Array 1 11551-7162 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAEHL010000018.1 Flavobacterium ajazii strain SSM4.2 NODE_18_length_99878_cov_163.687809, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 11550 36 97.2 30 ...................................G TGCAATCGAAAACTCAGTTCAAAAGGACTG 11484 36 97.2 30 ...................................G TCGCCTGTTGCTACATAGTGTATGTCGTAT 11418 36 97.2 30 ...................................G GATAGCGTTTAGCTTTCTGTCAACAATACC 11352 36 100.0 30 .................................... TTTCATAATCCTTTCTTCGAATCAATTTTA 11286 36 100.0 30 .................................... TTTTTTATGGTTTTAAAACCAAGCGTACAA 11220 36 100.0 30 .................................... AAGTAAAAAAGAAGGTTGGATATCAACCGA 11154 36 100.0 30 .................................... TTAATGAATTCAACTGTTTCTAACTGATAA 11088 36 100.0 30 .................................... TTCTTGCTTCACGCCCTTTGTTATTGTTTT 11022 36 100.0 29 .................................... CAATTACGCAAACTGGTAGAGATACGATC 10957 36 100.0 30 .................................... ATTGCTTCTACGAACGATGTTCCAGAAGGA 10891 36 100.0 30 .................................... GAATATACCAATAAAGGACTTGGTTTGGTA 10825 36 100.0 30 .................................... TTTTTTCCTATTTCTAATTTGTTCATTTGT 10759 36 100.0 30 .................................... AAAATCGCCGAGCTTGCTTTAGGGTTTGGC 10693 36 100.0 30 .................................... TCTAAGAGTTGGAAAAATAAGACCTTCACG 10627 36 100.0 30 .................................... TCCCGGAGTTCCAAAATGTACGCCTCGGCG 10561 36 100.0 30 .................................... TTGTTAGGGCATTTGGTTATAAAACCTACC 10495 36 100.0 30 .................................... TTCGTCGGCACAAAGCCACGGCCCATCCTG 10429 36 100.0 30 .................................... CGTCTGTAAAGAACACGTGAGCTATATCCC 10363 36 100.0 30 .................................... TTTCACATCTTCGAGAAACTCGGATATTTC 10297 36 100.0 30 .................................... CTCCTGATCCACCAAGGCCTTGCGTTGCTC 10231 36 100.0 30 .................................... CGTCTCGGTCGGTTCATACTTGCCGTGATA 10165 36 100.0 30 .................................... ACCGAGGGGACAACGTGGGACCGCAAAGGC 10099 36 100.0 30 .................................... AGCGATGACGTCGAATGGATGACAGAATTA 10033 36 100.0 30 .................................... TTCATTAATTGCATTTGTGTTATTGCTGTT 9967 36 100.0 30 .................................... TCGGGGGGAGATATTAACGCTAAAGGTTAT 9901 36 100.0 30 .................................... AGGTGGTTTTGGTGATATAATTATGAATCC 9835 36 100.0 30 .................................... AATAAATTCCCTGTGTCAATCGTCGTTAGC 9769 36 100.0 30 .................................... TTGACCCCAAGACAGGATTAAAAGCCCCTT 9703 36 100.0 30 .................................... GAATGTCGTTAACATCACGGGTTAAATAGC 9637 36 100.0 30 .................................... GCGGCCGTTTTCTTTTTATCCTGTAGCTCT 9571 36 100.0 30 .................................... TTTCACATCTTCGAGAAACTCGGATATTTC 9505 36 100.0 30 .................................... GACCCGGTTACGGGGGCTTATCCTTTAGCG 9439 36 100.0 30 .................................... GCAATTACGCAAACTGGTAGAGATACAATT 9373 36 100.0 30 .................................... GCGTCGAAAATGTATTTTTAAACATTAGCC 9307 36 100.0 30 .................................... GTAGTAATTACAACTCCTATTATGACGTAC 9241 36 100.0 30 .................................... TTAGCTGGTCGCGAATCTCTTTTAGCTCCT 9175 36 100.0 30 .................................... TCGCCTAATATTGAAAAGTAGGTACCGGTT 9109 36 100.0 30 .................................... GTTTCGAAACCTCATAAAACTGAGATCTGA 9043 36 100.0 30 .................................... TTAACGTTCGCTTTCCCTACCGCCGTTTCT 8977 36 100.0 30 .................................... GGGGCATAACGGATGTGTTTCTGTCCGGTT 8911 36 100.0 30 .................................... AGAGCGGGGAAAATAATGAGCTATCTAAAT 8845 36 100.0 30 .................................... AAAACAATATAATTTGTATGGTGATTTATT 8779 36 100.0 30 .................................... TCGTTGAAAAGCGGAGCGAACAGGTCAATG 8713 36 100.0 30 .................................... AAAATGACGTTCAATAGCAGAACGTTTAAC 8647 36 100.0 30 .................................... AAAAGAAAAGGAAGCACAATAACAACAATA 8581 36 100.0 30 .................................... AAAATGACGTTCAATAGCAGAACGTTTAAC 8515 36 100.0 30 .................................... AAACATCCTCAGCCCATTTAATCAAAAACT 8449 36 100.0 30 .................................... ACGCAGTAGCCGTTAAGAAAATAGATAAGG 8383 36 100.0 30 .................................... ATTAGGGCTTTACCCTCTGCGCTCTTACCC 8317 36 100.0 30 .................................... AAAATGACATTCAATAGCAGGACGTTTAAT 8251 36 100.0 29 .................................... TCCGAGAAAGATGGAGAAAAAGGACGGGA 8186 36 100.0 30 .................................... GGTCGTAGGTCATTGTCATCTGTAACGCCT 8120 36 100.0 30 .................................... TCAAACGTAGGGATTTATGGGCCTAACGGT 8054 36 100.0 29 .................................... TGGTTTAGGATTGACCGACGTGCACATGT 7989 36 100.0 30 .................................... TACTTAAACATAAGAGGATTAGGACAGGCA 7923 36 100.0 30 .................................... TTGTCATAGCTAAGGTACTACAACAACCCC 7857 36 100.0 30 .................................... CCACGACCCCCATAAACTTGGTAGTATCTG 7791 36 100.0 30 .................................... TTCGAGCCGCCGTAGGCTATATCGTTAACC 7725 36 100.0 30 .................................... CGCTGGTAACGTCGAGCTTATCGCCGTATT 7659 36 100.0 30 .................................... GTTCCTCATTCTTGTTGGGCATATAAGATC 7593 36 100.0 30 .................................... GCCGCAGCGAGCGCCATTTTCGGCGAAAGT 7527 36 100.0 30 .................................... GGGGCATAACGGATGTGTTTCTGTCCAGTT 7461 36 100.0 30 .................................... ACATCGACGCAAAAAGCGCAGATCGTACAA 7395 36 100.0 30 .................................... TTTCACATCTTCGAGAAACTCGGATATTCC 7329 36 100.0 30 .................................... TGTCGTTCTCGTCTACCAGCGTAGGCGATC 7263 36 100.0 30 .................................... GATACGCTGCACAAAGCCAGACCACGTGAA 7197 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 67 36 99.9 30 GTTGTGGTTTGATTAAAGATTAGAAAACACGATATC # Left flank : AATAGAAATTGATAAACCAGCCCCTAAAGAACTTATATTAACTTTTCAGGAAAACGATATGTTTTTGTTAGGGATTTCTAATGATGAGTACAATGACAATAAACTAGACCATACTTTTTTAAGTAATTATTTGTATCGGGTTCAGAAAATTTCAGATGGAGATTATTCGTTTAGGCACCATATTGCATCAACAGTTACAAATAAAATGGAGGAGATTAGAATAACAAGTATGAAAAAGTATCACGAGATGAATCCAATAAAAGTAGAAATTTCTGTCTTAGGAAAAATTTCAAAAATGTAATCTCATTTTAAAATTTCGGTGCAAATTTACACCAATCTATATTACTTGTTATATTAGCGACGATTTAGTTGAGATTGTTACAATGATTAGGAGACAGGATCATTAAAAGTTCATTGACATAAGCTTTTCAAATGCTTAAACCTTTTAAACCAGAACTGAAAGGTATCGCATCCGCCCAGCAGGGATACAGCAGCTTTAA # Right flank : AGTTGGCTTGTTTCCTTCTGATAATCATGGAATTAAATTGAATTATCGTGTAAAAAAATGCTTCTTTTTTGGATTGATAACCCAGGATTGAAGCATTTTTTTATTTGTAATAATTTGTGATTCAGTATTTTTATGATGAAAAATTTGATTGGTTTTGAGAAGGGGCAGGTCGCGACCTGCCTGTACAGATATGCATGTTTGTTGAATGTCCGTGCAGATGCAATTATAAATTGATTGATAATGAAAAATAGAAAAAGAAACAGAATGCAGGGATTCGATTATTCCAGCGATAATTTATATTTCGTCACGATATGTGTTCAGGATAGAATATGTTGTTTTGGATACGTGGGGACGGTAGGGACAGGTCGCGACCTGTCCGTACATCATTCCAATGAAAATCATTCCAATGAAAATCATTCCAATGAAAATCATTCCAATGAAAATCATTCCAATGAAAATATCATTCCAATGAAAATCATTCCAATGAAAATCATTCCAAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGGTTTGATTAAAGATTAGAAAACACGATATC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: R [matched GTTGTGGTTTGATTAAAGATTAGAAAACACGATATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [71.7-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.87 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //