Array 1 59053-60602 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADRGM010000003.1 Fusobacterium sp. DD28 JD40_2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 59053 36 100.0 30 .................................... TAAACTTCTTTGCAAATTCTTGTAAGTCCA 59119 36 100.0 30 .................................... CGGGTATGGAAGTAAGATATTAGATACAGA 59185 36 100.0 30 .................................... TAGATTGTAATTTTAATTCCTGCTTGTAAG 59251 36 100.0 30 .................................... AGCATAGAATTATTTATTAAGTATACCAGC 59317 36 100.0 30 .................................... AGAACGTAAGGACTTTACGTTGGAAGATAG 59383 36 100.0 30 .................................... ATAGATGGACTTATGAAGATGACCTTATAA 59449 36 100.0 30 .................................... ACCAAAATACATAATTATAAAAATGCCAAT 59515 36 100.0 30 .................................... AAAGCAAGAATTAGATAAAATAAAAAAAGA 59581 36 100.0 29 .................................... TTTAGGATTTTTTCCTAACAACCACTGTA 59646 36 100.0 29 .................................... AGATTTACATAAAGAAGAACAATATAAGA 59711 36 100.0 29 .................................... CAGTTTTATTTATGAACTTAGGTTTATAT 59776 36 100.0 30 .................................... TTTATCCCTCCTTAGAGTCTTAAATCTACA 59842 36 100.0 30 .................................... GAAAACAATTGGGTGGAGAACAAGGAAGCG 59908 36 100.0 30 .................................... GGTAAGGCTACTGATTCAACCTACTTAGAT 59974 36 100.0 30 .................................... GTCCTAGATTTTCCATGTCTAGGTGGCATA 60040 36 100.0 30 .................................... ACAATTATTTATATATATATGCGGAAGAGT 60106 36 100.0 30 .................................... CAGTGGCAAAACCTAATTCACGACAAATAA 60172 36 100.0 30 .................................... TATCTGCCGACAATTAAAATTGTATGACCT 60238 36 100.0 30 .................................... AAATAACAAAACTTCTTTAGAGTTGAACTT 60304 36 100.0 30 .................................... TTTTGGAAAAGCTGTAAGTGAATATAATGC 60370 36 100.0 29 .................................... TTGCTTGGGTTTCAGTGTCAAATTTAAGT 60435 36 100.0 30 .................................... GAAGATGGAACAAATGAACTTGTCGGAGTT 60501 36 100.0 30 .................................... TAATAATTTTATGCAACTATATAACCACCT 60567 36 94.4 0 ...............G..................C. | ========== ====== ====== ====== ==================================== ============================== ================== 24 36 99.8 30 GTTTTAGTACCTTGTAATATTTGAGTATGGTAAAAC # Left flank : TTGTATTTCCAGAAAATAAAATTGCTTTAAAGGATATGCCAAAATTGCGAAATTTTTTGTTTGAATTGTCTAAAGAGAATAAAGTAATAGTGGCAACTTTTTCTAAATATCTTTTTGATTTTTCAACTTTGGATAATATTAATATTTATATTAATTCAAAATTAGCAAATTCTTTTACAGAAGATGAGATAATAAACGAAATTTATGAAAATTATCCGGTATTGAAGTCAAAAAATGAAATAAATGCTCTTCTATCTTTTGTATTAAAAAATTATTTATCTGATGTTTTACTTGGAAACATAATTACTAATAAATTTTTCTGTGAATTAGATAATGTTTTTATTGAAAATTATGAATTTATCTTCTTGCTCCTTTATTATTTAAAAAAGATAAGATTGAGTTATAAACTTAACTTGAACTATGATCCGACCTCTCCATTTTCGAACTATATAGAAGAAAAACTTTTAACATAATGTGATATATGTTAGAATAGATTTGAG # Right flank : CCAAGGAAAAAAGGTTCAGAACTAAGCGTCTGAACCTTTTGTTATTTTTCAACTATTAAAGAATAATCTTCTGGAGTATCTATATCTAAGAACTCCTGAGAATATGGAAAATCAACAAGAGAAACAAGTGGAGTATTTCTAATTATATTTTTTCCACCATGGTCACCTTGAAGAGCAAGAAGCTCTTCTTTTTTACTATATGGAAAGAATACAGGTGAATATCTATCTCCATTACTTGTTGGAACAGTTATATATCCATATTTTTCAAAGTTATAATAGAGTTTTGAAATAGTATCTGGTGTCAAAAAGACCTGGTCACCAGTAAAAAATACAAAACCTTTTCCTGAAGAGTTTTGAACTCCTAATTTAATACTTTCACTCTGTCCTAAATTTGCTTTGGTGTTGTGAAGATACTTACAATTATATTTTTTACAAATATTTTCAGTCCAGCTGTCCCTTCCACATACCAGTATTTCAAAAAAGTTGGCGAAATTAAGTTT # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGTACCTTGTAATATTTGAGTATGGTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.50,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 1 20777-23036 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADRGM010000026.1 Fusobacterium sp. DD28 JD40_25, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 20777 30 100.0 36 .............................. AGGAATAAAAGAAAGTTACAAAATGCCAGATACATT 20843 30 100.0 37 .............................. GATGTATTCCCAAATACAAGAATAAAGTACGGAGAAG 20910 30 100.0 36 .............................. TGATTAGAATCACAATTTGTGTTATAAACATGCCCA 20976 30 100.0 37 .............................. TAAGCATAAATTATTTACTATTGATAACACAGGAAAT 21043 30 100.0 37 .............................. GTGATTGCGTTTCTGATGTCTATATACTTCATTTATC 21110 30 100.0 36 .............................. TATTAAATACGGAGAAGCTAGTATGAACAAATGGGC 21176 30 100.0 36 .............................. TCTGTAATTGTTCCTTCTATAAGATATGCACAAAAC 21242 30 100.0 36 .............................. AGTTAATTATGCAGTAATAGAAAGCAATAATGGTGG 21308 30 100.0 34 .............................. AGACAATGGAAAAAGTTTACAAGAGAATGGGAGT 21372 30 100.0 35 .............................. AAAAAAGGAGGATTAAAAATGTGGAGATGTAAAGA 21437 30 100.0 37 .............................. GATATAATACGCACGGAGAAATAGAACTTAAACTCAC 21504 30 100.0 36 .............................. TTTTAAAATGGAAAGTCATCCACTCCAATATCCTCA 21570 30 100.0 36 .............................. CAGGAAATAGCAGTGGAGTTGCACTAGGCTTTAAAC 21636 30 100.0 36 .............................. ACTTTATTAAAGAAAATAAATGCTAATGCAGATACA 21702 30 100.0 36 .............................. TAGTCTACTCTATGAGCTTTCACAGTATCTTTTATT 21768 30 100.0 36 .............................. TAAAAGGTCTATTTACTGCTAAAGAAAATCTGATAT 21834 30 100.0 36 .............................. TAAAAGGTCTATTTACTGCTAAAGAAAATCTGATAT 21900 30 100.0 35 .............................. TTGCAATCTTCCAAGTCCTTTTTAAGTTCTGAAAG 21965 30 100.0 35 .............................. TTGGGGATGCAACAAGAAAGAGTCTATATTTGGAA 22030 30 100.0 36 .............................. AGTTTTAGTTGTAACTCATATTGATAAAAAGCATAT 22096 30 100.0 36 .............................. TGCCAGAATTTAGGCTTATTGAGCACGAAAAAACGG 22162 30 100.0 36 .............................. TCTTTTCCAAACTTTTCTTCTGTTATTTTTTCAAGC 22228 30 100.0 35 .............................. TGGCAGTTAATATCTTTTAAATCCTTATTATAAAA 22293 30 100.0 34 .............................. TATTCTTTCATTGCAGCTTCCATCACATGTGCAC 22357 30 100.0 35 .............................. TGGCAGTTAATATCTTTTAAATCCTTATTATAAAA 22422 30 100.0 36 .............................. TCATCCGAATTAGTCATCTCATCTGTCCACCCCATC 22488 30 100.0 35 .............................. CAAAAATACAGAAGTCTTTACAATACTGATGGAAT 22553 30 100.0 35 .............................. TCTTCTGTTTTTCCCTCGTATTCATCAATTTTTTC 22618 30 100.0 34 .............................. CTTGATGAATTAAATAATATATTACAGCTAAACT 22682 30 100.0 36 .............................. CAAAATAATAAAGAAATTGAAAAGTTATCTATTAAA 22748 30 100.0 35 .............................. CTTAAAGCAGATTTTAAACCAACAGAAAAAGAAGT 22813 30 100.0 34 .............................. TAAACATACTTGATACAACTGCATTCATTAGTTC 22877 30 100.0 35 .............................. TTTAGAGTTTTCAGAGTCTCCAATGTTTCACTTCT 22942 30 100.0 35 .............................. GTAGTAACACGAGGGCTCTTTAGTTTATCAACAAA 23007 30 93.3 0 ..............CA.............. | ========== ====== ====== ====== ============================== ===================================== ================== 35 30 99.8 36 ATTGAATAATTACATTGGTAGTATTTAAAT # Left flank : AGAATTCTATCCTTTTAACATCAAGGAGAAGATTTAATGAGTAGGAATAGATATAATTTTAACTATATTTTTCTTTTTTATGATGTAAATGAAAAAAGAGTAAATAAGATTTTTAAAGTATGTAAAAAATATTTAACACATTATCAGAGATCTGTTTTTAGAGGAGAAATAACACCAGGTAATCTTCTAAAATTAAAAAATGAGGTAAGGAAAGTTATTAATGAAAAAGAGGACTCTGTATGTATAGTCAAATTTATAAATGATAGGTATTTTGCAGAAGATACACTAGGAGTGCTATGGAAAGAAGATGAAGATTGTTTTATATGAGTTTTCCAAGTGGAAAAATAAAAAAAACTTTGAAATCCTCATAAAATAATTGTTTGCAACGAAAAATATAGAATATTGAAAATTTGATGTGAGGTTGGAAAAAAATTGAGGCATTCCTTAAAATATGGTATATTGAAAGAAAGTTGTGATTTCAGAGTAAGCTGATTATGACC # Right flank : TATACTTCACCTAAAAACTTACACAACTAAGAAGGACGGTGGAGTTTTTTAGTTTTAAGAACAGAGATTATTTTTATTCTAAAAGAGGCCTATATGTGGTATAATTAAAACATTGAAATAGAAGTAGGAAGTGAAATGATGGGAAAAATTATTTATTTTACAGGTGGAGCTAGAAGTGGAAAAAGCTCTAAAGCTGAAGGGTATATTTTTGCAAGAAATTATACTAAAAAAATATATGTTGCAACAGGTATAGCTTTTGATGAAGAGATGAAAGCTAGAGTAAAAAAACACCAAGAACAACGAGGCAATAACTGGTTGACAATTGAAGGATATAAAGACCTTGTAGAAAAAATAAAACCTCATGTTGAAGCAGGTGGGGTAATTCTTTTAGATTGTTTAACAAATATGGTAACAAATTTGATGATAATGGATAAAGAGTATGACTGGGATAAAATTTCAGTTGAAGAGGTTGAACAGTTGGAAAAGGAAATTACTGATAC # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGAATAATTACATTGGTAGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:83.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.80,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //