAGCGACCCAGGGACCTTCGCGAGGGCTCCGTCGATGTCCGGAATCCGGCGAGCCGTCGCATCAGAAAAGGGCTTGTCAGCCCACGGTTTATGGGCCGAGGCCGATAAGCAGGGCGCTTCACGGATGCCTCTTGAGCCCAGGGCTCGCCGAAGGTCGCGTCTGCCCATGTCAAAGGGCTGTAATCTGAGGTGCT # Right flank : CTCTAGGTCTGAGGCGGGGTAGGACTCAGGCCGCCTGCCTGCCCTGGTCAATTCGCTAGAGCGCGTCGAGGGGCGAGGCGCCTCGGCGGGGTCGACTCGCGGACATGACGTCCCCGAGCGTGGTGACGCGTTCTCGAGGCCTTGGATGTGGCTCCACGGAGTGGGCATCAGCAGCAAATCTGCTGTCTCGAGGCCAAGGCTGTGTGCGAGTCGGGGGACTGCCACGCCCTGGGCCAATGCTCGGCGCATGGCGTTACGTGCTGTCCCGCGTTGAAGTTCATCGGGCATCTCCACTGCCCGCATGCGCGACCGGCGCGCAGCCAGCTGCAACAAATTTTCGGCGACGGGCGCGGTCTATATCAACGGGGCCGTCTAACCCTCGGGAAGCAGTCGGTCCCGTCTCGCCCCTCACACCACCAGGGACAGGAACGCGCCGAGCGCGAAGCCGACCACGGTGAGCAGCCCGGCCTTCTCCCCGCCCTTCTCGCGGGCCTCGGGGA # Questionable array : NO Score: 3.20 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCCGCTCCTTTGGGGAGCGGACTTCGTTGAGGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [10,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-9.60,-11.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [36.7-38.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA //