Array 1 84228-83345 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_PUDZ01000012.1 Escherichia coli strain YH17131 NODE_12_length_88113_cov_94.5127, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	=============================	================================	==================
     84227	    29	 100.0	    32	.............................	TTACCGCTCTACGCCGCCCCGCCAGCGCTGGT	
     84166	    29	 100.0	    32	.............................	AGCAGCCAGTGCCGGTAGTGCCTGGTGATGGT	
     84105	    29	 100.0	    32	.............................	GGACAATGTGAAAAGCTTAATATTCATTACAT	
     84044	    29	 100.0	    32	.............................	TACAGTTTCCATAAATTCACCTCGTTTATATA	
     83983	    29	 100.0	    32	.............................	ATCGGACGATGGCGATCGCAATCGCGCGGGAA	
     83922	    29	 100.0	    32	.............................	AGGACGAAACGACCGGAAAACTGGCGACGGGC	
     83861	    29	 100.0	    32	.............................	CGTCCGCGGCTGCAACTGATGCCGGGGCTTAT	
     83800	    29	 100.0	    32	.............................	CGTCCGCGGCTGCAACTGATGCCGGGGCTTAT	
     83739	    29	 100.0	    32	.............................	AACCTTGTCGGGTCGCCCGTGCGTCATGATGA	
     83678	    29	 100.0	    32	.............................	AGTTCCCACAAACCTGGGTGCATCTCGCGTTC	
     83617	    29	 100.0	    32	.............................	ACTGCAAAGTTCTTCACGCTGGTTTTTATGCA	
     83556	    29	 100.0	    32	.............................	GGATATAGAGCGGGTACTCGAGCGAAGCGGGG	
     83495	    29	 100.0	    32	.............................	CCAGGACAGGCCGTGACGGTTGCCATTGAGTC	
     83434	    29	 100.0	    32	.............................	TTTTTGTTCTCTTCAAAACGCCGAACAACCAA	
     83373	    29	  93.1	     0	............T.....A..........	|                               	
==========	======	======	======	=============================	================================	==================
        15	    29	  99.5	    32	GAGTTCCCCGCGCCAGCGGGGATAAACCG	                                	       

# Left flank :   CGTGCTTGCTGCTGGAGAAATACAACCGCCGGCCCCACCTGAAGATGCACAGCCTGTTGCCATTCCGCTTCCCGTTTCTCTGGGAGATGCCGGACATCGGAGTAGCTGAGATGAGTATGTTGGTCGTGGTCACTGAAAATGTACCTCCGCGCTTACGAGGCAGATTAGCCATCTGGTTGTTGGAGGTACGTGCAGGGGTATATGTAGGTGATGTATCCGCAAAAATTCGTGAAATGATCTGGGAACAAATAGCTGGACTGGCGGAAGAAGGCAATGTAGTGATGGCATGGGCAACGAATACGGAATCGGGATTTGAGTTCCAGACATTTGGGGTAAACAGGCGTACCCCGGTAGATTTGGATGGTTTAAGGTTGGTATCTTTTTTACCTGTTTGAAAACAAAGAATTAGCTGATCTTTAATAATAAGGAAATGTTACATTAAGGTTGGTGGGTTGTTTTTATGGGAAAAAATGCTTTAAGAACAAATGTATACTTTTAGA
# Right flank :  GACGCACTGGATGCGATGATGGATATCACTTGGAGTTCCCCGCCCCTGCGGTAGAACTCCCAACTCCCATTTTCATACCCATCAAGACGCCTTCGCCAGCTCCTTCACCAGCGGTAGCATTATCCGCATAACATCACGGCAGCGACGTTCTATTCTTCCTGGAAGTGCCTTATCAATATGTTGTTGATTATCCAGTCTTACGTCATGCCAGCTATTTCCCGCAGGGAATGCAGCTGTTTTTGCGCGTTGCTGATAACCATCCTTATTCCCAAGATTCCAATTTGTTGCTTCTACCGAAAGTACGGCAATACCGGCTTTGTCGAAAACTTCGGCGTCATTACAACAGCCAGTACCCTTCGGATAATTTTTATTCAAACCCGGATTGGTCGTTGCGGCAATTCCATGACTACGCGCAATTGCCAGTGCCCTGTCGCGCGTTAATTTCCTTACTGCTTCAGGGGTTTTTACACCACTGTTGAAATACAATTTATCGCCAACAA

# Questionable array : NO	 Score: 6.23
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GAGTTCCCCGCGCCAGCGGGGATAAACCG
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [3,6] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GAGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-12.00,-13.50] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [2-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [41.7-70.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,5.92   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
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