Array 1 248943-251531 **** Predicted by CRISPRDetect 2.4 *** >NZ_UIYW01000003.1 Klebsiella pneumoniae strain EuSCAPE_DK013, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 248943 29 100.0 32 ............................. GAGCAGGCACCCGCCGCAACGACGAAGAGCGC 249004 29 100.0 32 ............................. AAATCAGCCAGCACCACGATTCTGGGAAATTT 249065 29 100.0 33 ............................. GAAACCCCATCAGATGACCCTCCCCATGTTGGC 249127 29 100.0 32 ............................. TTGCCTGGTCTGCTTGGTGATGATCCGTGGTA 249188 29 100.0 32 ............................. TACAGAACGACTGAGGCGGCGTGTATTGCATA 249249 29 100.0 32 ............................. GATCTTAACTCTATTGCCAATGGCGCAATTCA 249310 29 100.0 32 ............................. GGCGATGCGCGCTCTGCTGGCTATCGGTAAAA 249371 29 100.0 32 ............................. AATGCAGCAACCGGCAAATATATCGCCGGTAA 249432 29 100.0 32 ............................. GGGCTGCCGCACGCCTGGGACGAGTCGAGCCC 249493 29 100.0 32 ............................. CCGCAATAACAAAAATAAATGAGGGTTAAAGT 249554 29 100.0 32 ............................. GTAAATGGGAATGAGTAGAAGAGCGTCATTGG 249615 29 100.0 32 ............................. CCCCCGCGCACATGCTTAAACGCGCTATCACG 249676 29 100.0 32 ............................. GGCATCTGTTGTGTAATGTTGAGTTTTTTTCA 249737 29 100.0 32 ............................. CAGGTTAAACATGTAAAAAATGACCGTCGCCG 249798 29 100.0 32 ............................. CACATTGCCCGGTCTGAAAAGTATTTGAAAAT 249859 29 100.0 32 ............................. TCCGCACAGTCAAACGCTCCAGACACCAACCC 249920 29 100.0 32 ............................. CCGGAACACCACCAGTAACAGCTACTGTAGGC 249981 29 100.0 32 ............................. TGACCCTGTTGATTTTGTTCCAGGTAATACGT 250042 29 100.0 32 ............................. TTAACCTCGTCGTTCTGGTTTCCGCCCAGGAT 250103 29 100.0 32 ............................. GAACCTGAATTCGAAGGGTGGGTCATCCTTCC 250164 29 100.0 32 ............................. GGACCCCGAGCGACCCGGTCACCCTCCGACCT 250225 29 100.0 32 ............................. CCGTCGAACGGCGGTTATATCCATCTTGAGTC 250286 29 100.0 32 ............................. ACCGATCCCACAATTGCGGCGGTTGAGATTGA 250347 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 250408 29 100.0 32 ............................. CCGATTGTCTGGCGGTCGAGCGCCATTTGCTC 250469 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 250530 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 250591 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 250652 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 250713 29 100.0 32 ............................. CCCTCCGCTTTCAGGGTGTGGCTGATATCACC 250774 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 250835 29 96.6 32 .............A............... TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 250896 29 100.0 32 ............................. ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 250957 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 251018 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 251079 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 251140 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 251201 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 251262 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 251323 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 251384 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 251445 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 251503 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 43 29 99.4 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCCTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : CGTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //